; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh02G004720 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G004720
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionprotein SICKLE isoform X1
Genome locationCmo_Chr02:2547461..2550463
RNA-Seq ExpressionCmoCh02G004720
SyntenyCmoCh02G004720
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0035196 - production of miRNAs involved in gene silencing by miRNA (biological process)
GO:1903730 - regulation of phosphatidate phosphatase activity (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR039292 - Protein SICKLE


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605152.1 Peptidyl-tRNA hydrolase 2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]4.9e-19697.98Show/hide
Query:  MRMEASQADVANYIETSLPNHLSNPLVESSANMLGQSEPCTAPRFDYYTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDAYVPSHLNSSPDVYVPSNFP
        MRMEASQADVAN++ETSLPNHLSNPLV+SSANMLGQSEPCTAPRFDYYTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDAYVPSHLNSSPDVYVPSNFP
Subjt:  MRMEASQADVANYIETSLPNHLSNPLVESSANMLGQSEPCTAPRFDYYTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDAYVPSHLNSSPDVYVPSNFP

Query:  GMRNPEMSPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPGPPPRGMNSPRGPFVNQFPSQLPRDMSSPSFVSG
        GMRNPEMSPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPGPPPRGMNSPRGPFVNQFPSQLPRDMSSPSFVSG
Subjt:  GMRNPEMSPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPGPPPRGMNSPRGPFVNQFPSQLPRDMSSPSFVSG

Query:  PRGNSYPNQTHDMVNHLSPSPSPGYQGSSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLEDPWKVLQPGIWRPVAPLRSSA
        PRGNSYPNQT DMVNHLSPSPSPGYQGSSSPGGGSHGHRGNMTPSPRFGSGRGFGSHG RFSSDESSRPEQFYNPSMLEDPWKVLQPGIWRPVAPLRSSA
Subjt:  PRGNSYPNQTHDMVNHLSPSPSPGYQGSSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLEDPWKVLQPGIWRPVAPLRSSA

Query:  NPSESWISKFNTKKARVSDASSGRSGSQPSLAEYLAASFNEAANNTP
        N SESWISKFN+KKARVSDASSGRSGSQPSLAEYLAASFNEAANNTP
Subjt:  NPSESWISKFNTKKARVSDASSGRSGSQPSLAEYLAASFNEAANNTP

XP_022947202.1 protein SICKLE isoform X1 [Cucurbita moschata]5.2e-206100Show/hide
Query:  MEESEKRRERLRAMRMEASQADVANYIETSLPNHLSNPLVESSANMLGQSEPCTAPRFDYYTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDAYVPSHL
        MEESEKRRERLRAMRMEASQADVANYIETSLPNHLSNPLVESSANMLGQSEPCTAPRFDYYTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDAYVPSHL
Subjt:  MEESEKRRERLRAMRMEASQADVANYIETSLPNHLSNPLVESSANMLGQSEPCTAPRFDYYTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDAYVPSHL

Query:  NSSPDVYVPSNFPGMRNPEMSPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPGPPPRGMNSPRGPFVNQFPSQ
        NSSPDVYVPSNFPGMRNPEMSPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPGPPPRGMNSPRGPFVNQFPSQ
Subjt:  NSSPDVYVPSNFPGMRNPEMSPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPGPPPRGMNSPRGPFVNQFPSQ

Query:  LPRDMSSPSFVSGPRGNSYPNQTHDMVNHLSPSPSPGYQGSSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLEDPWKVLQP
        LPRDMSSPSFVSGPRGNSYPNQTHDMVNHLSPSPSPGYQGSSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLEDPWKVLQP
Subjt:  LPRDMSSPSFVSGPRGNSYPNQTHDMVNHLSPSPSPGYQGSSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLEDPWKVLQP

Query:  GIWRPVAPLRSSANPSESWISKFNTKKARVSDASSGRSGSQPSLAEYLAASFNEAANNTP
        GIWRPVAPLRSSANPSESWISKFNTKKARVSDASSGRSGSQPSLAEYLAASFNEAANNTP
Subjt:  GIWRPVAPLRSSANPSESWISKFNTKKARVSDASSGRSGSQPSLAEYLAASFNEAANNTP

XP_022947209.1 protein SICKLE isoform X2 [Cucurbita moschata]4.9e-19696.67Show/hide
Query:  MEESEKRRERLRAMRMEASQADVANYIETSLPNHLSNPLVESSANMLGQSEPCTAPRFDYYTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDAYVPSHL
        MEESEKRRERLRAMRMEASQADVANYIETSLPNHLSNPLVESSANMLGQSEPCTAPRFDYYTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDA      
Subjt:  MEESEKRRERLRAMRMEASQADVANYIETSLPNHLSNPLVESSANMLGQSEPCTAPRFDYYTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDAYVPSHL

Query:  NSSPDVYVPSNFPGMRNPEMSPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPGPPPRGMNSPRGPFVNQFPSQ
              YVPSNFPGMRNPEMSPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPGPPPRGMNSPRGPFVNQFPSQ
Subjt:  NSSPDVYVPSNFPGMRNPEMSPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPGPPPRGMNSPRGPFVNQFPSQ

Query:  LPRDMSSPSFVSGPRGNSYPNQTHDMVNHLSPSPSPGYQGSSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLEDPWKVLQP
        LPRDMSSPSFVSGPRGNSYPNQTHDMVNHLSPSPSPGYQGSSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLEDPWKVLQP
Subjt:  LPRDMSSPSFVSGPRGNSYPNQTHDMVNHLSPSPSPGYQGSSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLEDPWKVLQP

Query:  GIWRPVAPLRSSANPSESWISKFNTKKARVSDASSGRSGSQPSLAEYLAASFNEAANNTP
        GIWRPVAPLRSSANPSESWISKFNTKKARVSDASSGRSGSQPSLAEYLAASFNEAANNTP
Subjt:  GIWRPVAPLRSSANPSESWISKFNTKKARVSDASSGRSGSQPSLAEYLAASFNEAANNTP

XP_023007497.1 protein SICKLE isoform X1 [Cucurbita maxima]2.4e-18792.1Show/hide
Query:  MEESEKRRERLRAMRMEASQADVANYIETSLPNHLSNPLVESSANMLGQSEPCTAPRFDYYTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDAYVPSHL
        MEESEKRRERLRAMRMEASQADVANY+ETSLPNHLSNPLVESSANMLGQSEPCTAPRFDYYTNPMAAFSSSKKRGNQTVSH            AYVPSHL
Subjt:  MEESEKRRERLRAMRMEASQADVANYIETSLPNHLSNPLVESSANMLGQSEPCTAPRFDYYTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDAYVPSHL

Query:  NSSPDVYVPSNFPGMRNPEMSPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPGPPPRGMNSPRGPFVNQFPSQ
        NSSPD YVPSNFPGMRNPEMSPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPGPPPR MNSPRGPFVNQFPSQ
Subjt:  NSSPDVYVPSNFPGMRNPEMSPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPGPPPRGMNSPRGPFVNQFPSQ

Query:  LPRDMSSPSFVSGPRGNSYPNQTHDMVNHLSPSP--------SPGYQGSSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLE
        LPRDMSSPSFVSGPRGNSYP+QT DMVNHLSPSP        SPGYQGSSSPGGGSHGHRGNMTPSPRFG GRGFGSHGRRFSSD+SSRPEQFY+PSMLE
Subjt:  LPRDMSSPSFVSGPRGNSYPNQTHDMVNHLSPSP--------SPGYQGSSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLE

Query:  DPWKVLQPGIWRPVAPLRSSANPSESWISKFNTKKARVSDASSGRSGSQPSLAEYLAASFNEAANNT
        DPWKVLQPGIWRPVAPLRSSANPSESWISKFNTKKARV DASSGRSGSQPSLAEYLAASFNEAANNT
Subjt:  DPWKVLQPGIWRPVAPLRSSANPSESWISKFNTKKARVSDASSGRSGSQPSLAEYLAASFNEAANNT

XP_023533680.1 protein SICKLE [Cucurbita pepo subsp. pepo]3.5e-20298.33Show/hide
Query:  MEESEKRRERLRAMRMEASQADVANYIETSLPNHLSNPLVESSANMLGQSEPCTAPRFDYYTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDAYVPSHL
        MEESEKRRERLRAMRMEASQADVANY+ETSLPNHLSNPLVESSANMLGQSEPCTAPRFDYYTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPD YVPSHL
Subjt:  MEESEKRRERLRAMRMEASQADVANYIETSLPNHLSNPLVESSANMLGQSEPCTAPRFDYYTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDAYVPSHL

Query:  NSSPDVYVPSNFPGMRNPEMSPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPGPPPRGMNSPRGPFVNQFPSQ
        NSSPDVYVPSNFPGMRNPEMSPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPGPPPRGMNSPRGPFVNQFPSQ
Subjt:  NSSPDVYVPSNFPGMRNPEMSPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPGPPPRGMNSPRGPFVNQFPSQ

Query:  LPRDMSSPSFVSGPRGNSYPNQTHDMVNHLSPSPSPGYQGSSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLEDPWKVLQP
        LPRDM SPSFVSGPRGNSYPNQT DMVNHLSPSPSPGYQGSSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLEDPWKVLQP
Subjt:  LPRDMSSPSFVSGPRGNSYPNQTHDMVNHLSPSPSPGYQGSSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLEDPWKVLQP

Query:  GIWRPVAPLRSSANPSESWISKFNTKKARVSDASSGRSGSQPSLAEYLAASFNEAANNTP
        GIWRPVAPLRSSAN SESWISKFNTKKARVSDASSGRS SQPSLAEYLAASFNEAANNTP
Subjt:  GIWRPVAPLRSSANPSESWISKFNTKKARVSDASSGRSGSQPSLAEYLAASFNEAANNTP

TrEMBL top hitse value%identityAlignment
A0A5D3C828 ACT11D09.53.4e-11865.67Show/hide
Query:  MEESEKRRERLRAMRMEASQADVANYIETSLPNHLSNPLVESSANMLGQSEPCTAPRFDYYTNPMAAFSSSKKRG---NQTVSHDYVPSHLNSSPDAYVP
        MEESEKRRERLRAMRMEA+QADV NYIETSLPNHLSNPLVESSA M+GQ  PCTAPRFDYYTNPMAAFS+SKK+G   NQ VS            D +VP
Subjt:  MEESEKRRERLRAMRMEASQADVANYIETSLPNHLSNPLVESSANMLGQSEPCTAPRFDYYTNPMAAFSSSKKRG---NQTVSHDYVPSHLNSSPDAYVP

Query:  SHLNSSPDVYVPSNFPGMRNPEMSPSAPHQFHQHSPDQR-FYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPGPPPRGMNSPRGPFVNQ
         H N+S   Y+P  FPG+RNPEMSPS+ HQFHQ+SPDQR FYARG S +GGHGSP MPRP+ ++Q  P+MW GPR                    PFVNQ
Subjt:  SHLNSSPDVYVPSNFPGMRNPEMSPSAPHQFHQHSPDQR-FYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPGPPPRGMNSPRGPFVNQ

Query:  FPSQLPRDMSSPSFVSGPRGNSYPNQTHDMVNHLSPSPSPGYQGSSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLEDPWK
        FP+  PR+M+S S VSGPRGNSY N T D   + S SP+PG+ GS SPG GSHGH GNMTPSPRFG GRG G HGR    D+S  PEQFYN SMLEDPWK
Subjt:  FPSQLPRDMSSPSFVSGPRGNSYPNQTHDMVNHLSPSPSPGYQGSSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLEDPWK

Query:  VLQPGIWRPVAPLRSSANPSESWISKFNTKKARVSDASSGRSGS-QPSLAEYLAASFNEAANNTPDS
        VLQP IW  +    +SA PSESWISKF TKKARVSD+SSGRS S QPSLAEYLAASF EA  + P++
Subjt:  VLQPGIWRPVAPLRSSANPSESWISKFNTKKARVSDASSGRSGS-QPSLAEYLAASFNEAANNTPDS

A0A6J1G5T4 protein SICKLE isoform X12.5e-206100Show/hide
Query:  MEESEKRRERLRAMRMEASQADVANYIETSLPNHLSNPLVESSANMLGQSEPCTAPRFDYYTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDAYVPSHL
        MEESEKRRERLRAMRMEASQADVANYIETSLPNHLSNPLVESSANMLGQSEPCTAPRFDYYTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDAYVPSHL
Subjt:  MEESEKRRERLRAMRMEASQADVANYIETSLPNHLSNPLVESSANMLGQSEPCTAPRFDYYTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDAYVPSHL

Query:  NSSPDVYVPSNFPGMRNPEMSPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPGPPPRGMNSPRGPFVNQFPSQ
        NSSPDVYVPSNFPGMRNPEMSPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPGPPPRGMNSPRGPFVNQFPSQ
Subjt:  NSSPDVYVPSNFPGMRNPEMSPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPGPPPRGMNSPRGPFVNQFPSQ

Query:  LPRDMSSPSFVSGPRGNSYPNQTHDMVNHLSPSPSPGYQGSSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLEDPWKVLQP
        LPRDMSSPSFVSGPRGNSYPNQTHDMVNHLSPSPSPGYQGSSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLEDPWKVLQP
Subjt:  LPRDMSSPSFVSGPRGNSYPNQTHDMVNHLSPSPSPGYQGSSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLEDPWKVLQP

Query:  GIWRPVAPLRSSANPSESWISKFNTKKARVSDASSGRSGSQPSLAEYLAASFNEAANNTP
        GIWRPVAPLRSSANPSESWISKFNTKKARVSDASSGRSGSQPSLAEYLAASFNEAANNTP
Subjt:  GIWRPVAPLRSSANPSESWISKFNTKKARVSDASSGRSGSQPSLAEYLAASFNEAANNTP

A0A6J1G649 protein SICKLE isoform X22.4e-19696.67Show/hide
Query:  MEESEKRRERLRAMRMEASQADVANYIETSLPNHLSNPLVESSANMLGQSEPCTAPRFDYYTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDAYVPSHL
        MEESEKRRERLRAMRMEASQADVANYIETSLPNHLSNPLVESSANMLGQSEPCTAPRFDYYTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDA      
Subjt:  MEESEKRRERLRAMRMEASQADVANYIETSLPNHLSNPLVESSANMLGQSEPCTAPRFDYYTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDAYVPSHL

Query:  NSSPDVYVPSNFPGMRNPEMSPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPGPPPRGMNSPRGPFVNQFPSQ
              YVPSNFPGMRNPEMSPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPGPPPRGMNSPRGPFVNQFPSQ
Subjt:  NSSPDVYVPSNFPGMRNPEMSPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPGPPPRGMNSPRGPFVNQFPSQ

Query:  LPRDMSSPSFVSGPRGNSYPNQTHDMVNHLSPSPSPGYQGSSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLEDPWKVLQP
        LPRDMSSPSFVSGPRGNSYPNQTHDMVNHLSPSPSPGYQGSSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLEDPWKVLQP
Subjt:  LPRDMSSPSFVSGPRGNSYPNQTHDMVNHLSPSPSPGYQGSSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLEDPWKVLQP

Query:  GIWRPVAPLRSSANPSESWISKFNTKKARVSDASSGRSGSQPSLAEYLAASFNEAANNTP
        GIWRPVAPLRSSANPSESWISKFNTKKARVSDASSGRSGSQPSLAEYLAASFNEAANNTP
Subjt:  GIWRPVAPLRSSANPSESWISKFNTKKARVSDASSGRSGSQPSLAEYLAASFNEAANNTP

A0A6J1KYW0 protein SICKLE isoform X11.2e-18792.1Show/hide
Query:  MEESEKRRERLRAMRMEASQADVANYIETSLPNHLSNPLVESSANMLGQSEPCTAPRFDYYTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDAYVPSHL
        MEESEKRRERLRAMRMEASQADVANY+ETSLPNHLSNPLVESSANMLGQSEPCTAPRFDYYTNPMAAFSSSKKRGNQTVSH            AYVPSHL
Subjt:  MEESEKRRERLRAMRMEASQADVANYIETSLPNHLSNPLVESSANMLGQSEPCTAPRFDYYTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDAYVPSHL

Query:  NSSPDVYVPSNFPGMRNPEMSPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPGPPPRGMNSPRGPFVNQFPSQ
        NSSPD YVPSNFPGMRNPEMSPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPGPPPR MNSPRGPFVNQFPSQ
Subjt:  NSSPDVYVPSNFPGMRNPEMSPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPGPPPRGMNSPRGPFVNQFPSQ

Query:  LPRDMSSPSFVSGPRGNSYPNQTHDMVNHLSPSP--------SPGYQGSSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLE
        LPRDMSSPSFVSGPRGNSYP+QT DMVNHLSPSP        SPGYQGSSSPGGGSHGHRGNMTPSPRFG GRGFGSHGRRFSSD+SSRPEQFY+PSMLE
Subjt:  LPRDMSSPSFVSGPRGNSYPNQTHDMVNHLSPSP--------SPGYQGSSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLE

Query:  DPWKVLQPGIWRPVAPLRSSANPSESWISKFNTKKARVSDASSGRSGSQPSLAEYLAASFNEAANNT
        DPWKVLQPGIWRPVAPLRSSANPSESWISKFNTKKARV DASSGRSGSQPSLAEYLAASFNEAANNT
Subjt:  DPWKVLQPGIWRPVAPLRSSANPSESWISKFNTKKARVSDASSGRSGSQPSLAEYLAASFNEAANNT

A0A6J1L0Q3 protein SICKLE isoform X21.2e-18792.1Show/hide
Query:  MEESEKRRERLRAMRMEASQADVANYIETSLPNHLSNPLVESSANMLGQSEPCTAPRFDYYTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDAYVPSHL
        MEESEKRRERLRAMRMEASQADVANY+ETSLPNHLSNPLVESSANMLGQSEPCTAPRFDYYTNPMAAFSSSKKRGNQTVSH            AYVPSHL
Subjt:  MEESEKRRERLRAMRMEASQADVANYIETSLPNHLSNPLVESSANMLGQSEPCTAPRFDYYTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDAYVPSHL

Query:  NSSPDVYVPSNFPGMRNPEMSPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPGPPPRGMNSPRGPFVNQFPSQ
        NSSPD YVPSNFPGMRNPEMSPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPGPPPR MNSPRGPFVNQFPSQ
Subjt:  NSSPDVYVPSNFPGMRNPEMSPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPGPPPRGMNSPRGPFVNQFPSQ

Query:  LPRDMSSPSFVSGPRGNSYPNQTHDMVNHLSPSP--------SPGYQGSSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLE
        LPRDMSSPSFVSGPRGNSYP+QT DMVNHLSPSP        SPGYQGSSSPGGGSHGHRGNMTPSPRFG GRGFGSHGRRFSSD+SSRPEQFY+PSMLE
Subjt:  LPRDMSSPSFVSGPRGNSYPNQTHDMVNHLSPSP--------SPGYQGSSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLE

Query:  DPWKVLQPGIWRPVAPLRSSANPSESWISKFNTKKARVSDASSGRSGSQPSLAEYLAASFNEAANNT
        DPWKVLQPGIWRPVAPLRSSANPSESWISKFNTKKARV DASSGRSGSQPSLAEYLAASFNEAANNT
Subjt:  DPWKVLQPGIWRPVAPLRSSANPSESWISKFNTKKARVSDASSGRSGSQPSLAEYLAASFNEAANNT

SwissProt top hitse value%identityAlignment
Q9SB47 Protein SICKLE1.6e-2436.09Show/hide
Query:  MEESEKRRERLRAMRMEA---SQADVANYIETSL-PNHLSNPLVESSANMLGQSEPCTAPRFDYYTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDAYV
        ME+SEKR++ L+AMRMEA   +  D     ETS+   HLSNPL E+S +   Q +     RFDYYT+PMAA+SS KK  N+T    Y+ S          
Subjt:  MEESEKRRERLRAMRMEA---SQADVANYIETSL-PNHLSNPLVESSANMLGQSEPCTAPRFDYYTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDAYV

Query:  PSHLNSSPDVYVPSNFPGMRNPEMSP-SAPHQFHQHSPDQRFYARGYSGSG-GHGSPAMPRPFPMDQRSPNMWGGP-RSPYVNHFPGPPPRGMNSPRGPF
        PSH  SSP   VP  FP    P + P S   ++   +    F+A  Y   G  H SP+   P       P  W    R P VNH    PP+ +  P  PF
Subjt:  PSHLNSSPDVYVPSNFPGMRNPEMSP-SAPHQFHQHSPDQRFYARGYSGSG-GHGSPAMPRPFPMDQRSPNMWGGP-RSPYVNHFPGPPPRGMNSPRGPF

Query:  VNQFPSQLPRDMSSPSFVSGPRGNSYPNQTHDMVNHLSPSPSPGYQGSSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLED
          + P     +M +  F  G RG SY N      N+   + + G  G++ P  G    RG        G    FG  G R   +  +  E+FY+ SM ED
Subjt:  VNQFPSQLPRDMSSPSFVSGPRGNSYPNQTHDMVNHLSPSPSPGYQGSSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLED

Query:  PWKVLQPGIWRPVAPLRSSANPSESWISK-FNTKKARVSDASSGRSGSQPSLAEYLAASFNEA
        PWK L+P +W+  +   SS++  ++W+ K    KK+  S+A+   S +Q SLAEYLAAS + A
Subjt:  PWKVLQPGIWRPVAPLRSSANPSESWISK-FNTKKARVSDASSGRSGSQPSLAEYLAASFNEA

Arabidopsis top hitse value%identityAlignment
AT4G24500.1 hydroxyproline-rich glycoprotein family protein1.1e-2536.09Show/hide
Query:  MEESEKRRERLRAMRMEA---SQADVANYIETSL-PNHLSNPLVESSANMLGQSEPCTAPRFDYYTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDAYV
        ME+SEKR++ L+AMRMEA   +  D     ETS+   HLSNPL E+S +   Q +     RFDYYT+PMAA+SS KK  N+T    Y+ S          
Subjt:  MEESEKRRERLRAMRMEA---SQADVANYIETSL-PNHLSNPLVESSANMLGQSEPCTAPRFDYYTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDAYV

Query:  PSHLNSSPDVYVPSNFPGMRNPEMSP-SAPHQFHQHSPDQRFYARGYSGSG-GHGSPAMPRPFPMDQRSPNMWGGP-RSPYVNHFPGPPPRGMNSPRGPF
        PSH  SSP   VP  FP    P + P S   ++   +    F+A  Y   G  H SP+   P       P  W    R P VNH    PP+ +  P  PF
Subjt:  PSHLNSSPDVYVPSNFPGMRNPEMSP-SAPHQFHQHSPDQRFYARGYSGSG-GHGSPAMPRPFPMDQRSPNMWGGP-RSPYVNHFPGPPPRGMNSPRGPF

Query:  VNQFPSQLPRDMSSPSFVSGPRGNSYPNQTHDMVNHLSPSPSPGYQGSSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLED
          + P     +M +  F  G RG SY N      N+   + + G  G++ P  G    RG        G    FG  G R   +  +  E+FY+ SM ED
Subjt:  VNQFPSQLPRDMSSPSFVSGPRGNSYPNQTHDMVNHLSPSPSPGYQGSSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLED

Query:  PWKVLQPGIWRPVAPLRSSANPSESWISK-FNTKKARVSDASSGRSGSQPSLAEYLAASFNEA
        PWK L+P +W+  +   SS++  ++W+ K    KK+  S+A+   S +Q SLAEYLAAS + A
Subjt:  PWKVLQPGIWRPVAPLRSSANPSESWISK-FNTKKARVSDASSGRSGSQPSLAEYLAASFNEA

AT4G24500.2 hydroxyproline-rich glycoprotein family protein1.1e-1231.04Show/hide
Query:  MEESEKRRERLRAMRMEA---SQADVANYIETSL-PNHLSNPLVESSANMLGQSEPCTAPRFDYYTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDAY-
        ME+SEKR++ L+AMRMEA   +  D     ETS+   HLSNPL E+S                                             N   D++ 
Subjt:  MEESEKRRERLRAMRMEA---SQADVANYIETSL-PNHLSNPLVESSANMLGQSEPCTAPRFDYYTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDAY-

Query:  VPSHLNSSPDVYVPSNFPGMRNPEMSP-SAPHQFHQHSPDQRFYARGYSGSG-GHGSPAMPRPFPMDQRSPNMWGGP-RSPYVNHFPGPPPRGMNSPRGP
          SH  SSP   VP  FP    P + P S   ++   +    F+A  Y   G  H SP+   P       P  W    R P VNH    PP+ +  P  P
Subjt:  VPSHLNSSPDVYVPSNFPGMRNPEMSP-SAPHQFHQHSPDQRFYARGYSGSG-GHGSPAMPRPFPMDQRSPNMWGGP-RSPYVNHFPGPPPRGMNSPRGP

Query:  FVNQFPSQLPRDMSSPSFVSGPRGNSYPNQTHDMVNHLSPSPSPGYQGSSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLE
        F  + P     +M +  F  G RG SY N      N+   + + G  G++ P  G    RG        G    FG  G R   +  +  E+FY+ SM E
Subjt:  FVNQFPSQLPRDMSSPSFVSGPRGNSYPNQTHDMVNHLSPSPSPGYQGSSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLE

Query:  DPWKVLQPGIWRPVAPLRSSANPSESWISK-FNTKKARVSDASSGRSGSQPSLAEYLAASFNEA
        DPWK L+P +W+  +   SS++  ++W+ K    KK+  S+A+   S +Q SLAEYLAAS + A
Subjt:  DPWKVLQPGIWRPVAPLRSSANPSESWISK-FNTKKARVSDASSGRSGSQPSLAEYLAASFNEA

AT4G24500.3 hydroxyproline-rich glycoprotein family protein1.1e-2536.09Show/hide
Query:  MEESEKRRERLRAMRMEA---SQADVANYIETSL-PNHLSNPLVESSANMLGQSEPCTAPRFDYYTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDAYV
        ME+SEKR++ L+AMRMEA   +  D     ETS+   HLSNPL E+S +   Q +     RFDYYT+PMAA+SS KK  N+T    Y+ S          
Subjt:  MEESEKRRERLRAMRMEA---SQADVANYIETSL-PNHLSNPLVESSANMLGQSEPCTAPRFDYYTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDAYV

Query:  PSHLNSSPDVYVPSNFPGMRNPEMSP-SAPHQFHQHSPDQRFYARGYSGSG-GHGSPAMPRPFPMDQRSPNMWGGP-RSPYVNHFPGPPPRGMNSPRGPF
        PSH  SSP   VP  FP    P + P S   ++   +    F+A  Y   G  H SP+   P       P  W    R P VNH    PP+ +  P  PF
Subjt:  PSHLNSSPDVYVPSNFPGMRNPEMSP-SAPHQFHQHSPDQRFYARGYSGSG-GHGSPAMPRPFPMDQRSPNMWGGP-RSPYVNHFPGPPPRGMNSPRGPF

Query:  VNQFPSQLPRDMSSPSFVSGPRGNSYPNQTHDMVNHLSPSPSPGYQGSSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLED
          + P     +M +  F  G RG SY N      N+   + + G  G++ P  G    RG        G    FG  G R   +  +  E+FY+ SM ED
Subjt:  VNQFPSQLPRDMSSPSFVSGPRGNSYPNQTHDMVNHLSPSPSPGYQGSSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLED

Query:  PWKVLQPGIWRPVAPLRSSANPSESWISK-FNTKKARVSDASSGRSGSQPSLAEYLAASFNEA
        PWK L+P +W+  +   SS++  ++W+ K    KK+  S+A+   S +Q SLAEYLAAS + A
Subjt:  PWKVLQPGIWRPVAPLRSSANPSESWISK-FNTKKARVSDASSGRSGSQPSLAEYLAASFNEA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAATCCGAGAAACGGAGGGAGCGACTGAGAGCAATGCGAATGGAAGCTTCGCAGGCTGATGTCGCTAATTATATCGAAACTTCTCTGCCTAATCATCTT
TCCAATCCATTGGTTGAGTCCTCAGCTAACATGCTTGGGCAATCAGAACCATGTACCGCCCCAAGATTTGATTATTACACAAACCCTATGGCTGCATTTTCTTCT
AGCAAGAAGAGAGGGAATCAGACTGTGTCTCATGATTATGTTCCTTCCCACCTCAATAGTTCTCCAGATGCTTATGTTCCTTCCCACCTCAATAGTTCTCCGGAT
GTTTATGTTCCATCAAATTTTCCAGGAATGAGAAACCCTGAAATGTCTCCCTCTGCGCCTCATCAATTCCATCAACATTCACCTGACCAGAGATTCTATGCACGA
GGTTATAGTGGATCTGGTGGCCATGGTAGCCCAGCAATGCCCAGGCCTTTTCCTATGGATCAAAGAAGTCCTAATATGTGGGGTGGACCTAGAAGCCCATATGTC
AACCACTTTCCCGGCCCTCCCCCAAGGGGGATGAACTCCCCCAGAGGCCCTTTTGTCAACCAATTCCCTAGCCAGCTACCAAGGGATATGAGCTCACCCAGCTTT
GTCTCTGGACCAAGAGGTAATTCTTACCCCAATCAAACGCATGACATGGTTAATCACCTCAGTCCAAGTCCTAGTCCTGGATATCAAGGCAGTTCTAGTCCTGGT
GGAGGCAGCCATGGTCATCGTGGCAATATGACCCCTAGTCCAAGATTTGGCTCGGGACGAGGTTTTGGTTCTCATGGTCGTCGTTTTTCATCAGACGAATCATCT
AGACCAGAACAGTTTTACAATCCATCCATGCTTGAAGATCCCTGGAAGGTTCTGCAACCTGGTATTTGGAGGCCAGTTGCTCCATTGAGAAGTTCTGCCAACCCT
TCAGAATCTTGGATTTCAAAATTCAATACGAAAAAAGCAAGAGTTTCAGATGCTTCTTCTGGCAGGTCAGGCTCTCAACCCAGCCTCGCCGAGTATCTCGCTGCT
TCCTTCAACGAAGCAGCCAACAACACACCAGATTCTTATTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAATCCGAGAAACGGAGGGAGCGACTGAGAGCAATGCGAATGGAAGCTTCGCAGGCTGATGTCGCTAATTATATCGAAACTTCTCTGCCTAATCATCTT
TCCAATCCATTGGTTGAGTCCTCAGCTAACATGCTTGGGCAATCAGAACCATGTACCGCCCCAAGATTTGATTATTACACAAACCCTATGGCTGCATTTTCTTCT
AGCAAGAAGAGAGGGAATCAGACTGTGTCTCATGATTATGTTCCTTCCCACCTCAATAGTTCTCCAGATGCTTATGTTCCTTCCCACCTCAATAGTTCTCCGGAT
GTTTATGTTCCATCAAATTTTCCAGGAATGAGAAACCCTGAAATGTCTCCCTCTGCGCCTCATCAATTCCATCAACATTCACCTGACCAGAGATTCTATGCACGA
GGTTATAGTGGATCTGGTGGCCATGGTAGCCCAGCAATGCCCAGGCCTTTTCCTATGGATCAAAGAAGTCCTAATATGTGGGGTGGACCTAGAAGCCCATATGTC
AACCACTTTCCCGGCCCTCCCCCAAGGGGGATGAACTCCCCCAGAGGCCCTTTTGTCAACCAATTCCCTAGCCAGCTACCAAGGGATATGAGCTCACCCAGCTTT
GTCTCTGGACCAAGAGGTAATTCTTACCCCAATCAAACGCATGACATGGTTAATCACCTCAGTCCAAGTCCTAGTCCTGGATATCAAGGCAGTTCTAGTCCTGGT
GGAGGCAGCCATGGTCATCGTGGCAATATGACCCCTAGTCCAAGATTTGGCTCGGGACGAGGTTTTGGTTCTCATGGTCGTCGTTTTTCATCAGACGAATCATCT
AGACCAGAACAGTTTTACAATCCATCCATGCTTGAAGATCCCTGGAAGGTTCTGCAACCTGGTATTTGGAGGCCAGTTGCTCCATTGAGAAGTTCTGCCAACCCT
TCAGAATCTTGGATTTCAAAATTCAATACGAAAAAAGCAAGAGTTTCAGATGCTTCTTCTGGCAGGTCAGGCTCTCAACCCAGCCTCGCCGAGTATCTCGCTGCT
TCCTTCAACGAAGCAGCCAACAACACACCAGATTCTTATTTTTGA
Protein sequenceShow/hide protein sequence
MEESEKRRERLRAMRMEASQADVANYIETSLPNHLSNPLVESSANMLGQSEPCTAPRFDYYTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDAYVPSHLNSSPD
VYVPSNFPGMRNPEMSPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPGPPPRGMNSPRGPFVNQFPSQLPRDMSSPSF
VSGPRGNSYPNQTHDMVNHLSPSPSPGYQGSSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLEDPWKVLQPGIWRPVAPLRSSANP
SESWISKFNTKKARVSDASSGRSGSQPSLAEYLAASFNEAANNTPDSYF