; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh02G004880 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G004880
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionDNA-directed RNA polymerase subunit beta
Genome locationCmo_Chr02:2673407..2675092
RNA-Seq ExpressionCmoCh02G004880
SyntenyCmoCh02G004880
Gene Ontology termsGO:0006351 - transcription, DNA-templated (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
GO:0032549 - ribonucleoside binding (molecular function)
InterPro domainsIPR007642 - RNA polymerase Rpb2, domain 2
IPR007645 - RNA polymerase Rpb2, domain 3
IPR015712 - DNA-directed RNA polymerase, subunit 2
IPR037034 - RNA polymerase Rpb2, domain 2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AHM89620.1 RNA polymerase beta subunit [Lagenaria siceraria]7.6e-23398.78Show/hide
Query:  MQEQTIFIGNIPLMNSLETSIVNGLYRIVISQILQRPDIYYQSELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLRE
        MQEQTIFIGNIPLMNSL TSIVNGLYRIVISQILQ P IYY+SELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLRE
Subjt:  MQEQTIFIGNIPLMNSLETSIVNGLYRIVISQILQRPDIYYQSELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLRE

Query:  ILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHL
        ILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHL
Subjt:  ILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHL

Query:  IGLKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTPLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKL
        IGLKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTPLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKL
Subjt:  IGLKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTPLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKL

Query:  SYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVATGNSLALNPGIQE
        SYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVATGNSLALNPGIQE
Subjt:  SYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVATGNSLALNPGIQE

Query:  EQIVPARYHQ
        EQIVPARY Q
Subjt:  EQIVPARYHQ

AHM89856.1 RNA polymerase beta subunit [Lagenaria siceraria]7.6e-23398.78Show/hide
Query:  MQEQTIFIGNIPLMNSLETSIVNGLYRIVISQILQRPDIYYQSELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLRE
        MQEQTIFIGNIPLMNSL TSIVNGLYRIVISQILQ P IYY+SELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLRE
Subjt:  MQEQTIFIGNIPLMNSLETSIVNGLYRIVISQILQRPDIYYQSELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLRE

Query:  ILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHL
        ILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHL
Subjt:  ILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHL

Query:  IGLKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTPLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKL
        IGLKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTPLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKL
Subjt:  IGLKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTPLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKL

Query:  SYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVATGNSLALNPGIQE
        SYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVATGNSLALNPGIQE
Subjt:  SYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVATGNSLALNPGIQE

Query:  EQIVPARYHQ
        EQIVPARY Q
Subjt:  EQIVPARYHQ

QZL38585.1 RNA polymerase beta subunit [Citrullus naudinianus]7.6e-23398.78Show/hide
Query:  MQEQTIFIGNIPLMNSLETSIVNGLYRIVISQILQRPDIYYQSELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLRE
        MQEQTIFIGNIPLMNSL TSIVNGLYRIVISQILQ P IYY+SELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLRE
Subjt:  MQEQTIFIGNIPLMNSLETSIVNGLYRIVISQILQRPDIYYQSELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLRE

Query:  ILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHL
        ILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHL
Subjt:  ILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHL

Query:  IGLKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTPLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKL
        IGLKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTPLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKL
Subjt:  IGLKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTPLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKL

Query:  SYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVATGNSLALNPGIQE
        SYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVATGNSLALNPGIQE
Subjt:  SYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVATGNSLALNPGIQE

Query:  EQIVPARYHQ
        EQIVPARY Q
Subjt:  EQIVPARYHQ

YP_009751982.1 RNA polymerase subunit beta [Cionosicys macranthus]7.6e-23398.78Show/hide
Query:  MQEQTIFIGNIPLMNSLETSIVNGLYRIVISQILQRPDIYYQSELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLRE
        MQEQTIFIGNIPLMNSL TSIVNGLYRIVISQILQ P IYY+SELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLRE
Subjt:  MQEQTIFIGNIPLMNSLETSIVNGLYRIVISQILQRPDIYYQSELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLRE

Query:  ILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHL
        ILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHL
Subjt:  ILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHL

Query:  IGLKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTPLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKL
        IGLKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTPLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKL
Subjt:  IGLKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTPLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKL

Query:  SYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVATGNSLALNPGIQE
        SYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVATGNSLALNPGIQE
Subjt:  SYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVATGNSLALNPGIQE

Query:  EQIVPARYHQ
        EQIVPARY Q
Subjt:  EQIVPARYHQ

YP_009753697.1 RNA polymerase subunit beta [Trichosanthes nervifolia]7.6e-23398.78Show/hide
Query:  MQEQTIFIGNIPLMNSLETSIVNGLYRIVISQILQRPDIYYQSELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLRE
        MQEQTIFIGNIPLMNSL TSIVNGLYRIVISQILQ P IYY+SELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLRE
Subjt:  MQEQTIFIGNIPLMNSLETSIVNGLYRIVISQILQRPDIYYQSELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLRE

Query:  ILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHL
        ILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHL
Subjt:  ILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHL

Query:  IGLKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTPLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKL
        IGLKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTPLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKL
Subjt:  IGLKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTPLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKL

Query:  SYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVATGNSLALNPGIQE
        SYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVATGNSLALNPGIQE
Subjt:  SYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVATGNSLALNPGIQE

Query:  EQIVPARYHQ
        EQIVPARY Q
Subjt:  EQIVPARYHQ

TrEMBL top hitse value%identityAlignment
A0A2Z2CGF9 DNA-directed RNA polymerase subunit beta3.7e-23398.78Show/hide
Query:  MQEQTIFIGNIPLMNSLETSIVNGLYRIVISQILQRPDIYYQSELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLRE
        MQEQTIFIGNIPLMNSL TSIVNGLYRIVISQILQ P IYY+SELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLRE
Subjt:  MQEQTIFIGNIPLMNSLETSIVNGLYRIVISQILQRPDIYYQSELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLRE

Query:  ILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHL
        ILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHL
Subjt:  ILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHL

Query:  IGLKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTPLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKL
        IGLKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTPLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKL
Subjt:  IGLKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTPLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKL

Query:  SYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVATGNSLALNPGIQE
        SYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVATGNSLALNPGIQE
Subjt:  SYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVATGNSLALNPGIQE

Query:  EQIVPARYHQ
        EQIVPARY Q
Subjt:  EQIVPARYHQ

A0A6H0ENW9 DNA-directed RNA polymerase subunit beta3.7e-23398.78Show/hide
Query:  MQEQTIFIGNIPLMNSLETSIVNGLYRIVISQILQRPDIYYQSELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLRE
        MQEQTIFIGNIPLMNSL TSIVNGLYRIVISQILQ P IYY+SELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLRE
Subjt:  MQEQTIFIGNIPLMNSLETSIVNGLYRIVISQILQRPDIYYQSELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLRE

Query:  ILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHL
        ILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHL
Subjt:  ILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHL

Query:  IGLKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTPLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKL
        IGLKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTPLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKL
Subjt:  IGLKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTPLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKL

Query:  SYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVATGNSLALNPGIQE
        SYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVATGNSLALNPGIQE
Subjt:  SYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVATGNSLALNPGIQE

Query:  EQIVPARYHQ
        EQIVPARY Q
Subjt:  EQIVPARYHQ

X2EZ14 DNA-directed RNA polymerase subunit beta3.7e-23398.78Show/hide
Query:  MQEQTIFIGNIPLMNSLETSIVNGLYRIVISQILQRPDIYYQSELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLRE
        MQEQTIFIGNIPLMNSL TSIVNGLYRIVISQILQ P IYY+SELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLRE
Subjt:  MQEQTIFIGNIPLMNSLETSIVNGLYRIVISQILQRPDIYYQSELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLRE

Query:  ILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHL
        ILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHL
Subjt:  ILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHL

Query:  IGLKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTPLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKL
        IGLKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTPLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKL
Subjt:  IGLKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTPLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKL

Query:  SYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVATGNSLALNPGIQE
        SYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVATGNSLALNPGIQE
Subjt:  SYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVATGNSLALNPGIQE

Query:  EQIVPARYHQ
        EQIVPARY Q
Subjt:  EQIVPARYHQ

X2F5U4 DNA-directed RNA polymerase subunit beta3.7e-23398.78Show/hide
Query:  MQEQTIFIGNIPLMNSLETSIVNGLYRIVISQILQRPDIYYQSELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLRE
        MQEQTIFIGNIPLMNSL TSIVNGLYRIVISQILQ P IYY+SELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLRE
Subjt:  MQEQTIFIGNIPLMNSLETSIVNGLYRIVISQILQRPDIYYQSELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLRE

Query:  ILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHL
        ILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHL
Subjt:  ILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHL

Query:  IGLKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTPLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKL
        IGLKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTPLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKL
Subjt:  IGLKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTPLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKL

Query:  SYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVATGNSLALNPGIQE
        SYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVATGNSLALNPGIQE
Subjt:  SYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVATGNSLALNPGIQE

Query:  EQIVPARYHQ
        EQIVPARY Q
Subjt:  EQIVPARYHQ

X2F6I7 DNA-directed RNA polymerase subunit beta3.7e-23398.78Show/hide
Query:  MQEQTIFIGNIPLMNSLETSIVNGLYRIVISQILQRPDIYYQSELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLRE
        MQEQTIFIGNIPLMNSL TSIVNGLYRIVISQILQ P IYY+SELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLRE
Subjt:  MQEQTIFIGNIPLMNSLETSIVNGLYRIVISQILQRPDIYYQSELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLRE

Query:  ILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHL
        ILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHL
Subjt:  ILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHL

Query:  IGLKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTPLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKL
        IGLKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTPLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKL
Subjt:  IGLKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTPLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKL

Query:  SYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVATGNSLALNPGIQE
        SYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVATGNSLALNPGIQE
Subjt:  SYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVATGNSLALNPGIQE

Query:  EQIVPARYHQ
        EQIVPARY Q
Subjt:  EQIVPARYHQ

SwissProt top hitse value%identityAlignment
A0ZZ27 DNA-directed RNA polymerase subunit beta4.2e-22693.9Show/hide
Query:  MQEQTIFIGNIPLMNSLETSIVNGLYRIVISQILQRPDIYYQSELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLRE
        MQEQTIFIGNIPLMNSL TSIVNG+YRIVI+QILQ P IYY+SELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLRE
Subjt:  MQEQTIFIGNIPLMNSLETSIVNGLYRIVISQILQRPDIYYQSELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLRE

Query:  ILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHL
        ILENVCYPEIFLSFL DKEKKKIGSKENAILEFYQQFSCVGGDPVFSESLCKELQKKFFQQRCELGRIGRRN+NQRLNL+IP+NNTFLLPRDILAAAD L
Subjt:  ILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHL

Query:  IGLKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTPLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKL
        IG+KFGMG LDDMNHLKNKRIRSVADLLQDQFGLALVRLEN+VRGTICGAIRHKLIPTPQNLVTSTPLTTT+ESFFGLHPLSQVLDRTNPLTQIVHGRKL
Subjt:  IGLKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTPLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKL

Query:  SYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVATGNSLALNPGIQE
        SYLGPGGLTGRTA+FRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLE+PFY+I ERSKK +MLYLSPSRDEYYMVA GNSLALN GIQE
Subjt:  SYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVATGNSLALNPGIQE

Query:  EQIVPARYHQ
        EQ+VPARY Q
Subjt:  EQIVPARYHQ

A6MM28 DNA-directed RNA polymerase subunit beta1.2e-22593.66Show/hide
Query:  MQEQTIFIGNIPLMNSLETSIVNGLYRIVISQILQRPDIYYQSELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLRE
        MQEQTIFIGNIPLMNSL TSIVNG+YRIVI+QILQ P IYY+SELDHNG SVYTGTIISDWGGR ELEIDRKARIWARVSRKQKISILVLSSAMGSNLRE
Subjt:  MQEQTIFIGNIPLMNSLETSIVNGLYRIVISQILQRPDIYYQSELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLRE

Query:  ILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHL
        IL+NVCYPEIFLSF NDKEKKKIGSKENAILEFYQQF+CVGGDPVFSESLCKELQKKFFQQRCELGRIGRRN+N+RLNLDIP+NNTFLLPRDILAAAD L
Subjt:  ILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHL

Query:  IGLKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTPLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKL
        IG+KFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLEN VRGTICGAIRHKLIPTPQNLVTSTPLTTT+ESFFGLHPLSQVLDRTNPLTQIVHGRK 
Subjt:  IGLKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTPLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKL

Query:  SYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVATGNSLALNPGIQE
        SYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLE+PFYEISERSKKVRMLYLSPS+DEYYMVA GNSL+LN GIQE
Subjt:  SYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVATGNSLALNPGIQE

Query:  EQIVPARYHQ
        EQ+VPARY Q
Subjt:  EQIVPARYHQ

Q0ZJ28 DNA-directed RNA polymerase subunit beta7.6e-22894.15Show/hide
Query:  MQEQTIFIGNIPLMNSLETSIVNGLYRIVISQILQRPDIYYQSELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLRE
        MQEQTIFIGNIPLMNSL TSIVNGLYRIVI+QILQ P IYY+SELDHNGISVYTGTI+SDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLRE
Subjt:  MQEQTIFIGNIPLMNSLETSIVNGLYRIVISQILQRPDIYYQSELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLRE

Query:  ILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHL
        ILENVCYPEIFLSFLNDKEKKKIGSKE+AILEFYQQF+CVGGDPVFSESLCKELQKKFFQQRCELGRIGRRN+N+RLNLDIP+NNTFLLP+DILAAADHL
Subjt:  ILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHL

Query:  IGLKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTPLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKL
        IG+KFGMG LDDMNHLKNKRIRSVADLLQDQFGLAL+RLEN+VRGTICGAIRHKLIPTPQNLVTSTP+TTT+ESFFGLHPLSQVLDRTNPLTQIVHGRK 
Subjt:  IGLKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTPLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKL

Query:  SYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVATGNSLALNPGIQE
        SYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLE+PFYEISERSKKVRMLYLSPSRDEYYMVA GNSLALN GIQE
Subjt:  SYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVATGNSLALNPGIQE

Query:  EQIVPARYHQ
        EQ+VPARY Q
Subjt:  EQIVPARYHQ

Q2L8Z9 DNA-directed RNA polymerase subunit beta4.2e-22693.9Show/hide
Query:  MQEQTIFIGNIPLMNSLETSIVNGLYRIVISQILQRPDIYYQSELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLRE
        MQEQTIFIGNIPLMNSL TSIVNG+YRIVI+QILQ P IYY+SELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLRE
Subjt:  MQEQTIFIGNIPLMNSLETSIVNGLYRIVISQILQRPDIYYQSELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLRE

Query:  ILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHL
        ILENVCYPEIFLSFL DKEKKKIGSKENAILEFYQQFSCVGGDPVFSESLCKELQKKFFQQRCELGRIGRRN+NQRLNL+IP+NNTFLLPRDILAAAD L
Subjt:  ILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHL

Query:  IGLKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTPLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKL
        IG+KFGMG LDDMNHLKNKRIRSVADLLQDQFGLALVRLEN+VRGTICGAIRHKLIPTPQNLVTSTPLTTT+ESFFGLHPLSQVLDRTNPLTQIVHGRKL
Subjt:  IGLKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTPLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKL

Query:  SYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVATGNSLALNPGIQE
        SYLGPGGLTGRTA+FRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLE+PFY+I ERSKK +MLYLSPSRDEYYMVA GNSLALN GIQE
Subjt:  SYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVATGNSLALNPGIQE

Query:  EQIVPARYHQ
        EQ+VPARY Q
Subjt:  EQIVPARYHQ

Q4VZP1 DNA-directed RNA polymerase subunit beta8.4e-23598.54Show/hide
Query:  MQEQTIFIGNIPLMNSLETSIVNGLYRIVISQILQRPDIYYQSELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLRE
        MQEQTIFIGNIPLMNSL TSIVNGLYRIVISQILQ P IYY+SELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLRE
Subjt:  MQEQTIFIGNIPLMNSLETSIVNGLYRIVISQILQRPDIYYQSELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLRE

Query:  ILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHL
        ILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLL RDILAAADHL
Subjt:  ILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHL

Query:  IGLKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTPLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKL
        IGLKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTPLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKL
Subjt:  IGLKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTPLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKL

Query:  SYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVATGNSLALNPGIQE
        SYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVATGNSLALNPGIQE
Subjt:  SYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVATGNSLALNPGIQE

Query:  EQIVPARYHQ
        EQIVPARY Q
Subjt:  EQIVPARYHQ

Arabidopsis top hitse value%identityAlignment
AT3G18090.1 nuclear RNA polymerase D2B2.2e-0423.53Show/hide
Query:  LIGLKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALV----RLENMVRGTICG-----AIRHKLIPTPQNLVTSTPLTTTFESFFGLHPLSQV------
        L+    G    ++ +  +NKRI    +LL+ +  + L     ++   ++  + G      I H L  +    V +  L   F +    HP  ++      
Subjt:  LIGLKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALV----RLENMVRGTICG-----AIRHKLIPTPQNLVTSTPLTTTFESFFGLHPLSQV------

Query:  ---LDRTNPLTQIVHGRK----LSYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAI
           L R NPL  ++  R+    + Y G  G          R  HPSH+GR+C + T +G N GL+ ++++
Subjt:  ---LDRTNPLTQIVHGRK----LSYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAI

AT3G23780.1 nuclear RNA polymerase D2A4.9e-0423.78Show/hide
Query:  GMGTLDDMNHLKNKRIRSVADLLQDQFGLALV----RLENMVRGTICG-----AIRHKLIPTPQNLVTSTPLTTTFESFFGLHPLSQV---------LDR
        G    ++ +  +NKRI    +LL+ +  + L     ++   ++  + G      I H L  +    V +  L+  F +    HP  ++         L R
Subjt:  GMGTLDDMNHLKNKRIRSVADLLQDQFGLALV----RLENMVRGTICG-----AIRHKLIPTPQNLVTSTPLTTTFESFFGLHPLSQV---------LDR

Query:  TNPLTQIVHGRK----LSYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAI
         NPL  ++  R+    + Y G  G          R  HPSH+GR+C + T +G N GL+ ++++
Subjt:  TNPLTQIVHGRK----LSYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAI

AT3G23780.2 nuclear RNA polymerase D2A4.9e-0423.78Show/hide
Query:  GMGTLDDMNHLKNKRIRSVADLLQDQFGLALV----RLENMVRGTICG-----AIRHKLIPTPQNLVTSTPLTTTFESFFGLHPLSQV---------LDR
        G    ++ +  +NKRI    +LL+ +  + L     ++   ++  + G      I H L  +    V +  L+  F +    HP  ++         L R
Subjt:  GMGTLDDMNHLKNKRIRSVADLLQDQFGLALV----RLENMVRGTICG-----AIRHKLIPTPQNLVTSTPLTTTFESFFGLHPLSQV---------LDR

Query:  TNPLTQIVHGRK----LSYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAI
         NPL  ++  R+    + Y G  G          R  HPSH+GR+C + T +G N GL+ ++++
Subjt:  TNPLTQIVHGRK----LSYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAI

AT4G21710.1 DNA-directed RNA polymerase family protein8.1e-0728.18Show/hide
Query:  DDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRG------------TICGAIRHKLIPTPQNLVTSTPLTTTFESFFGLHPLSQVLDRTNPLTQIVHGR
        DD +H  NKR+     LL   F +   +L   VR              +  AI+ K I +      +T       +      +SQVL+R    + + H R
Subjt:  DDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRG------------TICGAIRHKLIPTPQNLVTSTPLTTTFESFFGLHPLSQVLDRTNPLTQIVHGR

Query:  KLSYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPS
        +L+   P G  G+ A  + R +H S +G +CP +T EG   GL+ +LA+   I   GS   P  E  E         +SPS
Subjt:  KLSYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPS

ATCG00190.1 RNA polymerase subunit beta8.7e-21990.05Show/hide
Query:  MQEQTIFIGNIPLMNSLETSIVNGLYRIVISQILQRPDIYYQSELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLRE
        MQEQ IFIGNIPLMNSL TSIVNG+YRIVI+QILQ P IYYQSELDHNGISVYTGTIISDWGGRLELEID+KARIWARVSRKQKISILVLSSAMG NLRE
Subjt:  MQEQTIFIGNIPLMNSLETSIVNGLYRIVISQILQRPDIYYQSELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLRE

Query:  ILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHL
        ILENVCYPEIFLSFL DKEKKKIGSKENAILEFYQQFSCVGGDP+FSESLCKELQKKFF QRCELGRIGRRN+N RLNL+IP+NN FLLPRD+LAAADHL
Subjt:  ILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHL

Query:  IGLKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTPLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKL
        IG+KFGMGTLDDMNHLKNKRIRSVADLLQDQ GLAL RLEN+V+GTI GAIRHKLIPTPQNLVTSTPLTTT+ESFFGLHPLSQVLDRTNPLTQIVHGRKL
Subjt:  IGLKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTPLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKL

Query:  SYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKK--VRMLYLSPSRDEYYMVATGNSLALNPGI
        SYLGPGGLTGRTA+FRIRDIHPSHYGRICPIDTSEGINVGLIGSL+IHARIG WGSLE+PFYE+ E+SKK  +RML+LSPS+DEYYM+A GNSLALN GI
Subjt:  SYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKK--VRMLYLSPSRDEYYMVATGNSLALNPGI

Query:  QEEQIVPARYHQ
        QEEQ VPARY Q
Subjt:  QEEQIVPARYHQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGAACAAACAATTTTTATTGGAAACATTCCTCTAATGAATTCCCTAGAAACTTCTATAGTAAATGGACTCTACAGAATTGTGATCAGTCAAATATTGCAAAGACC
CGATATCTATTACCAGTCAGAATTGGACCATAACGGAATTTCGGTCTATACCGGCACCATAATATCTGATTGGGGAGGAAGATTAGAATTAGAGATTGATCGAAAAGCAA
GGATATGGGCTCGTGTGAGTAGGAAACAGAAAATATCTATTCTAGTTCTATCATCAGCTATGGGTTCGAATCTAAGAGAAATTCTCGAGAATGTTTGCTACCCTGAAATT
TTTTTGTCTTTCCTGAATGATAAGGAGAAAAAAAAAATTGGATCAAAAGAAAATGCCATTTTGGAGTTTTATCAACAATTTTCTTGTGTAGGTGGAGATCCGGTATTTTC
TGAATCCTTATGTAAGGAATTACAAAAGAAATTCTTTCAACAAAGATGTGAATTAGGAAGGATTGGTCGACGAAATCTGAACCAGAGACTTAATCTTGATATACCTGAGA
ACAATACATTTTTGTTACCGCGAGATATATTGGCAGCTGCAGATCATTTGATTGGACTGAAATTTGGAATGGGTACACTTGACGATATGAATCATTTGAAAAATAAACGG
ATTCGTTCTGTCGCCGATCTCTTACAAGATCAATTCGGATTGGCTCTAGTTCGTTTAGAAAATATGGTTAGAGGAACTATATGTGGAGCAATTAGACATAAATTGATACC
GACTCCTCAGAATTTGGTAACTTCAACTCCATTAACAACCACGTTTGAATCTTTTTTCGGATTACACCCATTATCTCAAGTTTTAGATCGAACTAATCCATTGACACAAA
TAGTTCATGGGAGAAAATTGAGTTATTTGGGCCCAGGAGGATTGACAGGGCGAACTGCTAGTTTTCGGATACGAGATATACATCCTAGTCATTATGGACGCATTTGCCCA
ATTGACACGTCTGAAGGAATTAATGTTGGACTTATTGGATCATTAGCAATTCATGCAAGGATTGGTCATTGGGGATCTCTAGAAACTCCATTTTATGAAATTTCTGAGAG
ATCAAAAAAAGTGCGGATGCTTTATTTATCACCAAGTCGAGATGAATACTATATGGTAGCGACAGGAAATTCTTTGGCACTGAATCCAGGTATTCAGGAAGAACAGATTG
TTCCAGCTCGATACCATCAAATCCCGAATCTATTTATAGTACCCAATCGGATTGGAATATCATAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGAACAAACAATTTTTATTGGAAACATTCCTCTAATGAATTCCCTAGAAACTTCTATAGTAAATGGACTCTACAGAATTGTGATCAGTCAAATATTGCAAAGACC
CGATATCTATTACCAGTCAGAATTGGACCATAACGGAATTTCGGTCTATACCGGCACCATAATATCTGATTGGGGAGGAAGATTAGAATTAGAGATTGATCGAAAAGCAA
GGATATGGGCTCGTGTGAGTAGGAAACAGAAAATATCTATTCTAGTTCTATCATCAGCTATGGGTTCGAATCTAAGAGAAATTCTCGAGAATGTTTGCTACCCTGAAATT
TTTTTGTCTTTCCTGAATGATAAGGAGAAAAAAAAAATTGGATCAAAAGAAAATGCCATTTTGGAGTTTTATCAACAATTTTCTTGTGTAGGTGGAGATCCGGTATTTTC
TGAATCCTTATGTAAGGAATTACAAAAGAAATTCTTTCAACAAAGATGTGAATTAGGAAGGATTGGTCGACGAAATCTGAACCAGAGACTTAATCTTGATATACCTGAGA
ACAATACATTTTTGTTACCGCGAGATATATTGGCAGCTGCAGATCATTTGATTGGACTGAAATTTGGAATGGGTACACTTGACGATATGAATCATTTGAAAAATAAACGG
ATTCGTTCTGTCGCCGATCTCTTACAAGATCAATTCGGATTGGCTCTAGTTCGTTTAGAAAATATGGTTAGAGGAACTATATGTGGAGCAATTAGACATAAATTGATACC
GACTCCTCAGAATTTGGTAACTTCAACTCCATTAACAACCACGTTTGAATCTTTTTTCGGATTACACCCATTATCTCAAGTTTTAGATCGAACTAATCCATTGACACAAA
TAGTTCATGGGAGAAAATTGAGTTATTTGGGCCCAGGAGGATTGACAGGGCGAACTGCTAGTTTTCGGATACGAGATATACATCCTAGTCATTATGGACGCATTTGCCCA
ATTGACACGTCTGAAGGAATTAATGTTGGACTTATTGGATCATTAGCAATTCATGCAAGGATTGGTCATTGGGGATCTCTAGAAACTCCATTTTATGAAATTTCTGAGAG
ATCAAAAAAAGTGCGGATGCTTTATTTATCACCAAGTCGAGATGAATACTATATGGTAGCGACAGGAAATTCTTTGGCACTGAATCCAGGTATTCAGGAAGAACAGATTG
TTCCAGCTCGATACCATCAAATCCCGAATCTATTTATAGTACCCAATCGGATTGGAATATCATAA
Protein sequenceShow/hide protein sequence
MQEQTIFIGNIPLMNSLETSIVNGLYRIVISQILQRPDIYYQSELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLREILENVCYPEI
FLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHLIGLKFGMGTLDDMNHLKNKR
IRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTPLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGRICP
IDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVATGNSLALNPGIQEEQIVPARYHQIPNLFIVPNRIGIS