| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6605170.1 RNA polymerase sigma factor sigA, partial [Cucurbita argyrosperma subsp. sororia] | 1.2e-229 | 79.42 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVDTPSSPTAEPWLNNTTIWEDEE
MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVDTPSSPTAEPWL+NTTIWEDEE
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVDTPSSPTAEPWLNNTTIWEDEE
Query: TDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDVPRGKTEKKVPVTCSGVSARQRRMNSKRKIQSKHVFMAQPKISKQQKPSISPELLQNRLRGYVKGLV
TDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PRGKTEKKVPVTCSGVSARQRRM+SKRKIQSKHVFMAQPKISKQ KPSISPELLQNRLRGYVKGLV
Subjt: TDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDVPRGKTEKKVPVTCSGVSARQRRMNSKRKIQSKHVFMAQPKISKQQKPSISPELLQNRLRGYVKGLV
Query: SEEILPHSEVVRLSKKIKVGLALEEHKTRLPHAL---------------------------------LVQIHIDYCLPLS-------------FHGGLIG
SEEILPHSEVVRLSKKIKVGLALEEHKTRL L L ++ + ++ GGLIG
Subjt: SEEILPHSEVVRLSKKIKVGLALEEHKTRLPHAL---------------------------------LVQIHIDYCLPLS-------------FHGGLIG
Query: LLRGIEKFDSSKGFKISTYVYWWIRQPKHKPIEKKTGYLSSKYLMQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKK
LLRGIEKFDSSKGFKISTYVYWWIR QGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKK
Subjt: LLRGIEKFDSSKGFKISTYVYWWIRQPKHKPIEKKTGYLSSKYLMQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKK
Query: KVKNATEVLQISNSAISQYLFFIFLIKLTSHCFQAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREII
KVKNATE AISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREII
Subjt: KVKNATEVLQISNSAISQYLFFIFLIKLTSHCFQAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREII
Query: RLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRKMEAMLLKH
RLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRKMEAMLLKH
Subjt: RLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRKMEAMLLKH
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| XP_022947612.1 RNA polymerase sigma factor sigA-like [Cucurbita moschata] | 4.5e-232 | 80.14 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVDTPSSPTAEPWLNNTTIWEDEE
MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVDTPSSPTAEPWLNNTTIWEDEE
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVDTPSSPTAEPWLNNTTIWEDEE
Query: TDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDVPRGKTEKKVPVTCSGVSARQRRMNSKRKIQSKHVFMAQPKISKQQKPSISPELLQNRLRGYVKGLV
TDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDVPRGKTEKKVPVTCSGVSARQRRMNSKRKIQSKHVFMAQPKISKQQKPSISPELLQNRLRGYVKGLV
Subjt: TDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDVPRGKTEKKVPVTCSGVSARQRRMNSKRKIQSKHVFMAQPKISKQQKPSISPELLQNRLRGYVKGLV
Query: SEEILPHSEVVRLSKKIKVGLALEEHKTRLPHAL---------------------------------LVQIHIDYCLPLS-------------FHGGLIG
SEEILPHSEVVRLSKKIKVGLALEEHKTRL L L ++ + ++ GGLIG
Subjt: SEEILPHSEVVRLSKKIKVGLALEEHKTRLPHAL---------------------------------LVQIHIDYCLPLS-------------FHGGLIG
Query: LLRGIEKFDSSKGFKISTYVYWWIRQPKHKPIEKKTGYLSSKYLMQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKK
LLRGIEKFDSSKGFKISTYVYWWIR QGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKK
Subjt: LLRGIEKFDSSKGFKISTYVYWWIRQPKHKPIEKKTGYLSSKYLMQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKK
Query: KVKNATEVLQISNSAISQYLFFIFLIKLTSHCFQAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREII
KVKNATE AISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREII
Subjt: KVKNATEVLQISNSAISQYLFFIFLIKLTSHCFQAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREII
Query: RLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRKMEAMLLKH
RLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRKMEAMLLKH
Subjt: RLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRKMEAMLLKH
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| XP_023006851.1 RNA polymerase sigma factor sigA-like [Cucurbita maxima] | 3.3e-227 | 78.7 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVDTPSSPTAEPWLNNTTIWEDEE
MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTK VVIAKHSADFSPSY PSNRHVQCIKAVKEHVDTPSSPTAEPWL+NTTIWEDEE
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVDTPSSPTAEPWLNNTTIWEDEE
Query: TDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDVPRGKTEKKVPVTCSGVSARQRRMNSKRKIQSKHVFMAQPKISKQQKPSISPELLQNRLRGYVKGLV
TDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PRGKTEKKVPVTCSGVSARQRRM+SKRKIQSKHVFMAQPKISKQ KP+ISPELLQNRLRGYVKGLV
Subjt: TDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDVPRGKTEKKVPVTCSGVSARQRRMNSKRKIQSKHVFMAQPKISKQQKPSISPELLQNRLRGYVKGLV
Query: SEEILPHSEVVRLSKKIKVGLALEEHKTRLPHAL---------------------------------LVQIHIDYCLPLS-------------FHGGLIG
SEEILPHSEVVRLSKKIKVGLALEEHKTRL L L ++ + ++ GGLIG
Subjt: SEEILPHSEVVRLSKKIKVGLALEEHKTRLPHAL---------------------------------LVQIHIDYCLPLS-------------FHGGLIG
Query: LLRGIEKFDSSKGFKISTYVYWWIRQPKHKPIEKKTGYLSSKYLMQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKK
LLRGIEKFDSSKGFKISTYVYWWIR QGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKK
Subjt: LLRGIEKFDSSKGFKISTYVYWWIRQPKHKPIEKKTGYLSSKYLMQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKK
Query: KVKNATEVLQISNSAISQYLFFIFLIKLTSHCFQAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREII
KVKNATE AISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTW LKIEVNKLINMTLEDREREII
Subjt: KVKNATEVLQISNSAISQYLFFIFLIKLTSHCFQAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREII
Query: RLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRKMEAMLLKH
RLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRKMEAMLLKH
Subjt: RLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRKMEAMLLKH
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| XP_023533104.1 RNA polymerase sigma factor sigA-like [Cucurbita pepo subsp. pepo] | 6.1e-229 | 79.24 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVDTPSSPTAEPWLNNTTIWEDEE
MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVDTPSSPTAEPWL+NTTIWEDEE
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVDTPSSPTAEPWLNNTTIWEDEE
Query: TDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDVPRGKTEKKVPVTCSGVSARQRRMNSKRKIQSKHVFMAQPKISKQQKPSISPELLQNRLRGYVKGLV
TDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDVPRGKTEKKVPVTCSGVSARQRRM+SKRKIQSKHVF+AQPKISKQ KPSISPELLQNRLRGYVKGLV
Subjt: TDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDVPRGKTEKKVPVTCSGVSARQRRMNSKRKIQSKHVFMAQPKISKQQKPSISPELLQNRLRGYVKGLV
Query: SEEILPHSEVVRLSKKIKVGLALEEHKTRLPHAL---------------------------------LVQIHIDYCLPLS-------------FHGGLIG
SEEILPHSEVVRLSKKIKVGLALEEHKTRL L L ++ + ++ GGLIG
Subjt: SEEILPHSEVVRLSKKIKVGLALEEHKTRLPHAL---------------------------------LVQIHIDYCLPLS-------------FHGGLIG
Query: LLRGIEKFDSSKGFKISTYVYWWIRQPKHKPIEKKTGYLSSKYLMQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKK
LLRGIEKFDSSKGFKISTYVYWWIR QGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKK
Subjt: LLRGIEKFDSSKGFKISTYVYWWIRQPKHKPIEKKTGYLSSKYLMQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKK
Query: KVKNATEVLQISNSAISQYLFFIFLIKLTSHCFQAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREII
KVKNATE AISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTW LKIEVNKLINMTLEDREREII
Subjt: KVKNATEVLQISNSAISQYLFFIFLIKLTSHCFQAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREII
Query: RLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRKMEAMLLKH
RLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRKMEAMLLKH
Subjt: RLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRKMEAMLLKH
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| XP_038902049.1 RNA polymerase sigma factor sigA [Benincasa hispida] | 2.5e-214 | 74.95 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYL-NDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVDTPSSPTAEPWLNNTTIWEDE
MATAAIIGLGAAKRLLNSSSYYSDFTEK+LY+ NDHRLGQ QVS TKSVVIAK SA+FSPSYP SNRH QCIKAVKEHVDTPSSPTAEPWL+NTTIWEDE
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYL-NDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVDTPSSPTAEPWLNNTTIWEDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDVPRGKTEKKVPVTCSGVSARQRRMNSKRKIQSKHVFMAQPKISKQQKPSISPELLQNRLRGYVKGL
E DLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PRGKTEKKVPVTCSGVSARQRRM+SKRKIQSKHVFMAQPKISKQ +P+ISPELLQNRL+GYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDVPRGKTEKKVPVTCSGVSARQRRMNSKRKIQSKHVFMAQPKISKQQKPSISPELLQNRLRGYVKGL
Query: VSEEILPHSEVVRLSKKIKVGLALEEHKTRLPHAL---------------------------------LVQIHIDYCLPLS-------------FHGGLI
+SEE+L H+EVVRLSKKIKVGLALEE KTRL L L ++ + ++ GGLI
Subjt: VSEEILPHSEVVRLSKKIKVGLALEEHKTRLPHAL---------------------------------LVQIHIDYCLPLS-------------FHGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQPKHKPIEKKTGYLSSKYLMQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSK
GLLRGIEKFDSSKGFKISTYVYWWIR QGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPS+DRIAESLNMSK
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQPKHKPIEKKTGYLSSKYLMQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSK
Query: KKVKNATEVLQISNSAISQYLFFIFLIKLTSHCFQAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREI
KKVKNATE AISKVFSLDREAFPSLNGLPGETHHSYIADN LENNPWHGTDTW LK EVNKLINMTL DREREI
Subjt: KKVKNATEVLQISNSAISQYLFFIFLIKLTSHCFQAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREI
Query: IRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRKMEAMLLKH
IRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK RKMEAMLLKH
Subjt: IRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRKMEAMLLKH
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S4E4N5 RNA polymerase sigma factor sigA | 3.3e-212 | 74.41 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRH-VQCIKAVKEHVDTPSSPTAEPWLNNTTIWEDE
MAT AIIGLGAAKRLLNSSSYYSDFTEK+LY ND+RLGQ QVS TKSVVIAK SA+FSPSYP SNRH QCIKAVKEHV+TPSSPTAEPWL NTTIWEDE
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRH-VQCIKAVKEHVDTPSSPTAEPWLNNTTIWEDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDVPRGKTEKKVPVTCSGVSARQRRMNSKRKIQSKHVFMAQPKISKQQKPSISPELLQNRLRGYVKGL
ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD+PR KT KKVPVTCSGVSARQRRM+SKRKIQSKHVFMAQPKISKQ +P+ISPELLQNRL+GYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDVPRGKTEKKVPVTCSGVSARQRRMNSKRKIQSKHVFMAQPKISKQQKPSISPELLQNRLRGYVKGL
Query: VSEEILPHSEVVRLSKKIKVGLALEEHKTRLPHAL---------------------------------LVQIHIDYCLPLS-------------FHGGLI
+SEE+L H+EVVRLSKKIKVGLALEEHKTRL L L ++ + ++ GGLI
Subjt: VSEEILPHSEVVRLSKKIKVGLALEEHKTRLPHAL---------------------------------LVQIHIDYCLPLS-------------FHGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQPKHKPIEKKTGYLSSKYLMQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSK
GLLRGIEKFDSSKGFKISTYVYWWIR QGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPS+DRIAESLNMSK
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQPKHKPIEKKTGYLSSKYLMQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSK
Query: KKVKNATEVLQISNSAISQYLFFIFLIKLTSHCFQAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREI
KKVKNATE AISKVFSLDREAFPSLNGLPGETHHSYIADN LENNPWHGTDTW LK EVNKLINMTL DREREI
Subjt: KKVKNATEVLQISNSAISQYLFFIFLIKLTSHCFQAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREI
Query: IRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRKMEAMLLKH
IRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK RKMEAML+KH
Subjt: IRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRKMEAMLLKH
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| A0A5D3BME8 RNA polymerase sigma factor sigA | 3.3e-212 | 74.41 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRH-VQCIKAVKEHVDTPSSPTAEPWLNNTTIWEDE
MAT AIIGLGAAKRLLNSSSYYSDFTEK+LY ND+RLGQ QVS TKSVVIAK SA+FSPSYP SNRH QCIKAVKEHV+TPSSPTAEPWL NTTIWEDE
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRH-VQCIKAVKEHVDTPSSPTAEPWLNNTTIWEDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDVPRGKTEKKVPVTCSGVSARQRRMNSKRKIQSKHVFMAQPKISKQQKPSISPELLQNRLRGYVKGL
ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD+PR KT KKVPVTCSGVSARQRRM+SKRKIQSKHVFMAQPKISKQ +P+ISPELLQNRL+GYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDVPRGKTEKKVPVTCSGVSARQRRMNSKRKIQSKHVFMAQPKISKQQKPSISPELLQNRLRGYVKGL
Query: VSEEILPHSEVVRLSKKIKVGLALEEHKTRLPHAL---------------------------------LVQIHIDYCLPLS-------------FHGGLI
+SEE+L H+EVVRLSKKIKVGLALEEHKTRL L L ++ + ++ GGLI
Subjt: VSEEILPHSEVVRLSKKIKVGLALEEHKTRLPHAL---------------------------------LVQIHIDYCLPLS-------------FHGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQPKHKPIEKKTGYLSSKYLMQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSK
GLLRGIEKFDSSKGFKISTYVYWWIR QGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPS+DRIAESLNMSK
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQPKHKPIEKKTGYLSSKYLMQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSK
Query: KKVKNATEVLQISNSAISQYLFFIFLIKLTSHCFQAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREI
KKVKNATE AISKVFSLDREAFPSLNGLPGETHHSYIADN LENNPWHGTDTW LK EVNKLINMTL DREREI
Subjt: KKVKNATEVLQISNSAISQYLFFIFLIKLTSHCFQAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREI
Query: IRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRKMEAMLLKH
IRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK RKMEAML+KH
Subjt: IRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRKMEAMLLKH
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| A0A6J1D604 RNA polymerase sigma factor sigA | 7.1e-207 | 72.38 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVDTPSSPTAEPWLNNTTIWEDEE
MATAAIIGLGAAKRLLNSSSYYSDF EK+LY NDHRLGQ+QVS TKSVVIAK SA+FSPS+P SNRH QCIKAVKEHVDTPSSPT EPWL N+T WEDEE
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVDTPSSPTAEPWLNNTTIWEDEE
Query: TDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDVPRGKTEKKVPVTCSGVSARQRRMNSKRKIQSKHVFMAQPKISKQQKPSISPELLQNRLRGYVKGLV
DLKCTVEALLLLQKSMLEKQWNLSFEQTV TD RG+T+KKVPVTCSGVSARQRRM+SKRKIQSK+ FM QPKISKQ + +ISPELLQ RL+GYVKGLV
Subjt: TDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDVPRGKTEKKVPVTCSGVSARQRRMNSKRKIQSKHVFMAQPKISKQQKPSISPELLQNRLRGYVKGLV
Query: SEEILPHSEVVRLSKKIKVGLALEEHKTRLPHAL---------------------------------LVQIHIDYCLPLS-------------FHGGLIG
SEE+L H+EVVRLSKKIKVGLALEE KTRL L L ++ + ++ GGLIG
Subjt: SEEILPHSEVVRLSKKIKVGLALEEHKTRLPHAL---------------------------------LVQIHIDYCLPLS-------------FHGGLIG
Query: LLRGIEKFDSSKGFKISTYVYWWIRQPKHKPIEKKTGYLSSKYLMQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKK
LLRGIEKFDSSKGF+ISTYVYWWIR QGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPS+DRIAESLNMSKK
Subjt: LLRGIEKFDSSKGFKISTYVYWWIRQPKHKPIEKKTGYLSSKYLMQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKK
Query: KVKNATEVLQISNSAISQYLFFIFLIKLTSHCFQAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREII
KVKNATE AISKVFSLDREAFPSLNGLPGETHHSYIADN LEN+PWHGTDTW LK EVNKLINMTL DREREII
Subjt: KVKNATEVLQISNSAISQYLFFIFLIKLTSHCFQAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREII
Query: RLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRKMEAMLLKH
RLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK RKMEAMLLKH
Subjt: RLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRKMEAMLLKH
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| A0A6J1G739 RNA polymerase sigma factor sigA-like | 2.2e-232 | 80.14 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVDTPSSPTAEPWLNNTTIWEDEE
MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVDTPSSPTAEPWLNNTTIWEDEE
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVDTPSSPTAEPWLNNTTIWEDEE
Query: TDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDVPRGKTEKKVPVTCSGVSARQRRMNSKRKIQSKHVFMAQPKISKQQKPSISPELLQNRLRGYVKGLV
TDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDVPRGKTEKKVPVTCSGVSARQRRMNSKRKIQSKHVFMAQPKISKQQKPSISPELLQNRLRGYVKGLV
Subjt: TDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDVPRGKTEKKVPVTCSGVSARQRRMNSKRKIQSKHVFMAQPKISKQQKPSISPELLQNRLRGYVKGLV
Query: SEEILPHSEVVRLSKKIKVGLALEEHKTRLPHAL---------------------------------LVQIHIDYCLPLS-------------FHGGLIG
SEEILPHSEVVRLSKKIKVGLALEEHKTRL L L ++ + ++ GGLIG
Subjt: SEEILPHSEVVRLSKKIKVGLALEEHKTRLPHAL---------------------------------LVQIHIDYCLPLS-------------FHGGLIG
Query: LLRGIEKFDSSKGFKISTYVYWWIRQPKHKPIEKKTGYLSSKYLMQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKK
LLRGIEKFDSSKGFKISTYVYWWIR QGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKK
Subjt: LLRGIEKFDSSKGFKISTYVYWWIRQPKHKPIEKKTGYLSSKYLMQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKK
Query: KVKNATEVLQISNSAISQYLFFIFLIKLTSHCFQAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREII
KVKNATE AISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREII
Subjt: KVKNATEVLQISNSAISQYLFFIFLIKLTSHCFQAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREII
Query: RLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRKMEAMLLKH
RLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRKMEAMLLKH
Subjt: RLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRKMEAMLLKH
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| A0A6J1KWY7 RNA polymerase sigma factor sigA-like | 1.6e-227 | 78.7 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVDTPSSPTAEPWLNNTTIWEDEE
MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTK VVIAKHSADFSPSY PSNRHVQCIKAVKEHVDTPSSPTAEPWL+NTTIWEDEE
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVDTPSSPTAEPWLNNTTIWEDEE
Query: TDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDVPRGKTEKKVPVTCSGVSARQRRMNSKRKIQSKHVFMAQPKISKQQKPSISPELLQNRLRGYVKGLV
TDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PRGKTEKKVPVTCSGVSARQRRM+SKRKIQSKHVFMAQPKISKQ KP+ISPELLQNRLRGYVKGLV
Subjt: TDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDVPRGKTEKKVPVTCSGVSARQRRMNSKRKIQSKHVFMAQPKISKQQKPSISPELLQNRLRGYVKGLV
Query: SEEILPHSEVVRLSKKIKVGLALEEHKTRLPHAL---------------------------------LVQIHIDYCLPLS-------------FHGGLIG
SEEILPHSEVVRLSKKIKVGLALEEHKTRL L L ++ + ++ GGLIG
Subjt: SEEILPHSEVVRLSKKIKVGLALEEHKTRLPHAL---------------------------------LVQIHIDYCLPLS-------------FHGGLIG
Query: LLRGIEKFDSSKGFKISTYVYWWIRQPKHKPIEKKTGYLSSKYLMQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKK
LLRGIEKFDSSKGFKISTYVYWWIR QGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKK
Subjt: LLRGIEKFDSSKGFKISTYVYWWIRQPKHKPIEKKTGYLSSKYLMQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKK
Query: KVKNATEVLQISNSAISQYLFFIFLIKLTSHCFQAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREII
KVKNATE AISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTW LKIEVNKLINMTLEDREREII
Subjt: KVKNATEVLQISNSAISQYLFFIFLIKLTSHCFQAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREII
Query: RLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRKMEAMLLKH
RLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRKMEAMLLKH
Subjt: RLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRKMEAMLLKH
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| SwissProt top hits | e value | %identity | Alignment |
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| O24629 RNA polymerase sigma factor sigA | 4.2e-148 | 55.42 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVDTPSSPTAEPWLNNTTIWE---
MATAA+IGL KRLL+SS Y+SD TEK L +NDH Q +++TKS + AK ++++SPS+P SNRH Q KA+KE VD S T +PWL N T E
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVDTPSSPTAEPWLNNTTIWE---
Query: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDVPRGKT--EKKVPV-TCSGVSARQRRMNSKRKIQSKHVFMAQPKISKQQKPSISPELLQNR
D++ + +VEA+LLLQKSMLEK WNLSFE+ VS++ P T +KK+PV TCSG+SARQRR+ +K+K HV ++S +
Subjt: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDVPRGKT--EKKVPV-TCSGVSARQRRMNSKRKIQSKHVFMAQPKISKQQKPSISPELLQNR
Query: LRGYVKGLVSEEILPHSEVVRLSKKIKVGLALEEHKTRLP-----------------------HALLVQIHI--------DYCLPLSF------------
+RGYVKG++SE++L H EVVRLSKKIK GL L++HK+RL A L++ H+ + L +S
Subjt: LRGYVKGLVSEEILPHSEVVRLSKKIKVGLALEEHKTRLP-----------------------HALLVQIHI--------DYCLPLSF------------
Query: ---HGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQPKHKPIEKKTGYLSSKYLMQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRI
GGLIGLLRGIEKFDSSKGF+ISTYVYWWIR QGVSRALV+NSRTLRLPTHLHERLGLIRNAK++LQEKGITPSIDRI
Subjt: ---HGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQPKHKPIEKKTGYLSSKYLMQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRI
Query: AESLNMSKKKVKNATEVLQISNSAISQYLFFIFLIKLTSHCFQAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMT
AESLNMS+KKV+NATE A+SKVFSLDR+AFPSLNGLPGETHHSYIAD RLENNPWHG D +LK EV+KLI+ T
Subjt: AESLNMSKKKVKNATEVLQISNSAISQYLFFIFLIKLTSHCFQAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMT
Query: LEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRKMEAMLLKH
L +RE+EIIRLY+GLD ECLTWE+ISKRIGLSRERVRQVGLVALEKLK AA+ RKMEAM+LK+
Subjt: LEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRKMEAMLLKH
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| O66381 RNA polymerase sigma factor SigA | 1.6e-22 | 28.7 | Show/hide |
Query: LQNRLRGYVKGLVSEEILPHSEVVRLSKKIKVGLALEEHKTRLPHA---LLVQIHIDYC------LPLSFHGGLIGLLRGIEKFDSSKGFKISTYVYWWI
+ + +R Y+K + +L E + L+ +I+ G EE K RL A L+V I Y L L G + GL++ +EKFD +KGFK STY WWI
Subjt: LQNRLRGYVKGLVSEEILPHSEVVRLSKKIKVGLALEEHKTRLPHA---LLVQIHIDYC------LPLSFHGGLIGLLRGIEKFDSSKGFKISTYVYWWI
Query: RQPKHKPIEKKTGYLSSKYLMQGVSRALVENSRTLRLPTHLHERLG-LIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEVLQISNSAISQYLFFI
R Q ++RA+ + +RT+R+P H+ E + LIR + LQ+ G PS + +AE ++++ +KV+ E+L+I+ +
Subjt: RQPKHKPIEKKTGYLSSKYLMQGVSRALVENSRTLRLPTHLHERLG-LIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEVLQISNSAISQYLFFI
Query: FLIKLTSHCFQAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINM--TLEDREREIIRLYHGLDN-ECLTWEEISKRI
SL GE S++ D + + +D + ++ +L ++ TL DRE ++RL GLD+ T EE+ K
Subjt: FLIKLTSHCFQAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINM--TLEDREREIIRLYHGLDN-ECLTWEEISKRI
Query: GLSRERVRQVGLVALEKLKKAAKMRKMEAML
G++RER+RQ+ AL KL+ ++ ++++ L
Subjt: GLSRERVRQVGLVALEKLKKAAKMRKMEAML
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| Q0J7T6 RNA polymerase sigma factor sigA | 1.3e-93 | 40.1 | Show/hide |
Query: ATAAIIGLGAAKRLLNSSSYYSDFTEKVLYL---------------NDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVD-----TP
AT A+IGL A RLL++S +D + L + +T K +A H SP + Q ++A++ H P
Subjt: ATAAIIGLGAAKRLLNSSSYYSDFTEKVLYL---------------NDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVD-----TP
Query: SSPTAEPWLNNTTIWEDEETDLKCTVEALLLLQKSMLEKQWNLSFE-----QTVSTDVPRGKTEK-KVPVTCSGVSARQRRMNSKRKIQSKHVFMAQPKI
P P + DL+ ++EA++LLQ+SMLEKQW L F+ + T K V V S VSARQRRM+ +R+ ++K
Subjt: SSPTAEPWLNNTTIWEDEETDLKCTVEALLLLQKSMLEKQWNLSFE-----QTVSTDVPRGKTEK-KVPVTCSGVSARQRRMNSKRKIQSKHVFMAQPKI
Query: SKQQKPSISPELLQNRLRGYVKGLVSEEILPHSEVVRLSKKIKVGLALEEHKTRL--------------------PHALLVQIHIDY----CLPLS----
+ ++SPEL+Q+R R Y++G VS+E+L H +VV LS KIK G+ L++ +++L P L ++H + L +S
Subjt: SKQQKPSISPELLQNRLRGYVKGLVSEEILPHSEVVRLSKKIKVGLALEEHKTRL--------------------PHALLVQIHIDY----CLPLS----
Query: ------------------FHGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQPKHKPIEKKTGYLSSKYLMQGVSRALVENSRTLRLPTHLHERLGLIRNA
GGLIGLLRGIEKFD+S+GF+ISTYVYWWIR QGVSRAL ENS+T RLPT+LHERL IR A
Subjt: ------------------FHGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQPKHKPIEKKTGYLSSKYLMQGVSRALVENSRTLRLPTHLHERLGLIRNA
Query: KVKLQEKGITPSIDRIAESLNMSKKKVKNATEVLQISNSAISQYLFFIFLIKLTSHCFQAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGT
K +L+++GI P+I+ IA SLN+S+KKV NATE A++KV SLD++AFPSLNGLPGET HSYI D + N+PWHG
Subjt: KVKLQEKGITPSIDRIAESLNMSKKKVKNATEVLQISNSAISQYLFFIFLIKLTSHCFQAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGT
Query: DTWSLKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRKMEAML
+ W LK EVNKL+N TL +RER+IIRLYHG+ +C TWE+IS++ GLSRERVRQVGL+A+EKLK AA+ + +EA+L
Subjt: DTWSLKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRKMEAML
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| Q5HNY7 RNA polymerase sigma factor SigA | 7.9e-22 | 28.66 | Show/hide |
Query: LQNRLRGYVKGLVSEEILPHSEVVRLSKKIKVGLALEEHKTRLPHA---LLVQIHIDYC------LPLSFHGGLIGLLRGIEKFDSSKGFKISTYVYWWI
+ + +R Y+K + +L E + L+K+I+ G E K+RL A L+V I Y L L G + GL++ +EKFD SKGFK STY WWI
Subjt: LQNRLRGYVKGLVSEEILPHSEVVRLSKKIKVGLALEEHKTRLPHA---LLVQIHIDYC------LPLSFHGGLIGLLRGIEKFDSSKGFKISTYVYWWI
Query: RQPKHKPIEKKTGYLSSKYLMQGVSRALVENSRTLRLPTHLHERLG-LIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEVLQISNSAISQYLFFI
R Q ++RA+ + +RT+R+P H+ E + LIR + LQ+ G P+ + I E +++ +KV+ E+L+I+ +
Subjt: RQPKHKPIEKKTGYLSSKYLMQGVSRALVENSRTLRLPTHLHERLG-LIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEVLQISNSAISQYLFFI
Query: FLIKLTSHCFQAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINM--TLEDREREIIRLYHGLDN-ECLTWEEISKRI
SL GE S++ D + +D + ++ +L ++ TL DRE ++RL GLD+ T EE+ K
Subjt: FLIKLTSHCFQAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINM--TLEDREREIIRLYHGLDN-ECLTWEEISKRI
Query: GLSRERVRQVGLVALEKLKKAAKMRKME
G++RER+RQ+ AL KL+ ++ ++++
Subjt: GLSRERVRQVGLVALEKLKKAAKMRKME
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| Q8CP24 RNA polymerase sigma factor SigA | 7.9e-22 | 28.66 | Show/hide |
Query: LQNRLRGYVKGLVSEEILPHSEVVRLSKKIKVGLALEEHKTRLPHA---LLVQIHIDYC------LPLSFHGGLIGLLRGIEKFDSSKGFKISTYVYWWI
+ + +R Y+K + +L E + L+K+I+ G E K+RL A L+V I Y L L G + GL++ +EKFD SKGFK STY WWI
Subjt: LQNRLRGYVKGLVSEEILPHSEVVRLSKKIKVGLALEEHKTRLPHA---LLVQIHIDYC------LPLSFHGGLIGLLRGIEKFDSSKGFKISTYVYWWI
Query: RQPKHKPIEKKTGYLSSKYLMQGVSRALVENSRTLRLPTHLHERLG-LIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEVLQISNSAISQYLFFI
R Q ++RA+ + +RT+R+P H+ E + LIR + LQ+ G P+ + I E +++ +KV+ E+L+I+ +
Subjt: RQPKHKPIEKKTGYLSSKYLMQGVSRALVENSRTLRLPTHLHERLG-LIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEVLQISNSAISQYLFFI
Query: FLIKLTSHCFQAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINM--TLEDREREIIRLYHGLDN-ECLTWEEISKRI
SL GE S++ D + +D + ++ +L ++ TL DRE ++RL GLD+ T EE+ K
Subjt: FLIKLTSHCFQAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINM--TLEDREREIIRLYHGLDN-ECLTWEEISKRI
Query: GLSRERVRQVGLVALEKLKKAAKMRKME
G++RER+RQ+ AL KL+ ++ ++++
Subjt: GLSRERVRQVGLVALEKLKKAAKMRKME
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G08540.1 RNApolymerase sigma subunit 2 | 1.6e-14 | 28.68 | Show/hide |
Query: GLIGLLRGIEKFDSSKGFKISTYVYWWIRQPKHKPIEKKTGYLSSKYLMQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKL-QEKGITPSIDRIAESL
G GL+RG EKFD++KGFK STY +WWI+ Q V ++L + SR +RLP H+ E ++ A+ +L E G P + IAE+
Subjt: GLIGLLRGIEKFDSSKGFKISTYVYWWIRQPKHKPIEKKTGYLSSKYLMQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKL-QEKGITPSIDRIAESL
Query: NMSKKKVKNATEVLQISNSAISQYLFFIFLIKLTSHCFQAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDR
+S K+ L + L SLD++ + N P E IAD + + ++ +++K+++ +L R
Subjt: NMSKKKVKNATEVLQISNSAISQYLFFIFLIKLTSHCFQAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDR
Query: EREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRKMEAMLL
E+++IR G+ D T +EI + +G+SRERVRQ+ A KLK + ++ L+
Subjt: EREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRKMEAMLL
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| AT1G64860.1 sigma factor A | 3.0e-149 | 55.42 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVDTPSSPTAEPWLNNTTIWE---
MATAA+IGL KRLL+SS Y+SD TEK L +NDH Q +++TKS + AK ++++SPS+P SNRH Q KA+KE VD S T +PWL N T E
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVDTPSSPTAEPWLNNTTIWE---
Query: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDVPRGKT--EKKVPV-TCSGVSARQRRMNSKRKIQSKHVFMAQPKISKQQKPSISPELLQNR
D++ + +VEA+LLLQKSMLEK WNLSFE+ VS++ P T +KK+PV TCSG+SARQRR+ +K+K HV ++S +
Subjt: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDVPRGKT--EKKVPV-TCSGVSARQRRMNSKRKIQSKHVFMAQPKISKQQKPSISPELLQNR
Query: LRGYVKGLVSEEILPHSEVVRLSKKIKVGLALEEHKTRLP-----------------------HALLVQIHI--------DYCLPLSF------------
+RGYVKG++SE++L H EVVRLSKKIK GL L++HK+RL A L++ H+ + L +S
Subjt: LRGYVKGLVSEEILPHSEVVRLSKKIKVGLALEEHKTRLP-----------------------HALLVQIHI--------DYCLPLSF------------
Query: ---HGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQPKHKPIEKKTGYLSSKYLMQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRI
GGLIGLLRGIEKFDSSKGF+ISTYVYWWIR QGVSRALV+NSRTLRLPTHLHERLGLIRNAK++LQEKGITPSIDRI
Subjt: ---HGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQPKHKPIEKKTGYLSSKYLMQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRI
Query: AESLNMSKKKVKNATEVLQISNSAISQYLFFIFLIKLTSHCFQAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMT
AESLNMS+KKV+NATE A+SKVFSLDR+AFPSLNGLPGETHHSYIAD RLENNPWHG D +LK EV+KLI+ T
Subjt: AESLNMSKKKVKNATEVLQISNSAISQYLFFIFLIKLTSHCFQAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMT
Query: LEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRKMEAMLLKH
L +RE+EIIRLY+GLD ECLTWE+ISKRIGLSRERVRQVGLVALEKLK AA+ RKMEAM+LK+
Subjt: LEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRKMEAMLLKH
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| AT1G64860.2 sigma factor A | 7.1e-135 | 53.5 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVDTPSSPTAEPWLNNTTIWE---
MATAA+IGL KRLL+SS Y+SD TEK L +NDH Q +++TKS + AK ++++SPS+P SNRH Q KA+KE VD S T +PWL N T E
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVDTPSSPTAEPWLNNTTIWE---
Query: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDVPRGKT--EKKVPV-TCSGVSARQRRMNSKRKIQSKHVFMAQPKISKQQKPSISPELLQNR
D++ + +VEA+LLLQKSMLEK WNLSFE+ VS++ P T +KK+PV TCSG+SARQRR+ +K+K HV ++S +
Subjt: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDVPRGKT--EKKVPV-TCSGVSARQRRMNSKRKIQSKHVFMAQPKISKQQKPSISPELLQNR
Query: LRGYVKGLVSEEILPHSEVVRLSKKIKVGLALEEHKTRLP-----------------------HALLVQIHI--------DYCLPLSF------------
+RGYVKG++SE++L H EVVRLSKKIK GL L++HK+RL A L++ H+ + L +S
Subjt: LRGYVKGLVSEEILPHSEVVRLSKKIKVGLALEEHKTRLP-----------------------HALLVQIHI--------DYCLPLSF------------
Query: ---HGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQPKHKPIEKKTGYLSSKYLMQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRI
GGLIGLLRGIEKFDSSKGF+ISTYVYWWIR QGVSRALV+NSRTLRLPTHLHERLGLIRNAK++LQEKGITPSIDRI
Subjt: ---HGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQPKHKPIEKKTGYLSSKYLMQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRI
Query: AESLNMSKKKVKNATEVLQISNSAISQYLFFIFLIKLTSHCFQAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMT
AESLNMS+KKV+NATE A+SKVFSLDR+AFPSLNGLPGETHHSYIAD RLENNPWHG D +LK EV+KLI+ T
Subjt: AESLNMSKKKVKNATEVLQISNSAISQYLFFIFLIKLTSHCFQAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMT
Query: LEDREREIIRLYHGLDNECLTWEEISKRI
L +RE+EIIRLY+GLD ECLTWE+ISKRI
Subjt: LEDREREIIRLYHGLDNECLTWEEISKRI
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| AT2G36990.1 RNApolymerase sigma-subunit F | 1.5e-12 | 26.42 | Show/hide |
Query: GLIGLLRGIEKFDSSKGFKISTYVYWWIRQPKHKPIEKKTGYLSSKYLMQGVSRALVENSRTLRLPTHLHERLGLIRNA-KVKLQEKGITPSIDRIAESL
G +GL++ +EKF G + +TY YWWIR Q + +++ +NSRT+RLP +++ LG + A K +QE PS + +A +
Subjt: GLIGLLRGIEKFDSSKGFKISTYVYWWIRQPKHKPIEKKTGYLSSKYLMQGVSRALVENSRTLRLPTHLHERLGLIRNA-KVKLQEKGITPSIDRIAESL
Query: NMSKKKVKNATEVLQISNSAISQYLFFIFLIKLTSHCFQAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDR
+S +K+ ++L + + +S + + D++ T D+ +E P ++ V L+N+ L +
Subjt: NMSKKKVKNATEVLQISNSAISQYLFFIFLIKLTSHCFQAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDR
Query: EREIIRLYHGLD-NECLTWEEISKRIGLSRERVRQVGLVALEKLKK
ER II+L G+D + + EI + GLS+ERVRQ+ AL +LK+
Subjt: EREIIRLYHGLD-NECLTWEEISKRIGLSRERVRQVGLVALEKLKK
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| AT5G13730.1 sigma factor 4 | 1.9e-18 | 31.1 | Show/hide |
Query: GLIGLLRGIEKFDSSKGFKISTYVYWWIRQPKHKPIEKKTGYLSSKYLMQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEK-GITPSIDRIAESL
G IGLLRG E+FD +G+K+STYVYWWI+ Q + RA+ SR ++LP + E + A L K PS + IAE L
Subjt: GLIGLLRGIEKFDSSKGFKISTYVYWWIRQPKHKPIEKKTGYLSSKYLMQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEK-GITPSIDRIAESL
Query: NMSKKKVKNATEVLQISNSAISQYLFFIFLIKLTSHCFQAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDR
N++ V+ A E S S + SLDR A + G I E P +K E+ +L+ +L R
Subjt: NMSKKKVKNATEVLQISNSAISQYLFFIFLIKLTSHCFQAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDR
Query: EREIIRLYHGLDNEC-LTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRKME
E ++ LY GL+ E +++EEI K + LSRERVRQ+ +AL+KL+ + ++
Subjt: EREIIRLYHGLDNEC-LTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRKME
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