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CmoCh02G005230 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G005230
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionGamma-zein like
Genome locationCmo_Chr02:2930281..2931947
RNA-Seq ExpressionCmoCh02G005230
SyntenyCmoCh02G005230
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605202.1 hypothetical protein SDJN03_02519, partial [Cucurbita argyrosperma subsp. sororia]1.6e-8299.4Show/hide
Query:  MAKLAEQESESKENMKNAMLKHEQTFRHQVYELHRLYRIQKLLMKNITENRGKTERWEVKNEDEDEEDEKESDFIEESEVELTLGPSNYSNQVGGGRRRR
        MAKLAEQES+SKENMKNAMLKHEQTFRHQVYELHRLYRIQKLLMKNITENRGKTERWEVKNEDEDEEDEKESDFIEESEVELTLGPSNYSNQVGGGRRRR
Subjt:  MAKLAEQESESKENMKNAMLKHEQTFRHQVYELHRLYRIQKLLMKNITENRGKTERWEVKNEDEDEEDEKESDFIEESEVELTLGPSNYSNQVGGGRRRR

Query:  RKSCFSSSSSSSTTGSAQKSRSFYRHGELVGSSEMGFVGFLEDEMRLSQHHPNPWLCQPLTLNLTS
        RKSCFSSSSSSSTTGSAQKSRSFYRHGELVGSSEMGFVGFLEDEMRLSQHHPNPWLCQPLTLNLTS
Subjt:  RKSCFSSSSSSSTTGSAQKSRSFYRHGELVGSSEMGFVGFLEDEMRLSQHHPNPWLCQPLTLNLTS

KAG7035180.1 hypothetical protein SDJN02_01975, partial [Cucurbita argyrosperma subsp. argyrosperma]8.2e-8298.8Show/hide
Query:  MAKLAEQESESKENMKNAMLKHEQTFRHQVYELHRLYRIQKLLMKNITENRGKTERWEVKNEDEDEEDEKESDFIEESEVELTLGPSNYSNQVGGGRRRR
        MAKLAEQES+SKENMKNAMLKHEQTFRHQVYELHRLYRIQKLLMKNI ENRGKTERWEVKNEDEDEEDEKESDFIEESEVELTLGPSNYSNQVGGGRRRR
Subjt:  MAKLAEQESESKENMKNAMLKHEQTFRHQVYELHRLYRIQKLLMKNITENRGKTERWEVKNEDEDEEDEKESDFIEESEVELTLGPSNYSNQVGGGRRRR

Query:  RKSCFSSSSSSSTTGSAQKSRSFYRHGELVGSSEMGFVGFLEDEMRLSQHHPNPWLCQPLTLNLTS
        RKSCFSSSSSSSTTGSAQKSRSFYRHGELVGSSEMGFVGFLEDEMRLSQHHPNPWLCQPLTLNLTS
Subjt:  RKSCFSSSSSSSTTGSAQKSRSFYRHGELVGSSEMGFVGFLEDEMRLSQHHPNPWLCQPLTLNLTS

XP_022947587.1 uncharacterized protein LOC111451410 [Cucurbita moschata]7.4e-83100Show/hide
Query:  MAKLAEQESESKENMKNAMLKHEQTFRHQVYELHRLYRIQKLLMKNITENRGKTERWEVKNEDEDEEDEKESDFIEESEVELTLGPSNYSNQVGGGRRRR
        MAKLAEQESESKENMKNAMLKHEQTFRHQVYELHRLYRIQKLLMKNITENRGKTERWEVKNEDEDEEDEKESDFIEESEVELTLGPSNYSNQVGGGRRRR
Subjt:  MAKLAEQESESKENMKNAMLKHEQTFRHQVYELHRLYRIQKLLMKNITENRGKTERWEVKNEDEDEEDEKESDFIEESEVELTLGPSNYSNQVGGGRRRR

Query:  RKSCFSSSSSSSTTGSAQKSRSFYRHGELVGSSEMGFVGFLEDEMRLSQHHPNPWLCQPLTLNLTS
        RKSCFSSSSSSSTTGSAQKSRSFYRHGELVGSSEMGFVGFLEDEMRLSQHHPNPWLCQPLTLNLTS
Subjt:  RKSCFSSSSSSSTTGSAQKSRSFYRHGELVGSSEMGFVGFLEDEMRLSQHHPNPWLCQPLTLNLTS

XP_023007023.1 uncharacterized protein LOC111499640 [Cucurbita maxima]1.1e-7895.21Show/hide
Query:  MAKLAEQESESKENMKNAMLKHEQTFRHQVYELHRLYRIQKLLMKNITENRGKTERWEVKNEDEDE-EDEKESDFIEESEVELTLGPSNYSNQVGGGRRR
        MAKLAEQES+SKENMKNAMLKHEQTFRHQVYELHRLYRIQKLLMKNITENRGKTERWEVKNE+E+E +DEK+SDFIEESEVELTLGPSNYSNQVGGGRRR
Subjt:  MAKLAEQESESKENMKNAMLKHEQTFRHQVYELHRLYRIQKLLMKNITENRGKTERWEVKNEDEDE-EDEKESDFIEESEVELTLGPSNYSNQVGGGRRR

Query:  RRKSCFSSSSSSSTTGSAQKSRSFYRHGELVGSSEMGFVGFLEDEMRLSQHHPNPWLCQPLTLNLTS
        RRKSCFSSSSSSSTTGSAQK+RSFYRHGELVG SEMGFVGFLEDEMRLSQHHPNPWLCQPLTLNLTS
Subjt:  RRKSCFSSSSSSSTTGSAQKSRSFYRHGELVGSSEMGFVGFLEDEMRLSQHHPNPWLCQPLTLNLTS

XP_023534353.1 uncharacterized protein LOC111795940 [Cucurbita pepo subsp. pepo]1.2e-8097.59Show/hide
Query:  MAKLAEQESESKENMKNAMLKHEQTFRHQVYELHRLYRIQKLLMKNITENRGKTERWEVKNEDEDEEDEKESDFIEESEVELTLGPSNYSNQVGGGRRRR
        MAKLAEQES+SKENMKNAMLKHEQTFRHQVYELHRLYRIQKLLMKNITENRGKTERWEVKNEDEDE+ EKESDFIEESEVELTLGPSNYSNQVGGGRRRR
Subjt:  MAKLAEQESESKENMKNAMLKHEQTFRHQVYELHRLYRIQKLLMKNITENRGKTERWEVKNEDEDEEDEKESDFIEESEVELTLGPSNYSNQVGGGRRRR

Query:  RKSCFSSSSSSSTTGSAQKSRSFYRHGELVGSSEMGFVGFLEDEMRLSQHHPNPWLCQPLTLNLTS
        RKSCFSSSSSSSTTGSAQKSRSFYRHGELVG SEMGFVGFLEDEMRLSQHHPNPWLCQPLTLNLTS
Subjt:  RKSCFSSSSSSSTTGSAQKSRSFYRHGELVGSSEMGFVGFLEDEMRLSQHHPNPWLCQPLTLNLTS

TrEMBL top hitse value%identityAlignment
A0A0A0LJL7 Uncharacterized protein7.5e-4160.77Show/hide
Query:  MAKLAEQESESKENMKNAMLKHEQTFRHQVYELHRLYRIQKLLMKNITE-NRGKTERWEVKNEDEDEEDEKESDFIEESEVELTLGPSNYSNQVGGGRRR
        MA L EQ S SK NMK AML HEQTFRHQVYELHRLYRIQK+LMKNI E NRGKTE      E+E+EE E+E DFIEES++ELTLGPSNY+NQ GG  R 
Subjt:  MAKLAEQESESKENMKNAMLKHEQTFRHQVYELHRLYRIQKLLMKNITE-NRGKTERWEVKNEDEDEEDEKESDFIEESEVELTLGPSNYSNQVGGGRRR

Query:  RRK------------SCFSSSSSSSTTGSAQKSRSFYR-HGELVGSSEMGFVGFL--EDEMRLSQHHPNPWLCQPLTLNLT
        R +                S+SSSST GS QK + FYR +GE V  S+MGF+GFL  +D++++S HHPNPWL Q ++LNLT
Subjt:  RRK------------SCFSSSSSSSTTGSAQKSRSFYR-HGELVGSSEMGFVGFL--EDEMRLSQHHPNPWLCQPLTLNLT

A0A1S3C5U9 uncharacterized protein LOC1034973801.5e-4161.33Show/hide
Query:  MAKLAEQESESKENMKNAMLKHEQTFRHQVYELHRLYRIQKLLMKNITE-NRGKTERWEVKNEDEDEEDEKESDFIEESEVELTLGPSNYSNQVGGGRRR
        MA L EQ S SK NMK AML HEQTFRHQVYELHRLYRIQK+LMKNI E NRGKTE      E+E+EE E+E DFIEESE+ELTLGPSNY+NQ+GG  R 
Subjt:  MAKLAEQESESKENMKNAMLKHEQTFRHQVYELHRLYRIQKLLMKNITE-NRGKTERWEVKNEDEDEEDEKESDFIEESEVELTLGPSNYSNQVGGGRRR

Query:  RRK------------SCFSSSSSSSTTGSAQKSRSFYR-HGELVGSSEMGFVGFL--EDEMRLSQHHPNPWLCQPLTLNLT
        R +                S+SSSST GS QK + FYR +GE V  S+MGF+GFL  +D++++S HHPNPWL Q ++LNLT
Subjt:  RRK------------SCFSSSSSSSTTGSAQKSRSFYR-HGELVGSSEMGFVGFL--EDEMRLSQHHPNPWLCQPLTLNLT

A0A6J1EXP9 uncharacterized protein LOC1114394732.2e-4063.8Show/hide
Query:  ESESKENMKNAMLKHEQTFRHQVYELHRLYRIQKLLMKNITENRGKTERWEVKNEDEDEEDEKESDFIEESEVELTLGPSNYSNQVGGGRRRRRK-----
        ES  K N+K AML HE TFRHQVYELHRLYRIQK+LMKNI ENRGKT       E+E+EE+ +E +FI+ESE+ELTLGPS+YSNQVGG RRRR+K     
Subjt:  ESESKENMKNAMLKHEQTFRHQVYELHRLYRIQKLLMKNITENRGKTERWEVKNEDEDEEDEKESDFIEESEVELTLGPSNYSNQVGGGRRRRRK-----

Query:  SCFSSSSSSSTTGSAQKSRSFYRHGELVGSSEMGFVGFLEDEMRLSQHHPNPWLCQPLTLNLT
           S SSSSSTTGSA K    YR GE +G  E      L+DE RL+QHHPNPWLCQ ++LNLT
Subjt:  SCFSSSSSSSTTGSAQKSRSFYRHGELVGSSEMGFVGFLEDEMRLSQHHPNPWLCQPLTLNLT

A0A6J1G6V7 uncharacterized protein LOC1114514103.6e-83100Show/hide
Query:  MAKLAEQESESKENMKNAMLKHEQTFRHQVYELHRLYRIQKLLMKNITENRGKTERWEVKNEDEDEEDEKESDFIEESEVELTLGPSNYSNQVGGGRRRR
        MAKLAEQESESKENMKNAMLKHEQTFRHQVYELHRLYRIQKLLMKNITENRGKTERWEVKNEDEDEEDEKESDFIEESEVELTLGPSNYSNQVGGGRRRR
Subjt:  MAKLAEQESESKENMKNAMLKHEQTFRHQVYELHRLYRIQKLLMKNITENRGKTERWEVKNEDEDEEDEKESDFIEESEVELTLGPSNYSNQVGGGRRRR

Query:  RKSCFSSSSSSSTTGSAQKSRSFYRHGELVGSSEMGFVGFLEDEMRLSQHHPNPWLCQPLTLNLTS
        RKSCFSSSSSSSTTGSAQKSRSFYRHGELVGSSEMGFVGFLEDEMRLSQHHPNPWLCQPLTLNLTS
Subjt:  RKSCFSSSSSSSTTGSAQKSRSFYRHGELVGSSEMGFVGFLEDEMRLSQHHPNPWLCQPLTLNLTS

A0A6J1L6K1 uncharacterized protein LOC1114996405.3e-7995.21Show/hide
Query:  MAKLAEQESESKENMKNAMLKHEQTFRHQVYELHRLYRIQKLLMKNITENRGKTERWEVKNEDEDE-EDEKESDFIEESEVELTLGPSNYSNQVGGGRRR
        MAKLAEQES+SKENMKNAMLKHEQTFRHQVYELHRLYRIQKLLMKNITENRGKTERWEVKNE+E+E +DEK+SDFIEESEVELTLGPSNYSNQVGGGRRR
Subjt:  MAKLAEQESESKENMKNAMLKHEQTFRHQVYELHRLYRIQKLLMKNITENRGKTERWEVKNEDEDE-EDEKESDFIEESEVELTLGPSNYSNQVGGGRRR

Query:  RRKSCFSSSSSSSTTGSAQKSRSFYRHGELVGSSEMGFVGFLEDEMRLSQHHPNPWLCQPLTLNLTS
        RRKSCFSSSSSSSTTGSAQK+RSFYRHGELVG SEMGFVGFLEDEMRLSQHHPNPWLCQPLTLNLTS
Subjt:  RRKSCFSSSSSSSTTGSAQKSRSFYRHGELVGSSEMGFVGFLEDEMRLSQHHPNPWLCQPLTLNLTS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G67390.1 unknown protein2.1e-1136.05Show/hide
Query:  KENMKNAMLKHEQTFRHQVYELHRLYRIQKLLMKNITENRGKTERWEVKN------EDEDEEDEKESDF---------IEESEVELTLGPSNYSNQVGGG
        K+ MK AMLKHE+TF+ QVYELHRLY++QK+LMKN+  N+  T+   V +         D E ++ ++F         ++ESE+ELTLGPS Y    G  
Subjt:  KENMKNAMLKHEQTFRHQVYELHRLYRIQKLLMKNITENRGKTERWEVKN------EDEDEEDEKESDF---------IEESEVELTLGPSNYSNQVGGG

Query:  RRRRRKSCFSSSSSSSTTGSAQKSRSFYRHGELVGSSEMGFVGFLEDEMR----LSQHHPNPWLCQPLTLNL
          R  K    +S      GS    R  +       S+       LE+++R    +      PWL Q LTLN+
Subjt:  RRRRRKSCFSSSSSSSTTGSAQKSRSFYRHGELVGSSEMGFVGFLEDEMR----LSQHHPNPWLCQPLTLNL

AT5G67390.2 unknown protein2.1e-1136.05Show/hide
Query:  KENMKNAMLKHEQTFRHQVYELHRLYRIQKLLMKNITENRGKTERWEVKN------EDEDEEDEKESDF---------IEESEVELTLGPSNYSNQVGGG
        K+ MK AMLKHE+TF+ QVYELHRLY++QK+LMKN+  N+  T+   V +         D E ++ ++F         ++ESE+ELTLGPS Y    G  
Subjt:  KENMKNAMLKHEQTFRHQVYELHRLYRIQKLLMKNITENRGKTERWEVKN------EDEDEEDEKESDF---------IEESEVELTLGPSNYSNQVGGG

Query:  RRRRRKSCFSSSSSSSTTGSAQKSRSFYRHGELVGSSEMGFVGFLEDEMR----LSQHHPNPWLCQPLTLNL
          R  K    +S      GS    R  +       S+       LE+++R    +      PWL Q LTLN+
Subjt:  RRRRRKSCFSSSSSSSTTGSAQKSRSFYRHGELVGSSEMGFVGFLEDEMR----LSQHHPNPWLCQPLTLNL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAGCTGGCAGAACAGGAATCTGAGAGCAAGGAGAACATGAAGAACGCCATGTTAAAGCACGAGCAGACATTTCGTCATCAAGTGTATGAACTCCACAGATTGTA
CAGAATTCAGAAGCTTTTGATGAAGAACATAACAGAAAACAGAGGAAAAACAGAGAGATGGGAAGTGAAAAATGAAGATGAAGATGAAGAAGATGAAAAAGAGAGTGATT
TTATTGAAGAAAGTGAGGTTGAATTGACATTGGGACCTTCAAATTACAGCAATCAAGTTGGTGGAGGAAGGAGAAGAAGAAGAAAGAGCTGCTTCTCTTCTTCTTCTTCG
TCTTCAACCACTGGCTCTGCTCAAAAAAGTCGAAGCTTTTACAGACACGGTGAGCTTGTTGGTAGCTCTGAAATGGGGTTTGTGGGGTTTCTTGAAGATGAGATGAGGCT
TTCACAGCACCATCCAAATCCATGGCTTTGTCAACCTCTAACCCTTAATCTCACTTCATAA
mRNA sequenceShow/hide mRNA sequence
CTCTCTCTTGCTGCTCATTTCTGGCTCTTCTCTCTCTCTTTCAGGCAAAAATCCAAACCTCTCCTTCTTCCATCATCCATTTCTAACACCCAACACAAAGCTCCAAAATT
GGCACATCAATGGCGAAGCTGGCAGAACAGGAATCTGAGAGCAAGGAGAACATGAAGAACGCCATGTTAAAGCACGAGCAGACATTTCGTCATCAAGTGTATGAACTCCA
CAGATTGTACAGAATTCAGAAGCTTTTGATGAAGAACATAACAGAAAACAGAGGAAAAACAGAGAGATGGGAAGTGAAAAATGAAGATGAAGATGAAGAAGATGAAAAAG
AGAGTGATTTTATTGAAGAAAGTGAGGTTGAATTGACATTGGGACCTTCAAATTACAGCAATCAAGTTGGTGGAGGAAGGAGAAGAAGAAGAAAGAGCTGCTTCTCTTCT
TCTTCTTCGTCTTCAACCACTGGCTCTGCTCAAAAAAGTCGAAGCTTTTACAGACACGGTGAGCTTGTTGGTAGCTCTGAAATGGGGTTTGTGGGGTTTCTTGAAGATGA
GATGAGGCTTTCACAGCACCATCCAAATCCATGGCTTTGTCAACCTCTAACCCTTAATCTCACTTCATAAACACTTTGATTCTTTTATGTTCTGCTTATTTTTTAGTTTT
CTTGGCTGATTGGGCGTCTAATCTTCTCTTTGTACAAGTTTATAACCAAGTTAGTATAATTATCATCATTGCGCGCCTTTTAGGTCTTGTTTGATAATCATTTGTTGGGT
CGTTAACTTTTACGAGTCGTTCAACCCGAG
Protein sequenceShow/hide protein sequence
MAKLAEQESESKENMKNAMLKHEQTFRHQVYELHRLYRIQKLLMKNITENRGKTERWEVKNEDEDEEDEKESDFIEESEVELTLGPSNYSNQVGGGRRRRRKSCFSSSSS
SSTTGSAQKSRSFYRHGELVGSSEMGFVGFLEDEMRLSQHHPNPWLCQPLTLNLTS