; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh02G005390 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G005390
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionVQ domain-containing protein
Genome locationCmo_Chr02:3063936..3064211
RNA-Seq ExpressionCmoCh02G005390
SyntenyCmoCh02G005390
Gene Ontology termsNA
InterPro domainsIPR008889 - VQ
IPR039610 - VQ motif-containing protein 29


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045761.1 VQ motif-containing protein 29 [Cucumis melo var. makuwa]1.5e-1357.83Show/hide
Query:  MEPHSYSSSSSSFSFYYSDPDGVHKASSRSPKKAVAPPPPMPPRVYKVEPIEFRDVVQKLTSPPEYLDPRLKAMPAPRPNLSN
        MEPH       SFSFYY+D      +  ++ KKAVAPP P PP+VYKV+PI FRDVVQKLT+ PE+ D RL+AMP PRPN+++
Subjt:  MEPHSYSSSSSSFSFYYSDPDGVHKASSRSPKKAVAPPPPMPPRVYKVEPIEFRDVVQKLTSPPEYLDPRLKAMPAPRPNLSN

KAE8651906.1 hypothetical protein Csa_006780 [Cucumis sativus]6.4e-1255.42Show/hide
Query:  MEPHSYSSSSSSFSFYYSDPDGVHKASSRSPKKAVAPPPPMPPRVYKVEPIEFRDVVQKLTSPPEYLDPRLKAMPAPRPNLSN
        MEPH       SFSFYY D         ++ KK VAPP P PP+VYKV+PI FRDVVQKLT+ P++ D RL+AMP PRP+L++
Subjt:  MEPHSYSSSSSSFSFYYSDPDGVHKASSRSPKKAVAPPPPMPPRVYKVEPIEFRDVVQKLTSPPEYLDPRLKAMPAPRPNLSN

KAF4375170.1 hypothetical protein F8388_017316 [Cannabis sativa]2.3e-0953.76Show/hide
Query:  MEPHSYSSSSSSFS---FYYSDPDGVHKASSRSP-KKAVAPPPPMPPRVYKVEPIEFRDVVQKLTSPPEY-LDPRLKAMPAPRPNLSN--PPP
        ME +SYSSSSS+ S   +Y S    V KA++  P KK VAP PP PPRVY+V+PI FRD+VQKLT+ PE+ LDP  +  P P+  L +  PPP
Subjt:  MEPHSYSSSSSSFS---FYYSDPDGVHKASSRSP-KKAVAPPPPMPPRVYKVEPIEFRDVVQKLTSPPEY-LDPRLKAMPAPRPNLSN--PPP

KAG6605217.1 hypothetical protein SDJN03_02534, partial [Cucurbita argyrosperma subsp. sororia]7.7e-42100Show/hide
Query:  MEPHSYSSSSSSFSFYYSDPDGVHKASSRSPKKAVAPPPPMPPRVYKVEPIEFRDVVQKLTSPPEYLDPRLKAMPAPRPNLSNPPPCSSRR
        MEPHSYSSSSSSFSFYYSDPDGVHKASSRSPKKAVAPPPPMPPRVYKVEPIEFRDVVQKLTSPPEYLDPRLKAMPAPRPNLSNPPPCSSRR
Subjt:  MEPHSYSSSSSSFSFYYSDPDGVHKASSRSPKKAVAPPPPMPPRVYKVEPIEFRDVVQKLTSPPEYLDPRLKAMPAPRPNLSNPPPCSSRR

XP_022149539.1 VQ motif-containing protein 29 [Momordica charantia]1.7e-0950.56Show/hide
Query:  MEPHSYSSSSSSFSFYYSDPDGVHKASSRSPKKAVAPPPPMPPRVYKVEPIEFRDVVQKLTSPPEYLDPRLKAMPAPRPNLSNPPPCSS
        MEPHS SSS                 + +   +AVAP PP PP++YKV P++FRDVVQKLT+ PE+ D RL+AMPAPRP   +PPP S+
Subjt:  MEPHSYSSSSSSFSFYYSDPDGVHKASSRSPKKAVAPPPPMPPRVYKVEPIEFRDVVQKLTSPPEYLDPRLKAMPAPRPNLSNPPPCSS

TrEMBL top hitse value%identityAlignment
A0A0A0LPS3 VQ domain-containing protein6.4e-1063.64Show/hide
Query:  RSPKKAVAPPPPMPPRVYKVEPIEFRDVVQKLTSPPEYLDPRLKAMPAPRPNLSN
        ++ KK VAPP P PP+VYKV+PI FRDVVQKLT+ P++ D RL+AMP PRP+L++
Subjt:  RSPKKAVAPPPPMPPRVYKVEPIEFRDVVQKLTSPPEYLDPRLKAMPAPRPNLSN

A0A5A7TW54 VQ motif-containing protein 297.3e-1457.83Show/hide
Query:  MEPHSYSSSSSSFSFYYSDPDGVHKASSRSPKKAVAPPPPMPPRVYKVEPIEFRDVVQKLTSPPEYLDPRLKAMPAPRPNLSN
        MEPH       SFSFYY+D      +  ++ KKAVAPP P PP+VYKV+PI FRDVVQKLT+ PE+ D RL+AMP PRPN+++
Subjt:  MEPHSYSSSSSSFSFYYSDPDGVHKASSRSPKKAVAPPPPMPPRVYKVEPIEFRDVVQKLTSPPEYLDPRLKAMPAPRPNLSN

A0A6J1D7B4 VQ motif-containing protein 298.4e-1050.56Show/hide
Query:  MEPHSYSSSSSSFSFYYSDPDGVHKASSRSPKKAVAPPPPMPPRVYKVEPIEFRDVVQKLTSPPEYLDPRLKAMPAPRPNLSNPPPCSS
        MEPHS SSS                 + +   +AVAP PP PP++YKV P++FRDVVQKLT+ PE+ D RL+AMPAPRP   +PPP S+
Subjt:  MEPHSYSSSSSSFSFYYSDPDGVHKASSRSPKKAVAPPPPMPPRVYKVEPIEFRDVVQKLTSPPEYLDPRLKAMPAPRPNLSNPPPCSS

A0A7J6FZD7 VQ domain-containing protein1.1e-0953.76Show/hide
Query:  MEPHSYSSSSSSFS---FYYSDPDGVHKASSRSP-KKAVAPPPPMPPRVYKVEPIEFRDVVQKLTSPPEY-LDPRLKAMPAPRPNLSN--PPP
        ME +SYSSSSS+ S   +Y S    V KA++  P KK VAP PP PPRVY+V+PI FRD+VQKLT+ PE+ LDP  +  P P+  L +  PPP
Subjt:  MEPHSYSSSSSSFS---FYYSDPDGVHKASSRSP-KKAVAPPPPMPPRVYKVEPIEFRDVVQKLTSPPEY-LDPRLKAMPAPRPNLSN--PPP

A0A803PEA2 Uncharacterized protein3.2e-0953.85Show/hide
Query:  MEPHSYSSSSSSFS---FYYSDPDGVHKASSRSP-KKAVAPPPPMPPRVYKVEPIEFRDVVQKLTSPPEY-LDPRLKAMPAPRPNLSNPPP
        ME +SYSSSSS+ S   +Y S    V KA++  P KK VAP PP PPRVY+V+PI FRD+VQKLT+ PE+ LDP  +  P  R     PPP
Subjt:  MEPHSYSSSSSSFS---FYYSDPDGVHKASSRSP-KKAVAPPPPMPPRVYKVEPIEFRDVVQKLTSPPEY-LDPRLKAMPAPRPNLSNPPP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACCTCACTCCTACTCTTCTTCTTCTTCTTCCTTTTCCTTTTACTACTCCGACCCCGACGGAGTTCACAAGGCATCGTCGAGGTCGCCGAAGAAGGCGGTTGCACC
TCCGCCTCCGATGCCTCCGAGGGTTTACAAAGTGGAGCCCATCGAGTTTCGAGATGTCGTTCAGAAGCTAACTTCACCTCCCGAGTATCTAGATCCTCGCCTTAAAGCCA
TGCCGGCTCCACGCCCAAATCTCTCCAATCCGCCGCCGTGCTCTTCCCGCCGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAACCTCACTCCTACTCTTCTTCTTCTTCTTCCTTTTCCTTTTACTACTCCGACCCCGACGGAGTTCACAAGGCATCGTCGAGGTCGCCGAAGAAGGCGGTTGCACC
TCCGCCTCCGATGCCTCCGAGGGTTTACAAAGTGGAGCCCATCGAGTTTCGAGATGTCGTTCAGAAGCTAACTTCACCTCCCGAGTATCTAGATCCTCGCCTTAAAGCCA
TGCCGGCTCCACGCCCAAATCTCTCCAATCCGCCGCCGTGCTCTTCCCGCCGCTGA
Protein sequenceShow/hide protein sequence
MEPHSYSSSSSSFSFYYSDPDGVHKASSRSPKKAVAPPPPMPPRVYKVEPIEFRDVVQKLTSPPEYLDPRLKAMPAPRPNLSNPPPCSSRR