; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh02G005400 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G005400
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptioncysteine-rich and transmembrane domain-containing protein WIH1-like
Genome locationCmo_Chr02:3066550..3067533
RNA-Seq ExpressionCmoCh02G005400
SyntenyCmoCh02G005400
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR028144 - Cysteine-rich transmembrane CYSTM domain
IPR044850 - Cysteine-rich and transmembrane domain-containing protein WIH1/2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605218.1 hypothetical protein SDJN03_02535, partial [Cucurbita argyrosperma subsp. sororia]2.1e-4198.85Show/hide
Query:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPTAQGYPPPPPPPVYAPQYAPTTQQPPPKDKTGCLEGCLAALCCCCLLDACF
        MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPTAQGYPPPPPPPVYAP YAPTTQQPPPKDKTGCLEGCLAALCCCCLLDACF
Subjt:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPTAQGYPPPPPPPVYAPQYAPTTQQPPPKDKTGCLEGCLAALCCCCLLDACF

KAG7035191.1 hypothetical protein SDJN02_01986, partial [Cucurbita argyrosperma subsp. argyrosperma]8.2e-33100Show/hide
Query:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPTAQGYPPPPPPPVYAPQYAPTTQQPPPKDKTGCLEG
        MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPTAQGYPPPPPPPVYAPQYAPTTQQPPPKDKTGCLEG
Subjt:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPTAQGYPPPPPPPVYAPQYAPTTQQPPPKDKTGCLEG

XP_022947084.1 cysteine-rich and transmembrane domain-containing protein WIH1-like isoform X1 [Cucurbita moschata]8.2e-33100Show/hide
Query:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPTAQGYPPPPPPPVYAPQYAPTTQQPPPKDKTGCLEG
        MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPTAQGYPPPPPPPVYAPQYAPTTQQPPPKDKTGCLEG
Subjt:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPTAQGYPPPPPPPVYAPQYAPTTQQPPPKDKTGCLEG

XP_022947085.1 cysteine-rich and transmembrane domain-containing protein WIH1-like isoform X2 [Cucurbita moschata]4.3e-42100Show/hide
Query:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPTAQGYPPPPPPPVYAPQYAPTTQQPPPKDKTGCLEGCLAALCCCCLLDACF
        MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPTAQGYPPPPPPPVYAPQYAPTTQQPPPKDKTGCLEGCLAALCCCCLLDACF
Subjt:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPTAQGYPPPPPPPVYAPQYAPTTQQPPPKDKTGCLEGCLAALCCCCLLDACF

XP_023006883.1 cysteine-rich and transmembrane domain-containing protein WIH1-like [Cucurbita maxima]9.0e-4096.55Show/hide
Query:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPTAQGYPPPPPPPVYAPQYAPTTQQPPPKDKTGCLEGCLAALCCCCLLDACF
        MSYYDHQQPPVGAPPPQG PPKDAYPPPGYPVQGYPTAQ YPPPPPPPVYAPQYAPTTQQP PKDKTGCLEGCLAALCCCCLLDACF
Subjt:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPTAQGYPPPPPPPVYAPQYAPTTQQPPPKDKTGCLEGCLAALCCCCLLDACF

TrEMBL top hitse value%identityAlignment
A0A0A0LJA6 CYSTM domain-containing protein5.2e-3387.5Show/hide
Query:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPTAQGYPPPPPPPVYAPQYAPTTQQPPPKDK-TGCLEGCLAALCCCCLLDACF
        MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYP AQGYPPPPPPP   P YAP   QPPPK++ TGCLEGCLAALCCCCLLDACF
Subjt:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPTAQGYPPPPPPPVYAPQYAPTTQQPPPKDK-TGCLEGCLAALCCCCLLDACF

A0A1S3C5S7 cysteine-rich and transmembrane domain-containing protein A-like1.2e-3286.36Show/hide
Query:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPTAQGYPPPPPPPVYAPQYAPTTQQPPPK-DKTGCLEGCLAALCCCCLLDACF
        MSYYDHQQPPVGAPPPQGFPPKD+YPPPGYPVQGYP AQGYPPPPPPP   P YAP   QPPPK + TGCLEGCLAALCCCCLLDACF
Subjt:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPTAQGYPPPPPPPVYAPQYAPTTQQPPPK-DKTGCLEGCLAALCCCCLLDACF

A0A6J1G5R9 cysteine-rich and transmembrane domain-containing protein WIH1-like isoform X14.0e-33100Show/hide
Query:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPTAQGYPPPPPPPVYAPQYAPTTQQPPPKDKTGCLEG
        MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPTAQGYPPPPPPPVYAPQYAPTTQQPPPKDKTGCLEG
Subjt:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPTAQGYPPPPPPPVYAPQYAPTTQQPPPKDKTGCLEG

A0A6J1G5U7 cysteine-rich and transmembrane domain-containing protein WIH1-like isoform X22.1e-42100Show/hide
Query:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPTAQGYPPPPPPPVYAPQYAPTTQQPPPKDKTGCLEGCLAALCCCCLLDACF
        MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPTAQGYPPPPPPPVYAPQYAPTTQQPPPKDKTGCLEGCLAALCCCCLLDACF
Subjt:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPTAQGYPPPPPPPVYAPQYAPTTQQPPPKDKTGCLEGCLAALCCCCLLDACF

A0A6J1L666 cysteine-rich and transmembrane domain-containing protein WIH1-like4.4e-4096.55Show/hide
Query:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPTAQGYPPPPPPPVYAPQYAPTTQQPPPKDKTGCLEGCLAALCCCCLLDACF
        MSYYDHQQPPVGAPPPQG PPKDAYPPPGYPVQGYPTAQ YPPPPPPPVYAPQYAPTTQQP PKDKTGCLEGCLAALCCCCLLDACF
Subjt:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPTAQGYPPPPPPPVYAPQYAPTTQQPPPKDKTGCLEGCLAALCCCCLLDACF

SwissProt top hitse value%identityAlignment
A5PLE2 Cysteine-rich and transmembrane domain-containing protein 17.5e-0546Show/hide
Query:  YDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPTAQGYP--PPPPPPVYA--PQYAPTTQQPPP------------KDKTG---CLEGCLAALCCCCLLD
        Y  Q  P    P QG+P +  YPP GYP QGYP AQGYP  PP PP  Y   P Y    Q  PP             D++G   CL  C AALCCCCL D
Subjt:  YDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPTAQGYP--PPPPPPVYA--PQYAPTTQQPPP------------KDKTG---CLEGCLAALCCCCLLD

O16005 Rhodopsin6.3e-0457.38Show/hide
Query:  PPVGAPPPQGFPPKDA---YPPPGY--PVQGYPTAQGYPPP--PPPPVYAPQYAPTTQQPP
        PP G  PPQG+PP  A   YPP GY  P QGYP AQGYPP   PPP    PQ AP    PP
Subjt:  PPVGAPPPQGFPPKDA---YPPPGY--PVQGYPTAQGYPPP--PPPPVYAPQYAPTTQQPP

Q8LCL8 Cysteine-rich and transmembrane domain-containing protein B5.4e-1152.53Show/hide
Query:  QQPP-VGAPPPQGF----PPKDAYPPPG--YPVQGYPTAQGYPPPPPPPV-----------YAPQYAPTTQQPPPKDKTGCLEGCLAALCCCCLLDACF
        QQPP VG PP   +    PPKDAYPPPG  YP QGYP  QGYP    PP            Y  Q  P  QQ   K   G LEGC+AALCC C+LDACF
Subjt:  QQPP-VGAPPPQGF----PPKDAYPPPG--YPVQGYPTAQGYPPPPPPPV-----------YAPQYAPTTQQPPPKDKTGCLEGCLAALCCCCLLDACF

Q8S8M0 Cysteine-rich and transmembrane domain-containing protein WIH25.3e-1960Show/hide
Query:  MSYYDHQQPPVGAPPPQGFP----PKDAYPPPGYPVQGYP---------TAQGYPPPPPPPVYAPQYAPTTQQPPPKDKTGCLEGCLAALCCCCLLDACF
        MS Y+  QPPVG PPPQG+P    PKDAYPP GYP QGYP           QGYP    PP YAPQY P  Q    +   G LEGCLAALCCCCLLDACF
Subjt:  MSYYDHQQPPVGAPPPQGFP----PKDAYPPPGYPVQGYP---------TAQGYPPPPPPPVYAPQYAPTTQQPPPKDKTGCLEGCLAALCCCCLLDACF

Q9FJW3 Cysteine-rich and transmembrane domain-containing protein WIH11.3e-1764.37Show/hide
Query:  YDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPT---AQGYPPPPPPPVYAPQYAPTTQQPPPKDKTGCLEGCLAALCCCCLLDACF
        Y  +Q PVGAPPPQG+PPKD YPP GYP  GYP    AQGYP    PP   PQY   +Q P  K   G LEGCLAALCCCCLLDACF
Subjt:  YDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPT---AQGYPPPPPPPVYAPQYAPTTQQPPPKDKTGCLEGCLAALCCCCLLDACF

Arabidopsis top hitse value%identityAlignment
AT1G12810.1 proline-rich family protein2.6e-0539.29Show/hide
Query:  YYDHQQPP--VGAPPPQGFPP----KDAYPPP----GYP----------VQGYPTAQGYP-----PPPPPPVYAPQYAPTTQQPPPKDKTGC---LEGCL
        Y  H  PP    APPP G+P      + YPPP    GYP           QGY    GYP     PPPPPP     +            +GC   + GCL
Subjt:  YYDHQQPP--VGAPPPQGFPP----KDAYPPP----GYP----------VQGYPTAQGYP-----PPPPPPVYAPQYAPTTQQPPPKDKTGC---LEGCL

Query:  AALCCCCLLDAC
        AALCCCCLL+ C
Subjt:  AALCCCCLLDAC

AT2G41420.1 proline-rich family protein3.8e-2060Show/hide
Query:  MSYYDHQQPPVGAPPPQGFP----PKDAYPPPGYPVQGYP---------TAQGYPPPPPPPVYAPQYAPTTQQPPPKDKTGCLEGCLAALCCCCLLDACF
        MS Y+  QPPVG PPPQG+P    PKDAYPP GYP QGYP           QGYP    PP YAPQY P  Q    +   G LEGCLAALCCCCLLDACF
Subjt:  MSYYDHQQPPVGAPPPQGFP----PKDAYPPPGYPVQGYP---------TAQGYPPPPPPPVYAPQYAPTTQQPPPKDKTGCLEGCLAALCCCCLLDACF

AT3G49845.1 unknown protein9.1e-1445.67Show/hide
Query:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPV---------------------------QGYPTAQGYPPPPPPPVYAPQYAPTTQQPPP----------
        MSY D Q  PV APPPQG+PPK+ YPP GYP                            QGYP AQGYPPP  P  + PQY P    PPP          
Subjt:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPV---------------------------QGYPTAQGYPPPPPPPVYAPQYAPTTQQPPP----------

Query:  ---KDKTGCLEGCLAALCCCCLLDACF
           KD  G +EGCLA LCCC LL+ACF
Subjt:  ---KDKTGCLEGCLAALCCCCLLDACF

AT4G33660.1 unknown protein6.9e-0649.35Show/hide
Query:  PVGAPPPQGFPPKDAYPPPGYPVQGYPTAQGYPPPPPPPVYAPQYAPTTQQPPPKDKTGCLEGCLAALCCCCLLDAC
        P G PPP G PP+  YPPP             PPPPPPP            PPP+ K G LEG LAALCCCCL+D C
Subjt:  PVGAPPPQGFPPKDAYPPPGYPVQGYPTAQGYPPPPPPPVYAPQYAPTTQQPPPKDKTGCLEGCLAALCCCCLLDAC

AT5G67600.1 unknown protein9.3e-1964.37Show/hide
Query:  YDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPT---AQGYPPPPPPPVYAPQYAPTTQQPPPKDKTGCLEGCLAALCCCCLLDACF
        Y  +Q PVGAPPPQG+PPKD YPP GYP  GYP    AQGYP    PP   PQY   +Q P  K   G LEGCLAALCCCCLLDACF
Subjt:  YDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPT---AQGYPPPPPPPVYAPQYAPTTQQPPPKDKTGCLEGCLAALCCCCLLDACF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTACTACGACCACCAACAGCCGCCGGTTGGGGCTCCGCCGCCACAAGGGTTCCCTCCCAAGGACGCTTACCCTCCGCCTGGGTACCCCGTTCAGGGCTACCCTAC
GGCTCAAGGGTACCCCCCTCCTCCGCCGCCGCCGGTGTATGCCCCACAGTACGCTCCGACTACTCAGCAGCCTCCTCCCAAGGACAAAACTGGTTGCCTTGAAGGATGTT
TAGCAGCACTTTGCTGTTGCTGTCTCTTGGATGCTTGCTTCTGA
mRNA sequenceShow/hide mRNA sequence
CTTTTGATGCAAATTTCCTTCATTCCAAGAAATCTATAACCCAAATTCCAATTCCTTTCATTTTCAACACCATTCAATTTCTATTCCCGTTCAGTTTATTCTATTCCCAC
TCTTTTCCCTCATCAATTTAACCATTCCTCTCAATTTCTCCCCTTCAAATTGAATCAAATTCCTCGCCGGAATCCTCCCCCATTATCATGAGCTACTACGACCACCAACA
GCCGCCGGTTGGGGCTCCGCCGCCACAAGGGTTCCCTCCCAAGGACGCTTACCCTCCGCCTGGGTACCCCGTTCAGGGCTACCCTACGGCTCAAGGGTACCCCCCTCCTC
CGCCGCCGCCGGTGTATGCCCCACAGTACGCTCCGACTACTCAGCAGCCTCCTCCCAAGGACAAAACTGGTTGCCTTGAAGGATGTTTAGCAGCACTTTGCTGTTGCTGT
CTCTTGGATGCTTGCTTCTGATAAAGATGGATGGATGGATGGATGATCTTAAGCACTCAACTTATTATTCTAATTTCATTGCATTGTACTATCACCATCATCTAATCTTC
CTATACTACTAATCCTATGTTTTTTTTTTAATGAAAAATCTTTTTATCACATTGATATTTCGAGAAATGAATACAAAATAGTATTCGTACGGAATTCAAAATACGGATTA
ATAAGTCACGACGATAAATAAAGAAATAATGAATACATAATAATATTTAGTCTCAG
Protein sequenceShow/hide protein sequence
MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPTAQGYPPPPPPPVYAPQYAPTTQQPPPKDKTGCLEGCLAALCCCCLLDACF