CuGenDBv2

Gene ID	CmoCh02G005490
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	60S ribosomal protein L26
Genome location	Cmo_Chr02:3114026..3114466
RNA-Seq Expression	CmoCh02G005490
Synteny	CmoCh02G005490
Gene Ontology terms	GO:0002181 - cytoplasmic translation (biological process) GO:0042273 - ribosomal large subunit biogenesis (biological process) GO:0022625 - cytosolic large ribosomal subunit (cellular component) GO:0003723 - RNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR005756 - Ribosomal protein L26/L24, eukaryotic/archaeal IPR005824 - KOW IPR005825 - Ribosomal protein L24/L26, conserved site IPR008991 - Translation protein SH3-like domain superfamily IPR014722 - Ribosomal protein L2, domain 2 IPR041988 - Ribosomal protein L26/L24, KOW domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004148028.1 60S ribosomal protein L26-1 [Cucumis sativus]

1.2e-68

95.21

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Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERVTREKVNGSTVNVGMNP
        MKYNPRVSSSRRKNRKAHFSAPSSVRR+LMSA LSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKW+IHIER+TREKVNGSTVNVG+ P
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERVTREKVNGSTVNVGMNP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASSDKDKGTKFTAEDIMQSVD
        SKVMITKLKLDKDRKSLLDRKAKGRAS+DKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASSDKDKGTKFTAEDIMQSVD

XP_008457837.1 PREDICTED: 60S ribosomal protein L26-1-like [Cucumis melo]

1.4e-69

95.89

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Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERVTREKVNGSTVNVGMNP
        MKYNPRVSSSRRKNRKAHFSAPSSVRR+LMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKW+IHIER+TREKVNGSTVNVG+ P
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERVTREKVNGSTVNVGMNP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASSDKDKGTKFTAEDIMQSVD
        SKVMITKLKLDKDRKSLLDRKAKGRAS+DKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASSDKDKGTKFTAEDIMQSVD

XP_022149443.1 60S ribosomal protein L26-1-like [Momordica charantia]

6.3e-70

95.89

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Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERVTREKVNGSTVNVGMNP
        MKYNPRVSSSRRKNRKAHF+APSSVRR+LMSAPLSGDLRSKYNVRSMP+RKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIER+TREKVNGSTVNVG+NP
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERVTREKVNGSTVNVGMNP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASSDKDKGTKFTAEDIMQSVD
        SKVMITKLKLDKDRKSLLDRKAKGRAS+DKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASSDKDKGTKFTAEDIMQSVD

XP_022931741.1 60S ribosomal protein L26-1-like [Cucurbita moschata]

2.4e-69

95.89

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Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERVTREKVNGSTVNVGMNP
        MKYNPRVSSSRRK+RKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKW+IHIER+TREKVNGSTVNVG+NP
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERVTREKVNGSTVNVGMNP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASSDKDKGTKFTAEDIMQSVD
        SKV+ITKLKLDKDRKSLLDRKAKGRAS+DKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASSDKDKGTKFTAEDIMQSVD

XP_022948229.1 60S ribosomal protein L26-1-like [Cucurbita moschata]

2.0e-71

100

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Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERVTREKVNGSTVNVGMNP
        MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERVTREKVNGSTVNVGMNP
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERVTREKVNGSTVNVGMNP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASSDKDKGTKFTAEDIMQSVD
        SKVMITKLKLDKDRKSLLDRKAKGRASSDKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASSDKDKGTKFTAEDIMQSVD

TrEMBL top hits

e value

%identity

Alignment

A0A1S3C7Q4 60S ribosomal protein L26-1-like

6.8e-70

95.89

Show/hide

Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERVTREKVNGSTVNVGMNP
        MKYNPRVSSSRRKNRKAHFSAPSSVRR+LMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKW+IHIER+TREKVNGSTVNVG+ P
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERVTREKVNGSTVNVGMNP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASSDKDKGTKFTAEDIMQSVD
        SKVMITKLKLDKDRKSLLDRKAKGRAS+DKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASSDKDKGTKFTAEDIMQSVD

A0A5A7TS06 60S ribosomal protein L26-1-like

6.8e-70

95.89

Show/hide

Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERVTREKVNGSTVNVGMNP
        MKYNPRVSSSRRKNRKAHFSAPSSVRR+LMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKW+IHIER+TREKVNGSTVNVG+ P
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERVTREKVNGSTVNVGMNP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASSDKDKGTKFTAEDIMQSVD
        SKVMITKLKLDKDRKSLLDRKAKGRAS+DKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASSDKDKGTKFTAEDIMQSVD

A0A6J1D6T1 60S ribosomal protein L26-1-like

3.0e-70

95.89

Show/hide

Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERVTREKVNGSTVNVGMNP
        MKYNPRVSSSRRKNRKAHF+APSSVRR+LMSAPLSGDLRSKYNVRSMP+RKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIER+TREKVNGSTVNVG+NP
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERVTREKVNGSTVNVGMNP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASSDKDKGTKFTAEDIMQSVD
        SKVMITKLKLDKDRKSLLDRKAKGRAS+DKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASSDKDKGTKFTAEDIMQSVD

A0A6J1G998 60S ribosomal protein L26-1-like

9.5e-72

100

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Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERVTREKVNGSTVNVGMNP
        MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERVTREKVNGSTVNVGMNP
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERVTREKVNGSTVNVGMNP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASSDKDKGTKFTAEDIMQSVD
        SKVMITKLKLDKDRKSLLDRKAKGRASSDKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASSDKDKGTKFTAEDIMQSVD

A0A6J1L4P7 60S ribosomal protein L26-1-like

9.5e-72

100

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Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERVTREKVNGSTVNVGMNP
        MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERVTREKVNGSTVNVGMNP
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERVTREKVNGSTVNVGMNP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASSDKDKGTKFTAEDIMQSVD
        SKVMITKLKLDKDRKSLLDRKAKGRASSDKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASSDKDKGTKFTAEDIMQSVD

SwissProt top hits

e value

%identity

Alignment

P51414 60S ribosomal protein L26-1

1.1e-64

84.25

Show/hide

Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERVTREKVNGSTVNVGMNP
        MKYNPRV+SSRRKNRKAHF+A SS RRV+MS+PLS DLR KYNVRSMPIRKDDEVQ++RGTYKGREGKVVQVYRRKWVIHIER+TREKVNG+TVNVG+ P
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERVTREKVNGSTVNVGMNP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASSDKDKGTKFTAEDIMQSVD
        SKV+ITKL+LDKDRKSLL+RKAKGRA++DK+KGTKFT+ED+MQ+VD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASSDKDKGTKFTAEDIMQSVD

P61257 60S ribosomal protein L26

6.2e-44

68.31

Show/hide

Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGRE-GKVVQVYRRKWVIHIERVTREKVNGSTVNVGMN
        MK+NP V+S R KNRK HF+APS +RR +MS+PLS +LR KYNVRSMPIRKDDEVQV+RG YKG++ GKVVQVYR+K+VI+IERV REK NG+TV+VG++
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGRE-GKVVQVYRRKWVIHIERVTREKVNGSTVNVGMN

Query:  PSKVMITKLKLDKDRKSLLDRKAKGRASSDKDKGTKFTAEDI
        PSKV+IT+LKLDKDRK +L+RKAK R    K+KG K+  E I
Subjt:  PSKVMITKLKLDKDRKSLLDRKAKGRASSDKDKGTKFTAEDI

Q39411 60S ribosomal protein L26

2.3e-59

Show/hide

Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERVTREKVNGSTVNVGMNP
        MKYNPRV+SSRR+NRK HF+A SS RRV MS+PLS DLR KYNVRSMPIRKDDE Q++RGTYKGREGK+ QVYRRK VIHIER+TREKVNG+TVNVG+ P
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERVTREKVNGSTVNVGMNP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASSDKDKGTKFTAEDIMQSV
        +KV+ITKL+LDKDRKSLL+RKAKGRA++DKDKGTKFTA D+MQ+V
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASSDKDKGTKFTAEDIMQSV

Q9FJX2 60S ribosomal protein L26-2

3.1e-64

84.25

Show/hide

Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERVTREKVNGSTVNVGMNP
        MK+NPRVSSSRRKNRKAHF+APSSVRRVLMS+PLS DLR+K+NVRSMPIRKDDEVQV+RGT+KGREGKV+QVYRRKWVIHIER+TREKVNGSTVNVG+N 
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERVTREKVNGSTVNVGMNP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASSDKDKGTKFTAEDIMQSVD
        S VMITKL+LDKDRKSLL+RKA GRA++DK+KGTKF+AED+M++VD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASSDKDKGTKFTAEDIMQSVD

Q9UNX3 60S ribosomal protein L26-like 1

6.2e-44

70.9

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Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGRE-GKVVQVYRRKWVIHIERVTREKVNGSTVNVGMN
        MK+NP V+S R KNRK HF+APS VRR +MS+PLS +LR KYNVRSMPIRKDDEVQV+RG YKG++ GKVVQVYR+K+VI+IERV REK NG+TV+VG++
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGRE-GKVVQVYRRKWVIHIERVTREKVNGSTVNVGMN

Query:  PSKVMITKLKLDKDRKSLLDRKAKGRASSDKDKG
        PSKV+IT+LKLDKDRK +L+RKAK R    K+KG
Subjt:  PSKVMITKLKLDKDRKSLLDRKAKGRASSDKDKG

Arabidopsis top hits

e value

%identity

Alignment

AT3G49910.1 Translation protein SH3-like family protein

7.7e-66

84.25

Show/hide

Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERVTREKVNGSTVNVGMNP
        MKYNPRV+SSRRKNRKAHF+A SS RRV+MS+PLS DLR KYNVRSMPIRKDDEVQ++RGTYKGREGKVVQVYRRKWVIHIER+TREKVNG+TVNVG+ P
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERVTREKVNGSTVNVGMNP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASSDKDKGTKFTAEDIMQSVD
        SKV+ITKL+LDKDRKSLL+RKAKGRA++DK+KGTKFT+ED+MQ+VD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASSDKDKGTKFTAEDIMQSVD

AT5G67510.1 Translation protein SH3-like family protein

2.2e-65

84.25

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Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERVTREKVNGSTVNVGMNP
        MK+NPRVSSSRRKNRKAHF+APSSVRRVLMS+PLS DLR+K+NVRSMPIRKDDEVQV+RGT+KGREGKV+QVYRRKWVIHIER+TREKVNGSTVNVG+N 
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERVTREKVNGSTVNVGMNP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASSDKDKGTKFTAEDIMQSVD
        S VMITKL+LDKDRKSLL+RKA GRA++DK+KGTKF+AED+M++VD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASSDKDKGTKFTAEDIMQSVD

Sequences

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CDS sequence

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ATGAAGTACAATCCCAGGGTCTCAAGCTCCCGCCGCAAGAATCGCAAGGCTCACTTCTCAGCACCGTCGAGTGTACGGCGGGTTCTGATGAGTGCGCCTCTCTCCGGCGA
TTTGCGCTCCAAGTACAATGTTCGCTCGATGCCGATTCGCAAGGACGACGAAGTTCAGGTCTTGAGAGGAACCTACAAAGGCCGTGAAGGAAAGGTCGTTCAGGTCTACC
GTCGCAAGTGGGTCATTCACATCGAACGCGTTACCAGAGAGAAGGTGAACGGCTCCACCGTCAACGTCGGAATGAATCCGTCGAAGGTTATGATCACAAAGCTCAAGTTG
GACAAGGATAGGAAGTCGCTGCTCGATCGTAAGGCTAAGGGCCGTGCTTCTTCTGATAAGGATAAGGGCACTAAATTCACCGCTGAGGATATTATGCAGAGCGTCGACTA
A

mRNA sequence

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Protein sequence

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MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERVTREKVNGSTVNVGMNPSKVMITKLKL
DKDRKSLLDRKAKGRASSDKDKGTKFTAEDIMQSVD

CmoCh02G005490 (gene) of Cucurbita moschata (Rifu) v1 genome