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CmoCh02G005600 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G005600
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionHTH-type transcriptional regulator protein ptxE
Genome locationCmo_Chr02:3192805..3193266
RNA-Seq ExpressionCmoCh02G005600
SyntenyCmoCh02G005600
Gene Ontology termsNA
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605242.1 hypothetical protein SDJN03_02559, partial [Cucurbita argyrosperma subsp. sororia]1.8e-7597.39Show/hide
Query:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAVDDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSAL
        MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPA+FICNSDDMDFNDVVTAVDDDDELQLG LYFALPLEKLNKPLHAEDMAALAVKASSAL
Subjt:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAVDDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSAL

Query:  MKAGGGGSEKCGSRRAVVFSEEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE
        MKAGGGGSEKCGSRR VVF EEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE
Subjt:  MKAGGGGSEKCGSRRAVVFSEEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE

XP_022947655.1 uncharacterized protein LOC111451454 [Cucurbita moschata]1.5e-77100Show/hide
Query:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAVDDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSAL
        MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAVDDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSAL
Subjt:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAVDDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSAL

Query:  MKAGGGGSEKCGSRRAVVFSEEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE
        MKAGGGGSEKCGSRRAVVFSEEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE
Subjt:  MKAGGGGSEKCGSRRAVVFSEEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE

XP_023007426.1 uncharacterized protein LOC111499928 [Cucurbita maxima]2.2e-7395.42Show/hide
Query:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAVDDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSAL
        MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVL KDPASFICNSDDMDFNDVV AVDD+DELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSAL
Subjt:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAVDDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSAL

Query:  MKAGGGGSEKCGSRRAVVFSEEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE
        MKAGGGGSEKCGSRR VVFSEEELRKGPR+GVKKGT +GGSRKFTAKLCAIPE
Subjt:  MKAGGGGSEKCGSRRAVVFSEEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE

XP_023533314.1 uncharacterized protein LOC111795245 isoform X1 [Cucurbita pepo subsp. pepo]1.8e-7598.04Show/hide
Query:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAVDDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSAL
        MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAVDDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSAL
Subjt:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAVDDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSAL

Query:  MKAGGGGSEKCGSRRAVVFSEEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE
        MKAGGGGSEKCGSRR VVF EEELRKGPRKGVKKGT SGGSRKFTAKLCAIPE
Subjt:  MKAGGGGSEKCGSRRAVVFSEEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE

XP_038902080.1 uncharacterized protein LOC120088720 [Benincasa hispida]4.0e-5979.62Show/hide
Query:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAVDDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSAL
        MGIC+SSD+ NV+TAKLIL+DGTL+E+SYPVKVSY+L K PASFICNSD+MDF+DVV AVDDDDELQLGQLYFALPL++LN+PL AE+MAALAVKASSAL
Subjt:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAVDDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSAL

Query:  MKAGGGGSEKCGSRRA----VVFSEEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE
        MKAGGGG+EKCGSRR     V FS+EE RKGPRKG+KK  GSG SRKFTAKL AIPE
Subjt:  MKAGGGGSEKCGSRRA----VVFSEEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE

TrEMBL top hitse value%identityAlignment
A0A6J1D8L2 uncharacterized protein LOC1110179249.3e-5476.43Show/hide
Query:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAVDDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSAL
        MGICISSDS NV+TAKLIL+DGTLLEYSYPVKVSYVL KDPASFICNSD+MDF+DVV+A+DD DELQLGQLYFALPL++LN+PLHAE+MAALAVKAS+AL
Subjt:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAVDDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSAL

Query:  MKAGGGGSEKCGSRRAVV----FSEEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE
        MKAGG   EKCGSRR  +    FS+EE  K  R   KK  GSG  RKFTAKL AIPE
Subjt:  MKAGGGGSEKCGSRRAVV----FSEEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE

A0A6J1EJ90 uncharacterized protein LOC1114349667.9e-5373.25Show/hide
Query:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAVDDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSAL
        MGICISSDS NV+TAKLIL+DGTLLE+SYPVKVS++LHK PA+FICNSDDMDF+D V AV DDD LQLG LYFALPL++LN+PLH E+MAALAVKASSAL
Subjt:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAVDDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSAL

Query:  MKAGGGGSEKCGSRRAVV----FSEEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE
        +KAG GG+EK GSRR  V    FS+EE RK P + ++K  GSGG RKF AKL AIPE
Subjt:  MKAGGGGSEKCGSRRAVV----FSEEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE

A0A6J1G7I2 uncharacterized protein LOC1114514547.1e-78100Show/hide
Query:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAVDDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSAL
        MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAVDDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSAL
Subjt:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAVDDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSAL

Query:  MKAGGGGSEKCGSRRAVVFSEEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE
        MKAGGGGSEKCGSRRAVVFSEEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE
Subjt:  MKAGGGGSEKCGSRRAVVFSEEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE

A0A6J1I7K7 uncharacterized protein LOC1114703505.5e-5473.89Show/hide
Query:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAVDDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSAL
        MGICISSDS NV+TAKLIL+DGTLLE+SYPVKVS++LHK PA+FICNSDDMDF+D V AV DDD LQLG LYFALPL++LN+PLH E+MAALAVKASSAL
Subjt:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAVDDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSAL

Query:  MKAGGGGSEKCGSRRA----VVFSEEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE
        +KAG GG+EK GSRR     V FS+EE RK PR+G++KG+G G  RKF AKL AIPE
Subjt:  MKAGGGGSEKCGSRRA----VVFSEEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE

A0A6J1L0H7 uncharacterized protein LOC1114999281.1e-7395.42Show/hide
Query:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAVDDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSAL
        MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVL KDPASFICNSDDMDFNDVV AVDD+DELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSAL
Subjt:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAVDDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSAL

Query:  MKAGGGGSEKCGSRRAVVFSEEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE
        MKAGGGGSEKCGSRR VVFSEEELRKGPR+GVKKGT +GGSRKFTAKLCAIPE
Subjt:  MKAGGGGSEKCGSRRAVVFSEEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G76600.1 unknown protein3.4e-1639.53Show/hide
Query:  MGICISSDS----PNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPAS----------FICNSDDMDFNDVVTAVDDDDELQLGQLYFALPLEKLNKPLHA
        MG+C+S +      + +TAK++  +G L EY  PV  S VL  +  S          F+CNSD + ++D + A++ D+ LQ  Q+YF LP+ K    L A
Subjt:  MGICISSDS----PNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPAS----------FICNSDDMDFNDVVTAVDDDDELQLGQLYFALPLEKLNKPLHA

Query:  EDMAALAVKASSALMKAGGGGSEKCGSRR
         DMAALAVKAS A+ KA G  + +  S R
Subjt:  EDMAALAVKASSALMKAGGGGSEKCGSRR

AT2G23690.1 unknown protein8.4e-3955.21Show/hide
Query:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAVDDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSAL
        MGIC S +S  V+TAKLIL DG ++E++ PVKV YVL K+P  FICNSDDMDF++VV+A+  D+E QLGQLYFALPL  L+  L AE+MAALAVKASSAL
Subjt:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAVDDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSAL

Query:  MKAGGG-GSEKCGSRR----AVVFSEEEL-----RKGPRKGVKKGTGSGGSRKFTAKLCAIPE
        M++GG  G +KC  RR     V+FS   +         R G ++G G  G RK+ AKL  I E
Subjt:  MKAGGG-GSEKCGSRR----AVVFSEEEL-----RKGPRKGVKKGTGSGGSRKFTAKLCAIPE

AT3G50800.1 unknown protein8.1e-3454.49Show/hide
Query:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAVDDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSAL
        MG C S +S    TAKLIL DGTL E+S PVKV  +L K+P SF+CNSDDMDF+D V AV   ++L+ G+LYF LPL  LN PL A++MAALAVKASSAL
Subjt:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAVDDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSAL

Query:  MKAGGGGSEKCGSRRAVVFSEEELRKGPRKGV-KKGTGSGGS--RKFTAKLCAIPE
         K+GGGG     S       E  +R+  R G   +G G GG   RKFTA+L +I E
Subjt:  MKAGGGGSEKCGSRRAVVFSEEELRKGPRKGV-KKGTGSGGS--RKFTAKLCAIPE

AT4G37240.1 unknown protein5.6e-3553.09Show/hide
Query:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAVDDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSAL
        MGIC SS+S  V+TAKLIL DG ++E++ PVKV YVL K P  FICNSDDMDF+D V A+  D+ELQLGQ+YFALPL  L +PL AE+MAALAVKASSAL
Subjt:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAVDDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSAL

Query:  MKAGGGG-SEKCGS-------RRAVVFSEEELRKGP-RKGVKKGTGSGGSRKFTAKLCAIPE
        M+ GGGG   KC         R  V   ++ +  G  R+ V+ G G G       + C   E
Subjt:  MKAGGGG-SEKCGS-------RRAVVFSEEELRKGP-RKGVKKGTGSGGSRKFTAKLCAIPE

AT5G66580.1 unknown protein4.0e-3353.8Show/hide
Query:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAVDDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSAL
        MG C S +S    +AKLIL DGTL E+S PVKV  +L K+P SF+CNSD+MDF+D V+AV  ++EL+ GQLYF LPL  LN PL AE+MAALAVKASSAL
Subjt:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAVDDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSAL

Query:  MKAGGGGSEKCGSRRAVVFSEEELRKGPRKGVKKGTGSG-----GSRKFTAKLCAIPE
         K+GG G         V  SE+  +K    GVK   G G     G R+FTA L  I E
Subjt:  MKAGGGGSEKCGSRRAVVFSEEELRKGPRKGVKKGTGSG-----GSRKFTAKLCAIPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTATTTGCATTTCCTCCGATTCCCCCAATGTTTCTACGGCCAAACTCATTCTTTCGGACGGAACATTGCTGGAATATTCGTACCCGGTAAAGGTTTCGTATGTACT
ACATAAAGATCCGGCGAGTTTCATTTGCAACTCCGACGATATGGATTTCAACGATGTTGTAACCGCCGTTGACGACGACGACGAGCTTCAACTCGGGCAGCTTTACTTTG
CGCTGCCGTTGGAGAAGCTGAACAAGCCGCTTCACGCGGAGGATATGGCTGCATTGGCTGTGAAGGCTAGCTCGGCGCTGATGAAGGCGGGCGGTGGAGGGAGTGAGAAA
TGTGGGTCACGGCGGGCGGTGGTGTTTTCTGAGGAGGAGCTTAGGAAGGGTCCGAGAAAGGGTGTGAAGAAGGGGACAGGGAGTGGTGGAAGTAGGAAATTCACGGCGAA
ATTGTGTGCAATCCCTGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTATTTGCATTTCCTCCGATTCCCCCAATGTTTCTACGGCCAAACTCATTCTTTCGGACGGAACATTGCTGGAATATTCGTACCCGGTAAAGGTTTCGTATGTACT
ACATAAAGATCCGGCGAGTTTCATTTGCAACTCCGACGATATGGATTTCAACGATGTTGTAACCGCCGTTGACGACGACGACGAGCTTCAACTCGGGCAGCTTTACTTTG
CGCTGCCGTTGGAGAAGCTGAACAAGCCGCTTCACGCGGAGGATATGGCTGCATTGGCTGTGAAGGCTAGCTCGGCGCTGATGAAGGCGGGCGGTGGAGGGAGTGAGAAA
TGTGGGTCACGGCGGGCGGTGGTGTTTTCTGAGGAGGAGCTTAGGAAGGGTCCGAGAAAGGGTGTGAAGAAGGGGACAGGGAGTGGTGGAAGTAGGAAATTCACGGCGAA
ATTGTGTGCAATCCCTGAATGA
Protein sequenceShow/hide protein sequence
MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAVDDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSALMKAGGGGSEK
CGSRRAVVFSEEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE