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CmoCh02G005710 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G005710
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRNase H domain-containing protein
Genome locationCmo_Chr02:3340739..3341431
RNA-Seq ExpressionCmoCh02G005710
SyntenyCmoCh02G005710
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605256.1 hypothetical protein SDJN03_02573, partial [Cucurbita argyrosperma subsp. sororia]2.2e-3191.55Show/hide
Query:  MCYLVECKTCNKTSWKGCGNHLPDLYKRIEKGKHCTCRPWPG-VVVPLEDSADMKTAPPTMANPKSSVTEG
        MCYLVECKTCNKTSWKGCGNHLPDLY RIEKGKHCTCRPWPG VVVPL+DSADMKTAPP+MAN KSSV EG
Subjt:  MCYLVECKTCNKTSWKGCGNHLPDLYKRIEKGKHCTCRPWPG-VVVPLEDSADMKTAPPTMANPKSSVTEG

KAG7035219.1 hypothetical protein SDJN02_02014 [Cucurbita argyrosperma subsp. argyrosperma]6.3e-3190.14Show/hide
Query:  MCYLVECKTCNKTSWKGCGNHLPDLYKRIEKGKHCTCRPWPG-VVVPLEDSADMKTAPPTMANPKSSVTEG
        MCYLVECKTCNKTSWKGCGNHLPDLY RIEKGKHCTCRPWPG VVVPL+DSADMKTAPP+MAN KSSV +G
Subjt:  MCYLVECKTCNKTSWKGCGNHLPDLYKRIEKGKHCTCRPWPG-VVVPLEDSADMKTAPPTMANPKSSVTEG

KAG8641286.1 hypothetical protein MANES_13G132300v8 [Manihot esculenta]4.8e-1550.7Show/hide
Query:  MCYLVECKTCNKTSWKGCGNHLPDLYKRIEKGKHCTCRPWPGVVVPLEDSADMKTAPPTMANPKSSVTEGT
        MC+ V+CK C K SW GCG HL  +Y  I+KG HC CRPWPGV +P E+ A  + AP T+A   S+ + G+
Subjt:  MCYLVECKTCNKTSWKGCGNHLPDLYKRIEKGKHCTCRPWPGVVVPLEDSADMKTAPPTMANPKSSVTEGT

KGN62035.1 hypothetical protein Csa_006238 [Cucumis sativus]1.5e-1661.43Show/hide
Query:  MCYLVECKTCNKTSWKGCGNHLPDLYKRIEKGKHCTCRPWPGVVVPLEDSADMKTAPPTMANPKSSVTEG
        MC LV CK C+K +WKGCG HLP LYK +EKGKHC C PWPGVVVP ED  D  T  P+     SSV+ G
Subjt:  MCYLVECKTCNKTSWKGCGNHLPDLYKRIEKGKHCTCRPWPGVVVPLEDSADMKTAPPTMANPKSSVTEG

KOM45077.1 hypothetical protein LR48_Vigan06g038300 [Vigna angularis]4.8e-1549.45Show/hide
Query:  MCYLVECKTCNKTSWKGCGNHLPDLYKRIEKGKHCTCRPWPGVVVPLEDSADMKTAPPTMANPKSSVTEGTP--LHISQLNSFNLDCGTES
        MCY VEC++C + +W GCGNHL  LY  I++G HCTCR WPGVV+P   S D  T  PT  N  S   +G P  L ++QL  F L   T S
Subjt:  MCYLVECKTCNKTSWKGCGNHLPDLYKRIEKGKHCTCRPWPGVVVPLEDSADMKTAPPTMANPKSSVTEGTP--LHISQLNSFNLDCGTES

TrEMBL top hitse value%identityAlignment
A0A0A0LJK5 Uncharacterized protein7.3e-1761.43Show/hide
Query:  MCYLVECKTCNKTSWKGCGNHLPDLYKRIEKGKHCTCRPWPGVVVPLEDSADMKTAPPTMANPKSSVTEG
        MC LV CK C+K +WKGCG HLP LYK +EKGKHC C PWPGVVVP ED  D  T  P+     SSV+ G
Subjt:  MCYLVECKTCNKTSWKGCGNHLPDLYKRIEKGKHCTCRPWPGVVVPLEDSADMKTAPPTMANPKSSVTEG

A0A0L9UR73 Uncharacterized protein2.3e-1549.45Show/hide
Query:  MCYLVECKTCNKTSWKGCGNHLPDLYKRIEKGKHCTCRPWPGVVVPLEDSADMKTAPPTMANPKSSVTEGTP--LHISQLNSFNLDCGTES
        MCY VEC++C + +W GCGNHL  LY  I++G HCTCR WPGVV+P   S D  T  PT  N  S   +G P  L ++QL  F L   T S
Subjt:  MCYLVECKTCNKTSWKGCGNHLPDLYKRIEKGKHCTCRPWPGVVVPLEDSADMKTAPPTMANPKSSVTEGTP--LHISQLNSFNLDCGTES

A0A2C9USL7 Uncharacterized protein3.1e-1551.43Show/hide
Query:  MCYLVECKTCNKTSWKGCGNHLPDLYKRIEKGKHCTCRPWPGVVVPLEDSADMKTAPPTMANPKSSVTEG
        MC+ V+CK C K SW GCG HL  +Y  I+KG HC CRPWPGV +P E+ A  + AP T+A   S+ + G
Subjt:  MCYLVECKTCNKTSWKGCGNHLPDLYKRIEKGKHCTCRPWPGVVVPLEDSADMKTAPPTMANPKSSVTEG

A0A3N7F5W7 Uncharacterized protein1.2e-1468.63Show/hide
Query:  MCYLVECKTCNKTSWKGCGNHLPDLYKRIEKGKHCTCRPWPGVVVPLEDSA
        MCY V CK CNK SW GCGNHL  +Y  IEKGKHCTC+PWPGVV+  E++A
Subjt:  MCYLVECKTCNKTSWKGCGNHLPDLYKRIEKGKHCTCRPWPGVVVPLEDSA

A0A5A7TSL2 Uncharacterized protein5.2e-1570.59Show/hide
Query:  LVECKTCNKTSWKGCGNHLPDLYKRIEKGKHCTCRPWPGVVVPLEDSADMK
        LV CK C+K +WKGCG HLP LYK +EKGKHC CRPWPGVVVP ED   +K
Subjt:  LVECKTCNKTSWKGCGNHLPDLYKRIEKGKHCTCRPWPGVVVPLEDSADMK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTCCCCATATCTTCACAGCCTTGCAACCCTCTGGACATCATGTGTTATCTCGTGGAGTGCAAGACGTGCAACAAGACCTCCTGGAAGGGCTGTGGCAATCACCTGCCTGA
TCTCTATAAGCGAATTGAGAAGGGAAAGCACTGCACTTGCCGCCCCTGGCCCGGCGTCGTCGTGCCCCTTGAGGATTCTGCTGACATGAAAACCGCACCGCCAACGATGG
CTAACCCGAAATCATCTGTCACTGAAGGTACACCGCTACACATATCTCAACTCAACTCGTTCAATTTAGATTGTGGTACTGAAAGTTGGGGTTCGTTTGTGCAGGTAAGA
CAGTTGATAAGGAAGCTTAGGGAAGCGTGGAGTGGCTAA
mRNA sequenceShow/hide mRNA sequence
CTCCCCATATCTTCACAGCCTTGCAACCCTCTGGACATCATGTGTTATCTCGTGGAGTGCAAGACGTGCAACAAGACCTCCTGGAAGGGCTGTGGCAATCACCTGCCTGA
TCTCTATAAGCGAATTGAGAAGGGAAAGCACTGCACTTGCCGCCCCTGGCCCGGCGTCGTCGTGCCCCTTGAGGATTCTGCTGACATGAAAACCGCACCGCCAACGATGG
CTAACCCGAAATCATCTGTCACTGAAGGTACACCGCTACACATATCTCAACTCAACTCGTTCAATTTAGATTGTGGTACTGAAAGTTGGGGTTCGTTTGTGCAGGTAAGA
CAGTTGATAAGGAAGCTTAGGGAAGCGTGGAGTGGCTAAGTTAGAGAGGTTTGAGTCATTTAAGCAATTTCATATGAATTATTGTTATATAAATAAGGACGGGTTTGTAC
GGGAT
Protein sequenceShow/hide protein sequence
LPISSQPCNPLDIMCYLVECKTCNKTSWKGCGNHLPDLYKRIEKGKHCTCRPWPGVVVPLEDSADMKTAPPTMANPKSSVTEGTPLHISQLNSFNLDCGTESWGSFVQVR
QLIRKLREAWSG