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CmoCh02G005980 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G005980
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr02:3659112..3659468
RNA-Seq ExpressionCmoCh02G005980
SyntenyCmoCh02G005980
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571378.1 hypothetical protein SDJN03_30293, partial [Cucurbita argyrosperma subsp. sororia]8.1e-1153.75Show/hide
Query:  MVSKASKLSCYRLFRLLSLLFLFILLITTTGSLGGRTLLEKTGHSEEDPLDIVRGGGLENANDLVTMDYTPATKNRPIHN
        MV K S +SC    +LL  +FLF LL+T TGS GGR L+E T  +EE+PL     G L   NDLVTM YT A  NRP+HN
Subjt:  MVSKASKLSCYRLFRLLSLLFLFILLITTTGSLGGRTLLEKTGHSEEDPLDIVRGGGLENANDLVTMDYTPATKNRPIHN

KAG6605283.1 hypothetical protein SDJN03_02600, partial [Cucurbita argyrosperma subsp. sororia]5.1e-1360Show/hide
Query:  MVSKASKLSCYRLFRLLSLLFLFILLITTTGSLGGRTLLEKTGHSEEDPLDIVRGGGLENANDLVTMDYTPATKNRPIHN
        MVS AS      L   L+LLFLFILL+T   SLG R LLEKTGH EED L I  GG LENA+  + MDYTP+  NRP+HN
Subjt:  MVSKASKLSCYRLFRLLSLLFLFILLITTTGSLGGRTLLEKTGHSEEDPLDIVRGGGLENANDLVTMDYTPATKNRPIHN

KAG6605284.1 hypothetical protein SDJN03_02601, partial [Cucurbita argyrosperma subsp. sororia]4.4e-1767.9Show/hide
Query:  MVSKASKLSCYRLFRLLSLLFLFILLITTTGSLGGRTLLEKTGHSEEDPL-DIVRGGGLENANDLVTMDYTPATKNRPIHN
        MV KAS LSC RL RLL LLFLFILL+TT GS G  +LLEKT HSEED L  I  GG LENA DL  MDYTPA  + P+HN
Subjt:  MVSKASKLSCYRLFRLLSLLFLFILLITTTGSLGGRTLLEKTGHSEEDPL-DIVRGGGLENANDLVTMDYTPATKNRPIHN

KAG6605285.1 hypothetical protein SDJN03_02602, partial [Cucurbita argyrosperma subsp. sororia]1.3e-3296.25Show/hide
Query:  MVSKASKLSCYRLFRLLSLLFLFILLITTTGSLGGRTLLEKTGHSEEDPLDIVRGGGLENANDLVTMDYTPATKNRPIHN
        MV KASKLS YRL RLLSLLFLFILLITTTGSLGGRTLLEKTGHSEEDPLDIVRGGGLENANDLVTMDYTPATKNRPIHN
Subjt:  MVSKASKLSCYRLFRLLSLLFLFILLITTTGSLGGRTLLEKTGHSEEDPLDIVRGGGLENANDLVTMDYTPATKNRPIHN

KGN62099.1 hypothetical protein Csa_006414 [Cucumis sativus]5.8e-0950Show/hide
Query:  MVSKASKLSCYRLFRLLSLLFLFILLITTTGSLGGRTLLEKTGHSEEDPLDIVRGGGLENANDLVTMDYTPATKNRPIHN
        ++ K    SC  L +LL+ +FLF LLITTTGS   R+L+E    +++DP      G +   NDLVTMDYTPA KN PIHN
Subjt:  MVSKASKLSCYRLFRLLSLLFLFILLITTTGSLGGRTLLEKTGHSEEDPLDIVRGGGLENANDLVTMDYTPATKNRPIHN

TrEMBL top hitse value%identityAlignment
A0A0A0LM46 Uncharacterized protein2.8e-0950Show/hide
Query:  MVSKASKLSCYRLFRLLSLLFLFILLITTTGSLGGRTLLEKTGHSEEDPLDIVRGGGLENANDLVTMDYTPATKNRPIHN
        ++ K    SC  L +LL+ +FLF LLITTTGS   R+L+E    +++DP      G +   NDLVTMDYTPA KN PIHN
Subjt:  MVSKASKLSCYRLFRLLSLLFLFILLITTTGSLGGRTLLEKTGHSEEDPLDIVRGGGLENANDLVTMDYTPATKNRPIHN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTCGAAGGCATCGAAACTTTCATGCTATCGCCTCTTTCGGCTGCTGTCCCTCCTCTTTCTTTTCATTCTCCTCATCACAACAACAGGCTCTTTGGGTGGACGGAC
TTTGCTTGAAAAGACGGGGCATAGCGAGGAGGATCCGCTCGACATAGTCCGTGGGGGAGGATTGGAAAACGCCAATGACTTGGTGACGATGGATTATACTCCAGCCACCA
AAAACCGTCCAATCCATAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTTCGAAGGCATCGAAACTTTCATGCTATCGCCTCTTTCGGCTGCTGTCCCTCCTCTTTCTTTTCATTCTCCTCATCACAACAACAGGCTCTTTGGGTGGACGGAC
TTTGCTTGAAAAGACGGGGCATAGCGAGGAGGATCCGCTCGACATAGTCCGTGGGGGAGGATTGGAAAACGCCAATGACTTGGTGACGATGGATTATACTCCAGCCACCA
AAAACCGTCCAATCCATAATTAG
Protein sequenceShow/hide protein sequence
MVSKASKLSCYRLFRLLSLLFLFILLITTTGSLGGRTLLEKTGHSEEDPLDIVRGGGLENANDLVTMDYTPATKNRPIHN