; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh02G006210 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G006210
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationCmo_Chr02:3856116..3856706
RNA-Seq ExpressionCmoCh02G006210
SyntenyCmoCh02G006210
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR044602 - RING-H2 finger protein ATL10/ATL75-79


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605310.1 RING-H2 finger protein ATL78, partial [Cucurbita argyrosperma subsp. sororia]3.8e-10294.9Show/hide
Query:  MSISRKLFTAAAPSALHNPLQSISGGGSGPDTSFDTNVVMVLSVLLCALICSLGLNSIIRCAFKCSRIVVSHDHRPLPTTTAPPTGVHKKAIKSFTVVQF
        MSISRKLFTAAAPSALHNPLQSISGGG GPDTSFDTNVVMVLSVLLCALICSLGLNSIIRCAFKCSRIVVSHDHRP  TTT PPTGVHKKAIKSFTVVQF
Subjt:  MSISRKLFTAAAPSALHNPLQSISGGGSGPDTSFDTNVVMVLSVLLCALICSLGLNSIIRCAFKCSRIVVSHDHRPLPTTTAPPTGVHKKAIKSFTVVQF

Query:  SPELNFPGMDSECIICLSDFAAGDKLRLLPKCNHGFHVRCIDKWLTSHSSCPKCRQCLVQTCQKIAGVGSSTSTSG----QPPPPILNLTPVDHEG
        SPELNFPGMDSECIICLSDFAAGDKLRLLPKCNHGFHVRCIDKWLTSHSSCPKCRQCLVQTC+KIAGVGSSTSTSG    QPPPP+LNLTPVDHEG
Subjt:  SPELNFPGMDSECIICLSDFAAGDKLRLLPKCNHGFHVRCIDKWLTSHSSCPKCRQCLVQTCQKIAGVGSSTSTSG----QPPPPILNLTPVDHEG

KAG7035265.1 RING-H2 finger protein ATL78, partial [Cucurbita argyrosperma subsp. argyrosperma]8.1e-10595.5Show/hide
Query:  MSISRKLFTAAAPSALHNPLQSISGGGSGPDTSFDTNVVMVLSVLLCALICSLGLNSIIRCAFKCSRIVVSHDHRPLPTTTAPPTGVHKKAIKSFTVVQF
        MSISRKLFTAAAPSALHNPLQSISGGG GPDTSFDTNVVMVLSVLLCALICSLGLNSIIRCAFKCSRIVVSHDHRP  TTT PPTGVHKKAIKSFTVVQF
Subjt:  MSISRKLFTAAAPSALHNPLQSISGGGSGPDTSFDTNVVMVLSVLLCALICSLGLNSIIRCAFKCSRIVVSHDHRPLPTTTAPPTGVHKKAIKSFTVVQF

Query:  SPELNFPGMDSECIICLSDFAAGDKLRLLPKCNHGFHVRCIDKWLTSHSSCPKCRQCLVQTCQKIAGVGSSTSTSG----QPPPPILNLTPVDHEGPVRI
        SPELNFPGMDSECIICLSDFAAGDKLRLLPKCNHGFHVRCIDKWLTSHSSCPKCRQCLVQTCQKIAGVGSSTSTSG    QPPPP+LNLTPVDHEGPVRI
Subjt:  SPELNFPGMDSECIICLSDFAAGDKLRLLPKCNHGFHVRCIDKWLTSHSSCPKCRQCLVQTCQKIAGVGSSTSTSG----QPPPPILNLTPVDHEGPVRI

XP_022947654.1 RING-H2 finger protein ATL78-like [Cucurbita moschata]2.4e-109100Show/hide
Query:  MSISRKLFTAAAPSALHNPLQSISGGGSGPDTSFDTNVVMVLSVLLCALICSLGLNSIIRCAFKCSRIVVSHDHRPLPTTTAPPTGVHKKAIKSFTVVQF
        MSISRKLFTAAAPSALHNPLQSISGGGSGPDTSFDTNVVMVLSVLLCALICSLGLNSIIRCAFKCSRIVVSHDHRPLPTTTAPPTGVHKKAIKSFTVVQF
Subjt:  MSISRKLFTAAAPSALHNPLQSISGGGSGPDTSFDTNVVMVLSVLLCALICSLGLNSIIRCAFKCSRIVVSHDHRPLPTTTAPPTGVHKKAIKSFTVVQF

Query:  SPELNFPGMDSECIICLSDFAAGDKLRLLPKCNHGFHVRCIDKWLTSHSSCPKCRQCLVQTCQKIAGVGSSTSTSGQPPPPILNLTPVDHEGPVRI
        SPELNFPGMDSECIICLSDFAAGDKLRLLPKCNHGFHVRCIDKWLTSHSSCPKCRQCLVQTCQKIAGVGSSTSTSGQPPPPILNLTPVDHEGPVRI
Subjt:  SPELNFPGMDSECIICLSDFAAGDKLRLLPKCNHGFHVRCIDKWLTSHSSCPKCRQCLVQTCQKIAGVGSSTSTSGQPPPPILNLTPVDHEGPVRI

XP_023007244.1 RING-H2 finger protein ATL78-like [Cucurbita maxima]2.5e-9892.42Show/hide
Query:  SRKLFTAAAPSALHNPLQSISGGGSGPDTSFDTNVVMVLSVLLCALICSLGLNSIIRCAFKCSRIVVSHDHRPLPTTTAPPTGVHKKAIKSFTVVQFSPE
        SRKLFTAAAPSALHNPLQSISGG  GPDTSFDTNVVMVLSVLLCALICSLGLNSIIRCAFKCSRIVVSHDHRP   TTA PTGVHKKAIKSFTVVQFSPE
Subjt:  SRKLFTAAAPSALHNPLQSISGGGSGPDTSFDTNVVMVLSVLLCALICSLGLNSIIRCAFKCSRIVVSHDHRPLPTTTAPPTGVHKKAIKSFTVVQFSPE

Query:  LNFPGMDSECIICLSDFAAGDKLRLLPKCNHGFHVRCIDKWLTSHSSCPKCRQCLVQTCQKIAGVGSSTSTS------GQPPPPILNLTPVDHEGPVR
        LNFPGMDSECIICLSDFAAGDKLRLLPKCNHGFHVRCIDKWLTSHSSCPKCRQCLVQTCQKIAGVG+STSTS       QPPPP+LNLTPVDHEGPVR
Subjt:  LNFPGMDSECIICLSDFAAGDKLRLLPKCNHGFHVRCIDKWLTSHSSCPKCRQCLVQTCQKIAGVGSSTSTS------GQPPPPILNLTPVDHEGPVR

XP_023532075.1 RING-H2 finger protein ATL78-like [Cucurbita pepo subsp. pepo]4.9e-10295.85Show/hide
Query:  SRKLFTAAAPSALHNPLQSISGGGSGPDTSFDTNVVMVLSVLLCALICSLGLNSIIRCAFKCSRIVVSHDHRPLPTTTAPPTGVHKKAIKSFTVVQFSPE
        SRKLFTAAAPSALHNPLQSIS GG GPDTSFDTNVVMVLSVLLCALICSLGLNSIIRCAFKCSRIVVSHDHRP  TTTA PTGVHKKAIKSFTVVQFSPE
Subjt:  SRKLFTAAAPSALHNPLQSISGGGSGPDTSFDTNVVMVLSVLLCALICSLGLNSIIRCAFKCSRIVVSHDHRPLPTTTAPPTGVHKKAIKSFTVVQFSPE

Query:  LNFPGMDSECIICLSDFAAGDKLRLLPKCNHGFHVRCIDKWLTSHSSCPKCRQCLVQTCQKIAGVGSSTSTSGQPPPPILNLTPVDHEGPVRI
        LNFPGMDSECIICLSDFAAGDKLRLLPKCNHGFHVRCIDKWLTSHSSCPKCRQCLVQTCQKIA VGSSTSTSGQPPPP+LNLTPVDHE PVRI
Subjt:  LNFPGMDSECIICLSDFAAGDKLRLLPKCNHGFHVRCIDKWLTSHSSCPKCRQCLVQTCQKIAGVGSSTSTSGQPPPPILNLTPVDHEGPVRI

TrEMBL top hitse value%identityAlignment
A0A1S3CDJ3 RING-type E3 ubiquitin transferase1.3e-7168.93Show/hide
Query:  SISRKLFTAAAPSALHNPLQSISGGGSGPDTSFDTNVVMVLSVLLCALICSLGLNSIIRCAFKCSRIVVSHDHRPLPTTTAPPTGVHKKAIKSFTVVQFS
        S+ +  FTAAAPSA+H+  +  SGG S   T+FDTNVVMVLSVLLCALICSL LNS+IRCA KCSR +VS+DHR  P  T+  TGVHKKAIKSFTVVQFS
Subjt:  SISRKLFTAAAPSALHNPLQSISGGGSGPDTSFDTNVVMVLSVLLCALICSLGLNSIIRCAFKCSRIVVSHDHRPLPTTTAPPTGVHKKAIKSFTVVQFS

Query:  PELNFPGMDSECIICLSDFAAGDKLRLLPKCNHGFHVRCIDKWLTSHSSCPKCRQCLVQTCQKIAGV---GSSTSTSGQ-------PPPP--ILNLTPVD
        P+LN PG+DSEC+ICLS+F  GDKLRLLPKCNHGFHV+CIDKWL+SHSSCPKCRQCLVQTC+KIAGV    S++S+SG        PPPP  ++NL P++
Subjt:  PELNFPGMDSECIICLSDFAAGDKLRLLPKCNHGFHVRCIDKWLTSHSSCPKCRQCLVQTCQKIAGV---GSSTSTSGQ-------PPPP--ILNLTPVD

Query:  HEGPVR
         E PVR
Subjt:  HEGPVR

A0A5A7TCX2 RING-type E3 ubiquitin transferase1.3e-7168.93Show/hide
Query:  SISRKLFTAAAPSALHNPLQSISGGGSGPDTSFDTNVVMVLSVLLCALICSLGLNSIIRCAFKCSRIVVSHDHRPLPTTTAPPTGVHKKAIKSFTVVQFS
        S+ +  FTAAAPSA+H+  +  SGG S   T+FDTNVVMVLSVLLCALICSL LNS+IRCA KCSR +VS+DHR  P  T+  TGVHKKAIKSFTVVQFS
Subjt:  SISRKLFTAAAPSALHNPLQSISGGGSGPDTSFDTNVVMVLSVLLCALICSLGLNSIIRCAFKCSRIVVSHDHRPLPTTTAPPTGVHKKAIKSFTVVQFS

Query:  PELNFPGMDSECIICLSDFAAGDKLRLLPKCNHGFHVRCIDKWLTSHSSCPKCRQCLVQTCQKIAGV---GSSTSTSGQ-------PPPP--ILNLTPVD
        P+LN PG+DSEC+ICLS+F  GDKLRLLPKCNHGFHV+CIDKWL+SHSSCPKCRQCLVQTC+KIAGV    S++S+SG        PPPP  ++NL P++
Subjt:  PELNFPGMDSECIICLSDFAAGDKLRLLPKCNHGFHVRCIDKWLTSHSSCPKCRQCLVQTCQKIAGV---GSSTSTSGQ-------PPPP--ILNLTPVD

Query:  HEGPVR
         E PVR
Subjt:  HEGPVR

A0A6J1EJK6 RING-type E3 ubiquitin transferase1.7e-6871.28Show/hide
Query:  SISRKLFTAAAPSA-LHNPLQSISGGGSGPDTSFDTNVVMVLSVLLCALICSLGLNSIIRCAFKCSRIVVSHDHRPLPTTTAPPTGVHKKAIKSFTVVQF
        S+    FTA APS+ LH PL+S          +FDTNVVMVLSVLLCALICSLGLNSIIRCA KCSR VVS D  P  +TTA P GVHKKAIKSFT+VQF
Subjt:  SISRKLFTAAAPSA-LHNPLQSISGGGSGPDTSFDTNVVMVLSVLLCALICSLGLNSIIRCAFKCSRIVVSHDHRPLPTTTAPPTGVHKKAIKSFTVVQF

Query:  SPELNFPGMDSECIICLSDFAAGDKLRLLPKCNHGFHVRCIDKWLTSHSSCPKCRQCLVQTCQKIAGVGSSTSTSGQPPPPILNLTPVDHEGPVR
        S +LN PG+DSEC+ICLSDF  G+KLRLLPKCNHGFHV+CIDKWL+SHSSCPKCRQCLVQT QKIAGVG  TS    PPPP +NL P+D E  VR
Subjt:  SPELNFPGMDSECIICLSDFAAGDKLRLLPKCNHGFHVRCIDKWLTSHSSCPKCRQCLVQTCQKIAGVGSSTSTSGQPPPPILNLTPVDHEGPVR

A0A6J1G7G9 RING-type E3 ubiquitin transferase1.2e-109100Show/hide
Query:  MSISRKLFTAAAPSALHNPLQSISGGGSGPDTSFDTNVVMVLSVLLCALICSLGLNSIIRCAFKCSRIVVSHDHRPLPTTTAPPTGVHKKAIKSFTVVQF
        MSISRKLFTAAAPSALHNPLQSISGGGSGPDTSFDTNVVMVLSVLLCALICSLGLNSIIRCAFKCSRIVVSHDHRPLPTTTAPPTGVHKKAIKSFTVVQF
Subjt:  MSISRKLFTAAAPSALHNPLQSISGGGSGPDTSFDTNVVMVLSVLLCALICSLGLNSIIRCAFKCSRIVVSHDHRPLPTTTAPPTGVHKKAIKSFTVVQF

Query:  SPELNFPGMDSECIICLSDFAAGDKLRLLPKCNHGFHVRCIDKWLTSHSSCPKCRQCLVQTCQKIAGVGSSTSTSGQPPPPILNLTPVDHEGPVRI
        SPELNFPGMDSECIICLSDFAAGDKLRLLPKCNHGFHVRCIDKWLTSHSSCPKCRQCLVQTCQKIAGVGSSTSTSGQPPPPILNLTPVDHEGPVRI
Subjt:  SPELNFPGMDSECIICLSDFAAGDKLRLLPKCNHGFHVRCIDKWLTSHSSCPKCRQCLVQTCQKIAGVGSSTSTSGQPPPPILNLTPVDHEGPVRI

A0A6J1L4E9 RING-type E3 ubiquitin transferase1.2e-9892.42Show/hide
Query:  SRKLFTAAAPSALHNPLQSISGGGSGPDTSFDTNVVMVLSVLLCALICSLGLNSIIRCAFKCSRIVVSHDHRPLPTTTAPPTGVHKKAIKSFTVVQFSPE
        SRKLFTAAAPSALHNPLQSISGG  GPDTSFDTNVVMVLSVLLCALICSLGLNSIIRCAFKCSRIVVSHDHRP   TTA PTGVHKKAIKSFTVVQFSPE
Subjt:  SRKLFTAAAPSALHNPLQSISGGGSGPDTSFDTNVVMVLSVLLCALICSLGLNSIIRCAFKCSRIVVSHDHRPLPTTTAPPTGVHKKAIKSFTVVQFSPE

Query:  LNFPGMDSECIICLSDFAAGDKLRLLPKCNHGFHVRCIDKWLTSHSSCPKCRQCLVQTCQKIAGVGSSTSTS------GQPPPPILNLTPVDHEGPVR
        LNFPGMDSECIICLSDFAAGDKLRLLPKCNHGFHVRCIDKWLTSHSSCPKCRQCLVQTCQKIAGVG+STSTS       QPPPP+LNLTPVDHEGPVR
Subjt:  LNFPGMDSECIICLSDFAAGDKLRLLPKCNHGFHVRCIDKWLTSHSSCPKCRQCLVQTCQKIAGVGSSTSTS------GQPPPPILNLTPVDHEGPVR

SwissProt top hitse value%identityAlignment
P0C034 RING-H2 finger protein ATL104.9e-4450.54Show/hide
Query:  AAAPSALHNPLQSISGGGSGPDTSFDTNVVMVLSVLLCALICSLGLNSIIRCAFKCS-RIVVSHDHRPLPTTTAPPT-GVHKKAIKSFTVVQFSPELNFP
        A APS L     ++SG           NV+M+LS+L+C +IC LGL+ IIRCA + S R ++S     L +T      G+ KKA++ F VV +SPE+N P
Subjt:  AAAPSALHNPLQSISGGGSGPDTSFDTNVVMVLSVLLCALICSLGLNSIIRCAFKCS-RIVVSHDHRPLPTTTAPPT-GVHKKAIKSFTVVQFSPELNFP

Query:  GMDSECIICLSDFAAGDKLRLLPKCNHGFHVRCIDKWLTSHSSCPKCRQCLVQTCQKIAGVGSSTSTSGQPPPPILNLTPVDHE
        G+D EC+ICLSDF +G++LRLLPKCNHGFHVRCIDKWL  H +CPKCR CLV+TCQKI G  S   +    P  I+ +T V  E
Subjt:  GMDSECIICLSDFAAGDKLRLLPKCNHGFHVRCIDKWLTSHSSCPKCRQCLVQTCQKIAGVGSSTSTSGQPPPPILNLTPVDHE

Q6NML0 E3 ubiquitin-protein ligase ATL762.4e-4349.21Show/hide
Query:  AAAPSALHNPLQSISGGGSGPDTSFDTNVVMVLSVLLCALICSLGLNSIIRCAF-KCSRIVVSHDHRPLPT-TTAPPTGVHKKAIKSFTVVQFSPELNFP
        A APS L     ++ G           NV+M+LSVL+C +IC LGL+ IIRCAF + SR ++S     L T  ++   G+ KKA++ F VV +S E+N P
Subjt:  AAAPSALHNPLQSISGGGSGPDTSFDTNVVMVLSVLLCALICSLGLNSIIRCAF-KCSRIVVSHDHRPLPT-TTAPPTGVHKKAIKSFTVVQFSPELNFP

Query:  GMDSECIICLSDFAAGDKLRLLPKCNHGFHVRCIDKWLTSHSSCPKCRQCLVQTCQKIAGVGSSTSTSGQPPPP--ILNLTPVDHEGPV
        G+  EC+ICLSDF +G++LRLLPKCNHGFHVRCIDKWL  H +CPKCR CLV+TCQKI G  S   +    P    I+ + P++ EG V
Subjt:  GMDSECIICLSDFAAGDKLRLLPKCNHGFHVRCIDKWLTSHSSCPKCRQCLVQTCQKIAGVGSSTSTSGQPPPP--ILNLTPVDHEGPV

Q6NQG7 RING-H2 finger protein ATL781.4e-5157.89Show/hide
Query:  DTSFDTNVVMVLSVLLCALICSLGLNSIIRCAFKCSRIVVSH---DHRPLPTTTAPPTGVHKKAIKSFTVVQFSPELNFPGMDSECIICLSDFAAGDKLR
        D +FD NVVMVLSVLLCAL+CSLGLNSIIRCA +CS +V S    D+ P+  T    TGV +KA+KSF  V +S ELN PG+D+EC ICLS+F A ++++
Subjt:  DTSFDTNVVMVLSVLLCALICSLGLNSIIRCAFKCSRIVVSH---DHRPLPTTTAPPTGVHKKAIKSFTVVQFSPELNFPGMDSECIICLSDFAAGDKLR

Query:  LLPKCNHGFHVRCIDKWLTSHSSCPKCRQCLVQTCQKIAGVGSSTSTSGQPPPP---ILNLTPVDHEGPVR
        LLP C+HGFHVRCIDKWL+SHSSCP CR CL+QTC+KIA    ++S +   PP    IL + P++ E  +R
Subjt:  LLPKCNHGFHVRCIDKWLTSHSSCPKCRQCLVQTCQKIAGVGSSTSTSGQPPPP---ILNLTPVDHEGPVR

Q94BY6 RING-H2 finger protein ATL751.4e-4348.17Show/hide
Query:  AAAPSALHNPLQSISGGGSGPDTSFDTNVVMVLSVLLCALICSLGLNSIIRCAF-KCSRIVVSHDHRPLPTTTAPPT-GVHKKAIKSFTVVQFSPELNFP
        A APS L     ++SG           NV+M+LSVL+C +IC LGL+ IIRCAF + S  ++S     L T       G++KKA++ F VV +SPE+N P
Subjt:  AAAPSALHNPLQSISGGGSGPDTSFDTNVVMVLSVLLCALICSLGLNSIIRCAF-KCSRIVVSHDHRPLPTTTAPPT-GVHKKAIKSFTVVQFSPELNFP

Query:  GMDSECIICLSDFAAGDKLRLLPKCNHGFHVRCIDKWLTSHSSCPKCRQCLVQTCQKIAGVGSSTSTSGQPPPP--ILNLTPVDHEGPVRI
        G+  EC+ICLSDF +G+++R+LPKC+HGFHVRCIDKWL  H +CPKCR CLV+TCQKI G  S        P    I+ + P++ EG V I
Subjt:  GMDSECIICLSDFAAGDKLRLLPKCNHGFHVRCIDKWLTSHSSCPKCRQCLVQTCQKIAGVGSSTSTSGQPPPP--ILNLTPVDHEGPVRI

Q9LS99 RING-H2 finger protein ATL772.4e-4360.61Show/hide
Query:  NVVMVLSVLLCALICSLGLNSIIRCAFKCSRIVVSHDHRPLPTT---TAPPTGVHKKAIKSFTVVQFSPELNFPGMDSECIICLSDFAAGDKLRLLPKCN
        NV+M+LS+LLC +ICSLGL+ IIRCAF  SR  +  D   +P+T   ++   G+ KKA+K   VV +SPE+N PG+  EC+ICLSDF AG++LR+LPKCN
Subjt:  NVVMVLSVLLCALICSLGLNSIIRCAFKCSRIVVSHDHRPLPTT---TAPPTGVHKKAIKSFTVVQFSPELNFPGMDSECIICLSDFAAGDKLRLLPKCN

Query:  HGFHVRCIDKWLTSHSSCPKCRQCLVQTCQKI
        HGFH+RCIDKWLT H +CPKCR CLV TCQK+
Subjt:  HGFHVRCIDKWLTSHSSCPKCRQCLVQTCQKI

Arabidopsis top hitse value%identityAlignment
AT1G49200.1 RING/U-box superfamily protein1.0e-4448.17Show/hide
Query:  AAAPSALHNPLQSISGGGSGPDTSFDTNVVMVLSVLLCALICSLGLNSIIRCAF-KCSRIVVSHDHRPLPTTTAPPT-GVHKKAIKSFTVVQFSPELNFP
        A APS L     ++SG           NV+M+LSVL+C +IC LGL+ IIRCAF + S  ++S     L T       G++KKA++ F VV +SPE+N P
Subjt:  AAAPSALHNPLQSISGGGSGPDTSFDTNVVMVLSVLLCALICSLGLNSIIRCAF-KCSRIVVSHDHRPLPTTTAPPT-GVHKKAIKSFTVVQFSPELNFP

Query:  GMDSECIICLSDFAAGDKLRLLPKCNHGFHVRCIDKWLTSHSSCPKCRQCLVQTCQKIAGVGSSTSTSGQPPPP--ILNLTPVDHEGPVRI
        G+  EC+ICLSDF +G+++R+LPKC+HGFHVRCIDKWL  H +CPKCR CLV+TCQKI G  S        P    I+ + P++ EG V I
Subjt:  GMDSECIICLSDFAAGDKLRLLPKCNHGFHVRCIDKWLTSHSSCPKCRQCLVQTCQKIAGVGSSTSTSGQPPPP--ILNLTPVDHEGPVRI

AT1G49210.1 RING/U-box superfamily protein1.7e-4449.21Show/hide
Query:  AAAPSALHNPLQSISGGGSGPDTSFDTNVVMVLSVLLCALICSLGLNSIIRCAF-KCSRIVVSHDHRPLPT-TTAPPTGVHKKAIKSFTVVQFSPELNFP
        A APS L     ++ G           NV+M+LSVL+C +IC LGL+ IIRCAF + SR ++S     L T  ++   G+ KKA++ F VV +S E+N P
Subjt:  AAAPSALHNPLQSISGGGSGPDTSFDTNVVMVLSVLLCALICSLGLNSIIRCAF-KCSRIVVSHDHRPLPT-TTAPPTGVHKKAIKSFTVVQFSPELNFP

Query:  GMDSECIICLSDFAAGDKLRLLPKCNHGFHVRCIDKWLTSHSSCPKCRQCLVQTCQKIAGVGSSTSTSGQPPPP--ILNLTPVDHEGPV
        G+  EC+ICLSDF +G++LRLLPKCNHGFHVRCIDKWL  H +CPKCR CLV+TCQKI G  S   +    P    I+ + P++ EG V
Subjt:  GMDSECIICLSDFAAGDKLRLLPKCNHGFHVRCIDKWLTSHSSCPKCRQCLVQTCQKIAGVGSSTSTSGQPPPP--ILNLTPVDHEGPV

AT1G49220.1 RING/U-box superfamily protein3.4e-4550.54Show/hide
Query:  AAAPSALHNPLQSISGGGSGPDTSFDTNVVMVLSVLLCALICSLGLNSIIRCAFKCS-RIVVSHDHRPLPTTTAPPT-GVHKKAIKSFTVVQFSPELNFP
        A APS L     ++SG           NV+M+LS+L+C +IC LGL+ IIRCA + S R ++S     L +T      G+ KKA++ F VV +SPE+N P
Subjt:  AAAPSALHNPLQSISGGGSGPDTSFDTNVVMVLSVLLCALICSLGLNSIIRCAFKCS-RIVVSHDHRPLPTTTAPPT-GVHKKAIKSFTVVQFSPELNFP

Query:  GMDSECIICLSDFAAGDKLRLLPKCNHGFHVRCIDKWLTSHSSCPKCRQCLVQTCQKIAGVGSSTSTSGQPPPPILNLTPVDHE
        G+D EC+ICLSDF +G++LRLLPKCNHGFHVRCIDKWL  H +CPKCR CLV+TCQKI G  S   +    P  I+ +T V  E
Subjt:  GMDSECIICLSDFAAGDKLRLLPKCNHGFHVRCIDKWLTSHSSCPKCRQCLVQTCQKIAGVGSSTSTSGQPPPPILNLTPVDHE

AT1G49230.1 RING/U-box superfamily protein1.0e-5257.89Show/hide
Query:  DTSFDTNVVMVLSVLLCALICSLGLNSIIRCAFKCSRIVVSH---DHRPLPTTTAPPTGVHKKAIKSFTVVQFSPELNFPGMDSECIICLSDFAAGDKLR
        D +FD NVVMVLSVLLCAL+CSLGLNSIIRCA +CS +V S    D+ P+  T    TGV +KA+KSF  V +S ELN PG+D+EC ICLS+F A ++++
Subjt:  DTSFDTNVVMVLSVLLCALICSLGLNSIIRCAFKCSRIVVSH---DHRPLPTTTAPPTGVHKKAIKSFTVVQFSPELNFPGMDSECIICLSDFAAGDKLR

Query:  LLPKCNHGFHVRCIDKWLTSHSSCPKCRQCLVQTCQKIAGVGSSTSTSGQPPPP---ILNLTPVDHEGPVR
        LLP C+HGFHVRCIDKWL+SHSSCP CR CL+QTC+KIA    ++S +   PP    IL + P++ E  +R
Subjt:  LLPKCNHGFHVRCIDKWLTSHSSCPKCRQCLVQTCQKIAGVGSSTSTSGQPPPP---ILNLTPVDHEGPVR

AT3G18773.1 RING/U-box superfamily protein1.7e-4460.61Show/hide
Query:  NVVMVLSVLLCALICSLGLNSIIRCAFKCSRIVVSHDHRPLPTT---TAPPTGVHKKAIKSFTVVQFSPELNFPGMDSECIICLSDFAAGDKLRLLPKCN
        NV+M+LS+LLC +ICSLGL+ IIRCAF  SR  +  D   +P+T   ++   G+ KKA+K   VV +SPE+N PG+  EC+ICLSDF AG++LR+LPKCN
Subjt:  NVVMVLSVLLCALICSLGLNSIIRCAFKCSRIVVSHDHRPLPTT---TAPPTGVHKKAIKSFTVVQFSPELNFPGMDSECIICLSDFAAGDKLRLLPKCN

Query:  HGFHVRCIDKWLTSHSSCPKCRQCLVQTCQKI
        HGFH+RCIDKWLT H +CPKCR CLV TCQK+
Subjt:  HGFHVRCIDKWLTSHSSCPKCRQCLVQTCQKI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAATTTCAAGAAAGCTCTTCACCGCTGCAGCCCCCTCCGCCCTCCACAACCCACTCCAATCCATCTCTGGTGGCGGTAGCGGTCCCGACACCAGCTTCGACACCAA
TGTCGTCATGGTCCTCTCCGTCCTCCTTTGCGCCTTAATCTGCTCCTTAGGCCTCAACTCCATCATCAGATGCGCTTTTAAATGCTCTCGAATTGTCGTCTCCCATGACC
ACCGTCCTCTCCCGACCACCACCGCTCCCCCGACCGGAGTTCACAAGAAGGCCATCAAGAGCTTTACTGTCGTTCAATTCTCCCCCGAGCTCAACTTCCCCGGGATGGAT
AGTGAGTGCATTATTTGCTTGTCGGACTTTGCTGCCGGCGACAAACTCCGGCTGCTCCCTAAGTGTAACCATGGATTTCATGTTAGGTGTATTGACAAGTGGCTGACTTC
TCACTCCTCTTGCCCTAAATGTCGGCAGTGTTTAGTTCAAACTTGTCAGAAGATCGCGGGCGTTGGCTCCTCCACCTCCACCTCCGGTCAACCGCCGCCTCCGATTTTGA
ACTTAACACCGGTGGATCACGAAGGTCCGGTACGAATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCAATTTCAAGAAAGCTCTTCACCGCTGCAGCCCCCTCCGCCCTCCACAACCCACTCCAATCCATCTCTGGTGGCGGTAGCGGTCCCGACACCAGCTTCGACACCAA
TGTCGTCATGGTCCTCTCCGTCCTCCTTTGCGCCTTAATCTGCTCCTTAGGCCTCAACTCCATCATCAGATGCGCTTTTAAATGCTCTCGAATTGTCGTCTCCCATGACC
ACCGTCCTCTCCCGACCACCACCGCTCCCCCGACCGGAGTTCACAAGAAGGCCATCAAGAGCTTTACTGTCGTTCAATTCTCCCCCGAGCTCAACTTCCCCGGGATGGAT
AGTGAGTGCATTATTTGCTTGTCGGACTTTGCTGCCGGCGACAAACTCCGGCTGCTCCCTAAGTGTAACCATGGATTTCATGTTAGGTGTATTGACAAGTGGCTGACTTC
TCACTCCTCTTGCCCTAAATGTCGGCAGTGTTTAGTTCAAACTTGTCAGAAGATCGCGGGCGTTGGCTCCTCCACCTCCACCTCCGGTCAACCGCCGCCTCCGATTTTGA
ACTTAACACCGGTGGATCACGAAGGTCCGGTACGAATTTAA
Protein sequenceShow/hide protein sequence
MSISRKLFTAAAPSALHNPLQSISGGGSGPDTSFDTNVVMVLSVLLCALICSLGLNSIIRCAFKCSRIVVSHDHRPLPTTTAPPTGVHKKAIKSFTVVQFSPELNFPGMD
SECIICLSDFAAGDKLRLLPKCNHGFHVRCIDKWLTSHSSCPKCRQCLVQTCQKIAGVGSSTSTSGQPPPPILNLTPVDHEGPVRI