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CmoCh02G006300 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G006300
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCoiled-coil domain-containing protein 18, putative isoform 2
Genome locationCmo_Chr02:3917577..3918193
RNA-Seq ExpressionCmoCh02G006300
SyntenyCmoCh02G006300
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605318.1 hypothetical protein SDJN03_02635, partial [Cucurbita argyrosperma subsp. sororia]8.4e-4197.78Show/hide
Query:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKPIEDRDSSMQNCCHEEEVDELPSFYRLPDIVSAPF
        MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECK IEDRDSSMQNCCHEEEVDELPS YRLPDIVSAPF
Subjt:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKPIEDRDSSMQNCCHEEEVDELPSFYRLPDIVSAPF
XP_011649401.1 uncharacterized protein LOC105434623 [Cucumis sativus]6.9e-2775Show/hide
Query:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKPI-EDRDSSMQNCCHEEEVDE-LPSFYRLPDIVSAPF
        M  IDRKSSIENEPRTLKMHQIQFAREAALYV+NT++IEEAM+IFTEGL+ VECK I ED+DS ++N  H+EE+DE L  FY+L DIVSAPF
Subjt:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKPI-EDRDSSMQNCCHEEEVDE-LPSFYRLPDIVSAPF
XP_022947894.1 uncharacterized protein LOC111451648 [Cucurbita moschata]2.0e-42100Show/hide
Query:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKPIEDRDSSMQNCCHEEEVDELPSFYRLPDIVSAPF
        MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKPIEDRDSSMQNCCHEEEVDELPSFYRLPDIVSAPF
Subjt:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKPIEDRDSSMQNCCHEEEVDELPSFYRLPDIVSAPF
XP_023512402.1 uncharacterized protein LOC111777167 [Cucurbita pepo subsp. pepo]4.1e-2773.63Show/hide
Query:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKPIEDRDSS-MQNCCHEEEVDELPSFYRLPDIVSAPF
        M R+DRKSSIE EPRTLKM+QIQFAREAALYV+NT+S+EEA++IFTEGLEAVECK I D D S M+N  HE+E DELP  Y+L DIV+APF
Subjt:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKPIEDRDSS-MQNCCHEEEVDELPSFYRLPDIVSAPF
XP_038902606.1 uncharacterized protein LOC120089256 [Benincasa hispida]2.8e-2876.67Show/hide
Query:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKPIEDRDSSMQNCCHEEEVDELPSFYRLPDIVSAPF
        M  IDRKSSIENEPRTL+MHQIQFAREAALYVINT++IEEAM+IFTEGL+ VECK I+D+DS M N  HEEE DEL S Y+  DIVSAPF
Subjt:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKPIEDRDSSMQNCCHEEEVDELPSFYRLPDIVSAPF
TrEMBL top hitse value%identityAlignment
A0A0A0LQ89 Uncharacterized protein3.4e-2775Show/hide
Query:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKPI-EDRDSSMQNCCHEEEVDE-LPSFYRLPDIVSAPF
        M  IDRKSSIENEPRTLKMHQIQFAREAALYV+NT++IEEAM+IFTEGL+ VECK I ED+DS ++N  H+EE+DE L  FY+L DIVSAPF
Subjt:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKPI-EDRDSSMQNCCHEEEVDE-LPSFYRLPDIVSAPF
A0A1S3CDH2 uncharacterized protein LOC1034996384.4e-2773.91Show/hide
Query:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKPI--EDRDSSMQNCCHEEEVDELPSFYRLPDIVSAPF
        M  IDRKSSIENEPRTLKM+QIQFAREAALYV+NT++IEEAM+IFTEGL+ VECK I  ED+DS M+N  H+EE+DEL  F +L DIVSAPF
Subjt:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKPI--EDRDSSMQNCCHEEEVDELPSFYRLPDIVSAPF
A0A498HZX3 Uncharacterized protein8.6e-1557.61Show/hide
Query:  RIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKPIEDRDSSMQNCCHEEEVDELPSFYRLP----DIVSAPF
        RIDRK SIE EPRTL M QI+FAREAA YV+NT ++EEAMRIFTEGLE V     +  D  M     E E  E   +YR P    +IVSAPF
Subjt:  RIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKPIEDRDSSMQNCCHEEEVDELPSFYRLP----DIVSAPF
A0A6J1DBC1 uncharacterized protein LOC1110189159.1e-2568.48Show/hide
Query:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKPIEDR--DSSMQNCCHEEEVDELPSFYRLPDIVSAPF
        M RIDRKSSIENEPRTLKMHQIQFAREAALY++NT++I+EAMRIFTEGLE VECK   DR  +   +   +EEE+ +L   YR  DIVSAPF
Subjt:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKPIEDR--DSSMQNCCHEEEVDELPSFYRLPDIVSAPF
A0A6J1G887 uncharacterized protein LOC1114516489.7e-43100Show/hide
Query:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKPIEDRDSSMQNCCHEEEVDELPSFYRLPDIVSAPF
        MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKPIEDRDSSMQNCCHEEEVDELPSFYRLPDIVSAPF
Subjt:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKPIEDRDSSMQNCCHEEEVDELPSFYRLPDIVSAPF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G33467.1 unknown protein1.8e-0939.58Show/hide
Query:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKPIEDRDSSMQNCCHEEEVDELPS---FYRLP---DIVSAPF
        M+ ++R+SSIE EP TL + Q++ ARE ALYV+ T ++EEAM IFT+       +  E+R     N   EE+ D+       +  P   DI +APF
Subjt:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKPIEDRDSSMQNCCHEEEVDELPS---FYRLP---DIVSAPF
AT4G33467.2 unknown protein2.4e-0942Show/hide
Query:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFT----EGLEAVECKPIEDRDSSMQNCCHEEEVDELPS---FYRLP---DIVSAPF
        M+ ++R+SSIE EP TL + Q++ ARE ALYV+ T ++EEAM IFT    EGL A      E+R     N   EE+ D+       +  P   DI +APF
Subjt:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFT----EGLEAVECKPIEDRDSSMQNCCHEEEVDELPS---FYRLP---DIVSAPF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAGAATCGACAGAAAGTCATCCATTGAGAACGAGCCAAGAACTCTCAAAATGCACCAAATCCAATTTGCAAGAGAAGCAGCTCTGTATGTGATAAACACAAGCAG
CATAGAAGAAGCAATGAGGATTTTCACAGAGGGATTAGAAGCAGTGGAGTGTAAACCGATTGAAGATAGAGATTCAAGCATGCAAAATTGCTGCCATGAAGAGGAAGTTG
ATGAGTTACCATCTTTTTATCGGCTTCCAGACATTGTTTCGGCCCCTTTTTAG
mRNA sequenceShow/hide mRNA sequence
CTTGCCATAAACAGCCAGAACCCATTTTGGAGAGCTCAATCTGTATTGGTGAAAGAAGATCGAAAGGCAATAATGGAAAGAATCGACAGAAAGTCATCCATTGAGAACGA
GCCAAGAACTCTCAAAATGCACCAAATCCAATTTGCAAGAGAAGCAGCTCTGTATGTGATAAACACAAGCAGCATAGAAGAAGCAATGAGGATTTTCACAGAGGGATTAG
AAGCAGTGGAGTGTAAACCGATTGAAGATAGAGATTCAAGCATGCAAAATTGCTGCCATGAAGAGGAAGTTGATGAGTTACCATCTTTTTATCGGCTTCCAGACATTGTT
TCGGCCCCTTTTTAGGTCACTTTTTTATAAAAAAAATCATAGTTTTTGTAAATAAACATATGATATGTATACTTTTAAGGTCTCAAGGATGGAGTTTTGAGTTTCAACCA
TCCTCATCCAC
Protein sequenceShow/hide protein sequence
MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKPIEDRDSSMQNCCHEEEVDELPSFYRLPDIVSAPF