CuGenDBv2

Gene ID	CmoCh02G006540
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Eukaryotic translation initiation factor 6
Genome location	Cmo_Chr02:4086484..4088957
RNA-Seq Expression	CmoCh02G006540
Synteny	CmoCh02G006540
Gene Ontology terms	GO:0000054 - ribosomal subunit export from nucleus (biological process) GO:0000460 - maturation of 5.8S rRNA (biological process) GO:0000470 - maturation of LSU-rRNA (biological process) GO:0006413 - translational initiation (biological process) GO:0042256 - mature ribosome assembly (biological process) GO:1902626 - assembly of large subunit precursor of preribosome (biological process) GO:0005730 - nucleolus (cellular component) GO:0005829 - cytosol (cellular component) GO:0030687 - preribosome, large subunit precursor (cellular component) GO:0003743 - translation initiation factor activity (molecular function) GO:0043022 - ribosome binding (molecular function) GO:0043023 - ribosomal large subunit binding (molecular function)
InterPro domains	IPR002769 - Translation initiation factor IF6

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022931983.1 eukaryotic translation initiation factor 6-2-like [Cucurbita moschata]

4.5e-129

96.73

Show/hide

Query:  MANRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSSFEAELAGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MA RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYS+FE+EL GVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MANRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSSFEAELAGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIVN
        LSALGNTI+CNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLI N
Subjt:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIVN

Query:  DWTAFCGSDTTATELSVVESVFKLREAQPSSIVDEMRKSLIDSYV
        DWTAFCGSDTTATELSV+ESVFKLRE QPSSIVDEMRKSLIDSYV
Subjt:  DWTAFCGSDTTATELSVVESVFKLREAQPSSIVDEMRKSLIDSYV

XP_022948101.1 eukaryotic translation initiation factor 6-2 [Cucurbita moschata]

2.6e-132

100

Show/hide

Query:  MANRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSSFEAELAGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MANRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSSFEAELAGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MANRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSSFEAELAGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIVN
        LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIVN
Subjt:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIVN

Query:  DWTAFCGSDTTATELSVVESVFKLREAQPSSIVDEMRKSLIDSYV
        DWTAFCGSDTTATELSVVESVFKLREAQPSSIVDEMRKSLIDSYV
Subjt:  DWTAFCGSDTTATELSVVESVFKLREAQPSSIVDEMRKSLIDSYV

XP_022973842.1 eukaryotic translation initiation factor 6-2 [Cucurbita maxima]

1.5e-129

97.14

Show/hide

Query:  MANRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSSFEAELAGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MA RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYS+FE+EL GVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MANRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSSFEAELAGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIVN
        LSALGNTI+CNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLI N
Subjt:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIVN

Query:  DWTAFCGSDTTATELSVVESVFKLREAQPSSIVDEMRKSLIDSYV
        DWTAFCGSDTTATELSV+ESVFKLREAQPSSIVDEMRKSLIDSYV
Subjt:  DWTAFCGSDTTATELSVVESVFKLREAQPSSIVDEMRKSLIDSYV

XP_023533549.1 eukaryotic translation initiation factor 6-2-like [Cucurbita pepo subsp. pepo]

2.8e-131

99.59

Show/hide

Query:  MANRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSSFEAELAGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MANRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSSFEAELA VIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MANRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSSFEAELAGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIVN
        LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIVN
Subjt:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIVN

Query:  DWTAFCGSDTTATELSVVESVFKLREAQPSSIVDEMRKSLIDSYV
        DWTAFCGSDTTATELSVVESVFKLREAQPSSIVDEMRKSLIDSYV
Subjt:  DWTAFCGSDTTATELSVVESVFKLREAQPSSIVDEMRKSLIDSYV

XP_038900322.1 eukaryotic translation initiation factor 6-2 [Benincasa hispida]

5.0e-128

95.92

Show/hide

Query:  MANRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSSFEAELAGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MA RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYS+FE EL GVIPVVK SIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MANRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSSFEAELAGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIVN
        LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTS+EDLDELSTLLQVPLVAGTVNRGSEVIAAGL  N
Subjt:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIVN

Query:  DWTAFCGSDTTATELSVVESVFKLREAQPSSIVDEMRKSLIDSYV
        DWTAFCGSDTTATELSV+ESVFKLREAQPSSIV+EMRKSLIDSYV
Subjt:  DWTAFCGSDTTATELSVVESVFKLREAQPSSIVDEMRKSLIDSYV

TrEMBL top hits

e value

%identity

Alignment

A0A6J1D392 Eukaryotic translation initiation factor 6

9.2e-128

95.92

Show/hide

Query:  MANRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSSFEAELAGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MA RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYS+FE+EL GVIPVVK SIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MANRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSSFEAELAGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIVN
        LSALGNTIACNDHVAL HTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGL  N
Subjt:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIVN

Query:  DWTAFCGSDTTATELSVVESVFKLREAQPSSIVDEMRKSLIDSYV
        DW AFCGSDTTATELSV+ESVFKLREAQPSSIVDEMRKSLIDSYV
Subjt:  DWTAFCGSDTTATELSVVESVFKLREAQPSSIVDEMRKSLIDSYV

A0A6J1F0A8 Eukaryotic translation initiation factor 6

2.2e-129

96.73

Show/hide

Query:  MANRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSSFEAELAGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MA RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYS+FE+EL GVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MANRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSSFEAELAGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIVN
        LSALGNTI+CNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLI N
Subjt:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIVN

Query:  DWTAFCGSDTTATELSVVESVFKLREAQPSSIVDEMRKSLIDSYV
        DWTAFCGSDTTATELSV+ESVFKLRE QPSSIVDEMRKSLIDSYV
Subjt:  DWTAFCGSDTTATELSVVESVFKLREAQPSSIVDEMRKSLIDSYV

A0A6J1G8F7 Eukaryotic translation initiation factor 6

1.2e-132

100

Show/hide

Query:  MANRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSSFEAELAGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MANRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSSFEAELAGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MANRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSSFEAELAGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIVN
        LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIVN
Subjt:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIVN

Query:  DWTAFCGSDTTATELSVVESVFKLREAQPSSIVDEMRKSLIDSYV
        DWTAFCGSDTTATELSVVESVFKLREAQPSSIVDEMRKSLIDSYV
Subjt:  DWTAFCGSDTTATELSVVESVFKLREAQPSSIVDEMRKSLIDSYV

A0A6J1I8L9 Eukaryotic translation initiation factor 6

7.5e-130

97.14

Show/hide

Query:  MANRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSSFEAELAGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MA RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYS+FE+EL GVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MANRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSSFEAELAGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIVN
        LSALGNTI+CNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLI N
Subjt:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIVN

Query:  DWTAFCGSDTTATELSVVESVFKLREAQPSSIVDEMRKSLIDSYV
        DWTAFCGSDTTATELSV+ESVFKLREAQPSSIVDEMRKSLIDSYV
Subjt:  DWTAFCGSDTTATELSVVESVFKLREAQPSSIVDEMRKSLIDSYV

A0A6J1L2F0 Eukaryotic translation initiation factor 6

1.2e-132

100

Show/hide

Query:  MANRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSSFEAELAGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MANRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSSFEAELAGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MANRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSSFEAELAGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIVN
        LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIVN
Subjt:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIVN

Query:  DWTAFCGSDTTATELSVVESVFKLREAQPSSIVDEMRKSLIDSYV
        DWTAFCGSDTTATELSVVESVFKLREAQPSSIVDEMRKSLIDSYV
Subjt:  DWTAFCGSDTTATELSVVESVFKLREAQPSSIVDEMRKSLIDSYV

SwissProt top hits

e value

%identity

Alignment

O55135 Eukaryotic translation initiation factor 6

1.3e-102

76.13

Show/hide

Query:  MANRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSSFEAELAGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MA R  FEN+CE+G F+KLTNAYCLVAIGGSENFYS FE EL+  IPVV  SI G RIIGR+C GN++GLLVP+ TTDQELQH+RNSLPD V ++R++ER
Subjt:  MANRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSSFEAELAGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIVN
        LSALGN   CND+VAL H DLDRETEE++ADVL VEVFRQTVA  VLVGSYC F+N+GGLVHP TSIED DELS+LLQVPLVAGTVNRGSEVIAAG++VN
Subjt:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIVN

Query:  DWTAFCGSDTTATELSVVESVFKLREAQPSSIVDEMRKSLIDS
        DW AFCG DTT+TELSVVESVFKL EA+PS+I   MR SLIDS
Subjt:  DWTAFCGSDTTATELSVVESVFKLREAQPSSIVDEMRKSLIDS

P56537 Eukaryotic translation initiation factor 6

1.3e-102

76.54

Show/hide

Query:  MANRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSSFEAELAGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MA R  FEN+CEIG F+KLTN YCLVAIGGSENFYS FE EL+  IPVV  SI G RIIGR+C GN++GLLVP+ TTDQELQH+RNSLPD V ++R++ER
Subjt:  MANRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSSFEAELAGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIVN
        LSALGN   CND+VAL H DLDRETEE++ADVL VEVFRQTVA  VLVGSYC F+N+GGLVHP TSIED DELS+LLQVPLVAGTVNRGSEVIAAG++VN
Subjt:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIVN

Query:  DWTAFCGSDTTATELSVVESVFKLREAQPSSIVDEMRKSLIDS
        DW AFCG DTT+TELSVVESVFKL EAQPS+I   MR SLIDS
Subjt:  DWTAFCGSDTTATELSVVESVFKLREAQPSSIVDEMRKSLIDS

Q3KRD8 Eukaryotic translation initiation factor 6

3.7e-102

75.72

Show/hide

Query:  MANRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSSFEAELAGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MA R  FEN+CE+G F+KLTN YCLVAIGGSENFYS FE EL+  IPVV  SI G RIIGR+C GN++GLLVP+ TTDQELQH+RNSLPD V ++R++ER
Subjt:  MANRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSSFEAELAGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIVN
        LSALGN   CND+VAL H DLDRETEE++ADVL VEVFRQTVA  VLVGSYC F+N+GGLVHP TSIED DELS+LLQVPLVAGTVNRGSEVIAAG++VN
Subjt:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIVN

Query:  DWTAFCGSDTTATELSVVESVFKLREAQPSSIVDEMRKSLIDS
        DW AFCG DTT+TELSVVESVFKL EA+PS+I   MR SLIDS
Subjt:  DWTAFCGSDTTATELSVVESVFKLREAQPSSIVDEMRKSLIDS

Q9M060 Eukaryotic translation initiation factor 6-2

6.6e-123

87.35

Show/hide

Query:  MANRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSSFEAELAGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MA RL FEN+CE+GVFSKLTNAYCLVAIGGSENFYS+FE+ELA VIP+VKTSI GTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRI ER
Subjt:  MANRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSSFEAELAGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIVN
        LSALGN IACND+VAL HTDLD+ETEE+IADVLGVEVFRQT+AGN+LVGSYC+ +N+GG+VHPHTS+EDL+ELSTLLQVPLVAGTVNRGSEVIAAG+ VN
Subjt:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIVN

Query:  DWTAFCGSDTTATELSVVESVFKLREAQPSSIVDEMRKSLIDSYV
        DWT+FCGSDTTATELSV++S+FKLREAQPSSIVDEMRKSLID+YV
Subjt:  DWTAFCGSDTTATELSVVESVFKLREAQPSSIVDEMRKSLIDSYV

Q9TU47 Eukaryotic translation initiation factor 6

2.0e-103

76.95

Show/hide

Query:  MANRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSSFEAELAGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MA R  FEN+CEIG F+KLTN+YCLVAIGGSENFYS FE ELAG IPVV  SI G RIIGR+C GN++GLLVP+ TTDQELQH+RN LPD V ++R++ER
Subjt:  MANRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSSFEAELAGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIVN
        LSALGN   CND+VAL H DLDRETEE++ADVL VEVFRQTVA  VLVGSYC F+N+GGLVHP TSIED DELS+LLQVPLVAGTVNRGSEVIAAG++VN
Subjt:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIVN

Query:  DWTAFCGSDTTATELSVVESVFKLREAQPSSIVDEMRKSLIDS
        DW AFCG DTT+TELSVVESVFKL EAQPS+I   MR SLIDS
Subjt:  DWTAFCGSDTTATELSVVESVFKLREAQPSSIVDEMRKSLIDS

Arabidopsis top hits

e value

%identity

Alignment

AT2G39820.1 Translation initiation factor IF6

2.9e-94

68.02

Show/hide

Query:  MANRLMFE-NSCEIGVFSKLTNAYCLV-AIGGSENFYSSFEAELAGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQ
        MA RL ++ N+CEIGVFSKLTNAYCLV A   S NF++ +E++L GVIP+V TSI G+  IG LC GNKNGLL+ HT TDQELQHLR+SLPD+VVVQRI+
Subjt:  MANRLMFE-NSCEIGVFSKLTNAYCLV-AIGGSENFYSSFEAELAGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQ

Query:  ERLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLI
        E + ALGN IACND+VAL H  L+++TEE+I+DVLGVEV+RQT+A N LVGSYCS +N GG+VH +T++E++ EL+ L+QVPLVAGTVNRGS+VI+AGL 
Subjt:  ERLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLI

Query:  VNDWTAFCGSDTTATELSVVESVFKLREAQPSSIVDEMRKSLIDSYV
        VNDWTAFCGSDTTA ELSVV ++FKL ++QP  +  EMRKSLID+YV
Subjt:  VNDWTAFCGSDTTATELSVVESVFKLREAQPSSIVDEMRKSLIDSYV

AT3G55620.1 Translation initiation factor IF6

4.7e-124

87.35

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Query:  MANRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSSFEAELAGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MA RL FEN+CE+GVFSKLTNAYCLVAIGGSENFYS+FE+ELA VIP+VKTSI GTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRI ER
Subjt:  MANRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSSFEAELAGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIVN
        LSALGN IACND+VAL HTDLD+ETEE+IADVLGVEVFRQT+AGN+LVGSYC+ +N+GG+VHPHTS+EDL+ELSTLLQVPLVAGTVNRGSEVIAAG+ VN
Subjt:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIVN

Query:  DWTAFCGSDTTATELSVVESVFKLREAQPSSIVDEMRKSLIDSYV
        DWT+FCGSDTTATELSV++S+FKLREAQPSSIVDEMRKSLID+YV
Subjt:  DWTAFCGSDTTATELSVVESVFKLREAQPSSIVDEMRKSLIDSYV

Sequences

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CDS sequence

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mRNA sequence

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ATGGCGAACAGGCTTATGTTTGAGAACTCATGTGAAATTGGGGTTTTCTCCAAACTCACTAATGCGTACTGTTTGGTTGCAATTGGTGGCTCTGAGAACTTCTACAGTTC
CTTTGAAGCTGAATTAGCTGGTGTCATTCCGGTTGTTAAAACATCCATTGACGGCACTCGCATTATTGGCCGTCTATGTGCTGGAAACAAAAATGGGCTCCTTGTACCCC
ATACCACTACTGACCAAGAACTTCAGCACTTGAGAAACAGTCTACCTGACCAAGTTGTTGTTCAACGTATACAAGAGAGACTGTCTGCTCTGGGGAATACAATTGCTTGT
AATGATCATGTTGCTCTCACACATACTGATCTTGACCGGGAAACTGAAGAGCTCATTGCTGATGTTCTTGGAGTAGAGGTGTTTAGGCAGACAGTTGCTGGTAATGTTCT
CGTGGGAAGCTACTGTAGCTTCACGAATAGGGGTGGCTTGGTTCATCCACATACATCTATTGAAGATTTGGACGAACTATCGACTCTTCTTCAGGTCCCGTTGGTTGCTG
GAACTGTGAATCGTGGAAGTGAAGTGATTGCTGCTGGATTGATTGTCAATGACTGGACTGCATTCTGTGGTTCAGACACAACTGCCACCGAATTATCGGTCGTTGAAAGC
GTTTTCAAATTGAGAGAGGCTCAACCAAGCTCCATTGTTGACGAGATGAGGAAGTCGCTAATAGACAGTTATGTGTGAAAGTTACTTATATCTTCTGCTAAACCTGAGAT
GTTGCAGAAGCGCGTAAGTTATTAATTGTTATTACTATTATCTCTTTTCCTTCTGTCATATTTAACAACTTTGTAATTATGAAATTCGACTCTGCATTTATAGCTTGTTT
TATTCGAAATTGGGAAACCATATTTTGGTATTATAAACCTATATGTTTCAGTGTGGTTCCACAAATAACCGTGCAACCTCGAACTTGTTGGAACTGATATATGGTCAGTA
GGGGAACAGGAAAATTATGATTTTTAGTTCAATTGGATTTGGAACAAAGGAATTTGAATATTACGTTTTTTTGTTG

Protein sequence

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MANRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSSFEAELAGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIAC
NDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIVNDWTAFCGSDTTATELSVVES
VFKLREAQPSSIVDEMRKSLIDSYV

CmoCh02G006540 (gene) of Cucurbita moschata (Rifu) v1 genome