; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh02G006550 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G006550
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCCR4-NOT transcription complex subunit 11
Genome locationCmo_Chr02:4126860..4129248
RNA-Seq ExpressionCmoCh02G006550
SyntenyCmoCh02G006550
Gene Ontology termsGO:0006402 - mRNA catabolic process (biological process)
GO:0017148 - negative regulation of translation (biological process)
GO:0031047 - gene silencing by RNA (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0030014 - CCR4-NOT complex (cellular component)
InterPro domainsIPR019312 - CCR4-NOT transcription complex subunit 11


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605345.1 CCR4-NOT transcription complex subunit 11, partial [Cucurbita argyrosperma subsp. sororia]6.2e-16693.56Show/hide
Query:  QFLKKSASDYIVHFDPSLHALPKREQLQQQFCDELQAQSFDCFSKDASVRNVVPDPDVPRGCDANSVEFDQQPGVVPKVGSGEKDVVGLLSNVSPRGSSP
        +FLKKSASDYIVHFDPSLHALPKREQLQQQFCDELQAQSFDCFSKDASVRNVVPDPDVPRG DANSVEFDQQPGVVPKVGSGEKDVVGLLSNVSPRGSSP
Subjt:  QFLKKSASDYIVHFDPSLHALPKREQLQQQFCDELQAQSFDCFSKDASVRNVVPDPDVPRGCDANSVEFDQQPGVVPKVGSGEKDVVGLLSNVSPRGSSP

Query:  EWIRPPPPRLPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTPRKLPELVENNPLVAVEVL
        EWIRPPPPRLPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTPRKLPELVENNPLVAVEVL
Subjt:  EWIRPPPPRLPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTPRKLPELVENNPLVAVEVL

Query:  KKLINSPEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELPSEFIHMYI---ILTCVRYGTFLIVVITPQDKYMQNRLVRLVCVFLQSLIRNNIINVKDLFI
        KKLINSPEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELPSEFIHMYI   I +C             +DKYMQNRLVRLVCVFLQSLIRNNIINVKDLFI
Subjt:  KKLINSPEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELPSEFIHMYI---ILTCVRYGTFLIVVITPQDKYMQNRLVRLVCVFLQSLIRNNIINVKDLFI

Query:  EVQAFCIEFSRIREAAALFRLLKSLE
        EVQAFCIEFSRIREAAALFRLLKSLE
Subjt:  EVQAFCIEFSRIREAAALFRLLKSLE

KAG7035303.1 CCR4-NOT transcription complex subunit 11 [Cucurbita argyrosperma subsp. argyrosperma]2.5e-16793.87Show/hide
Query:  QFLKKSASDYIVHFDPSLHALPKREQLQQQFCDELQAQSFDCFSKDASVRNVVPDPDVPRGCDANSVEFDQQPGVVPKVGSGEKDVVGLLSNVSPRGSSP
        +FLKKSASDYIVHFDPSLHALPKREQLQQQFCDELQAQSFDCFSKDASVRNVVPDPDVPRGCDANSVEFDQQPGVVPKVGSGEKDVVGLLSNVSPRGSSP
Subjt:  QFLKKSASDYIVHFDPSLHALPKREQLQQQFCDELQAQSFDCFSKDASVRNVVPDPDVPRGCDANSVEFDQQPGVVPKVGSGEKDVVGLLSNVSPRGSSP

Query:  EWIRPPPPRLPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTPRKLPELVENNPLVAVEVL
        EWIRPPPPRLPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTPRKLPELVENNPLVAVEVL
Subjt:  EWIRPPPPRLPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTPRKLPELVENNPLVAVEVL

Query:  KKLINSPEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELPSEFIHMYI---ILTCVRYGTFLIVVITPQDKYMQNRLVRLVCVFLQSLIRNNIINVKDLFI
        KKLINSPEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELPSEFIHMYI   I +C             +DKYMQNRLVRLVCVFLQSLIRNNIINVKDLFI
Subjt:  KKLINSPEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELPSEFIHMYI---ILTCVRYGTFLIVVITPQDKYMQNRLVRLVCVFLQSLIRNNIINVKDLFI

Query:  EVQAFCIEFSRIREAAALFRLLKSLE
        EVQAFCIEFSRIREAAALFRLLKSLE
Subjt:  EVQAFCIEFSRIREAAALFRLLKSLE

XP_022947019.1 CCR4-NOT transcription complex subunit 11-like [Cucurbita moschata]2.5e-16793.87Show/hide
Query:  QFLKKSASDYIVHFDPSLHALPKREQLQQQFCDELQAQSFDCFSKDASVRNVVPDPDVPRGCDANSVEFDQQPGVVPKVGSGEKDVVGLLSNVSPRGSSP
        +FLKKSASDYIVHFDPSLHALPKREQLQQQFCDELQAQSFDCFSKDASVRNVVPDPDVPRGCDANSVEFDQQPGVVPKVGSGEKDVVGLLSNVSPRGSSP
Subjt:  QFLKKSASDYIVHFDPSLHALPKREQLQQQFCDELQAQSFDCFSKDASVRNVVPDPDVPRGCDANSVEFDQQPGVVPKVGSGEKDVVGLLSNVSPRGSSP

Query:  EWIRPPPPRLPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTPRKLPELVENNPLVAVEVL
        EWIRPPPPRLPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTPRKLPELVENNPLVAVEVL
Subjt:  EWIRPPPPRLPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTPRKLPELVENNPLVAVEVL

Query:  KKLINSPEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELPSEFIHMYI---ILTCVRYGTFLIVVITPQDKYMQNRLVRLVCVFLQSLIRNNIINVKDLFI
        KKLINSPEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELPSEFIHMYI   I +C             +DKYMQNRLVRLVCVFLQSLIRNNIINVKDLFI
Subjt:  KKLINSPEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELPSEFIHMYI---ILTCVRYGTFLIVVITPQDKYMQNRLVRLVCVFLQSLIRNNIINVKDLFI

Query:  EVQAFCIEFSRIREAAALFRLLKSLE
        EVQAFCIEFSRIREAAALFRLLKSLE
Subjt:  EVQAFCIEFSRIREAAALFRLLKSLE

XP_023007169.1 CCR4-NOT transcription complex subunit 11-like [Cucurbita maxima]1.1e-16592.94Show/hide
Query:  QFLKKSASDYIVHFDPSLHALPKREQLQQQFCDELQAQSFDCFSKDASVRNVVPDPDVPRGCDANSVEFDQQPGVVPKVGSGEKDVVGLLSNVSPRGSSP
        +FLKKSASDYIVHFDPSLHALPKREQLQQQFCDE+QAQSFD FSKDASVRNVVPDPDVPRGCDANSVEFDQQPG+VPKVGSGEKDVVGLLSNVSPRGSSP
Subjt:  QFLKKSASDYIVHFDPSLHALPKREQLQQQFCDELQAQSFDCFSKDASVRNVVPDPDVPRGCDANSVEFDQQPGVVPKVGSGEKDVVGLLSNVSPRGSSP

Query:  EWIRPPPPRLPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTPRKLPELVENNPLVAVEVL
        EWIRPPPPRLPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTPRKLPELVENNPLVAVEVL
Subjt:  EWIRPPPPRLPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTPRKLPELVENNPLVAVEVL

Query:  KKLINSPEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELPSEFIHMYI---ILTCVRYGTFLIVVITPQDKYMQNRLVRLVCVFLQSLIRNNIINVKDLFI
        KKLINSPEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELPSEFIHMYI   I +C             +DKYMQNRLVRLVCVFLQSLIRNNIINVKDLFI
Subjt:  KKLINSPEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELPSEFIHMYI---ILTCVRYGTFLIVVITPQDKYMQNRLVRLVCVFLQSLIRNNIINVKDLFI

Query:  EVQAFCIEFSRIREAAALFRLLKSLE
        EVQAFCIEFSRIREAAALFRLLKSLE
Subjt:  EVQAFCIEFSRIREAAALFRLLKSLE

XP_023532661.1 CCR4-NOT transcription complex subunit 11-like [Cucurbita pepo subsp. pepo]4.5e-16492.94Show/hide
Query:  QFLKKSASDYIVHFDPSLHALPKREQLQQQFCDELQAQSFDCFSKDASVRNVVPDPDVPRGCDANSVEFDQQPGVVPKVGSGEKDVVGLLSNVSPRGSSP
        +FLKKSASDYIVHFDPS HALPKREQLQQQF DELQAQSFDCFSKDASVRNVVPDPDVPRG DANSVEFDQQPGVVPKVGSGEKDVVGLLSNVSPRGSSP
Subjt:  QFLKKSASDYIVHFDPSLHALPKREQLQQQFCDELQAQSFDCFSKDASVRNVVPDPDVPRGCDANSVEFDQQPGVVPKVGSGEKDVVGLLSNVSPRGSSP

Query:  EWIRPPPPRLPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTPRKLPELVENNPLVAVEVL
        EWIRPPPPRLPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTPRKLPELVENNPLVAVEVL
Subjt:  EWIRPPPPRLPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTPRKLPELVENNPLVAVEVL

Query:  KKLINSPEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELPSEFIHMYI---ILTCVRYGTFLIVVITPQDKYMQNRLVRLVCVFLQSLIRNNIINVKDLFI
        KKLINSPEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELPSEFIHMYI   I +C             +DKYMQNRLVRLVCVFLQSLIRNNIINVKDLFI
Subjt:  KKLINSPEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELPSEFIHMYI---ILTCVRYGTFLIVVITPQDKYMQNRLVRLVCVFLQSLIRNNIINVKDLFI

Query:  EVQAFCIEFSRIREAAALFRLLKSLE
        EVQAFCIEFSRIREAAALFRLLKSLE
Subjt:  EVQAFCIEFSRIREAAALFRLLKSLE

TrEMBL top hitse value%identityAlignment
A0A6J1DVV5 CCR4-NOT transcription complex subunit 111.4e-14281.54Show/hide
Query:  QFLKKSASDYIVHFDPSLHALPKREQLQQQFCDELQAQSFDCFSKDASVRNVVPDPDVPRGCDANSVEFDQQPGVVPKVGSGEKD--VVGLLSNVSPRGS
        +FLK+SASDYI  FDPSLHA P+ EQLQQQFCD++QAQSFDCFSKD+SVRNVVPDPDVP+GCDANS EFD  PGVVPK+GSGE+D  ++GLLSN+S  G 
Subjt:  QFLKKSASDYIVHFDPSLHALPKREQLQQQFCDELQAQSFDCFSKDASVRNVVPDPDVPRGCDANSVEFDQQPGVVPKVGSGEKD--VVGLLSNVSPRGS

Query:  SPEWIRPPPPRLPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTPRKLPELVENNPLVAVE
        SPEWIRP PPRLP QNGELVWLN+DD HEL WDH +CVD+SRGAA RDLIAKA+KGPL PA+ EQ V EL +DPKLVYHCGLTPRKLPELVENNPL+AVE
Subjt:  SPEWIRPPPPRLPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTPRKLPELVENNPLVAVE

Query:  VLKKLINSPEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELPSEFIHMYIILTCVRYGTFLIVVITPQDKYMQNRLVRLVCVFLQSLIRNNIINVKDLFIE
        VLKKLINSPEIAEYF VLVNMDMSLHSMEVVNRLTTAVELPSEFIHMY I  C+     +      +DKYMQNRLVRLVCVFLQSLIRNNIINVKDLFIE
Subjt:  VLKKLINSPEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELPSEFIHMYIILTCVRYGTFLIVVITPQDKYMQNRLVRLVCVFLQSLIRNNIINVKDLFIE

Query:  VQAFCIEFSRIREAAALFRLLKSLE
        VQAFCIEFSRIREAAALFRLLKSLE
Subjt:  VQAFCIEFSRIREAAALFRLLKSLE

A0A6J1EVU1 CCR4-NOT transcription complex subunit 115.2e-14281.23Show/hide
Query:  QFLKKSASDYIVHFDPSLHALPKREQLQQQFCDELQAQSFDCFSKDASVRNVVPDPDVPRGCDANSVEFDQQPGVVPKVGSGEKD--VVGLLSNVSPRGS
        +FLK+SASDYI  FDPSLHA P+ EQLQQQFCD+ Q QSFDCF KD SVRNVVPDPDVP GCDANS EFD  PGVVPK+GSG++D  ++GLLSN+S +GS
Subjt:  QFLKKSASDYIVHFDPSLHALPKREQLQQQFCDELQAQSFDCFSKDASVRNVVPDPDVPRGCDANSVEFDQQPGVVPKVGSGEKD--VVGLLSNVSPRGS

Query:  SPEWIRPPPPRLPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTPRKLPELVENNPLVAVE
        SPEWIRP PPRLP QNGELVWLN+DD HEL WDH +CVD+SRGAA RDLIAKA+KGPLIP++ EQ V EL NDPKLVYHCGLTPRKLPELVENNPL+AVE
Subjt:  SPEWIRPPPPRLPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTPRKLPELVENNPLVAVE

Query:  VLKKLINSPEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELPSEFIHMYIILTCVRYGTFLIVVITPQDKYMQNRLVRLVCVFLQSLIRNNIINVKDLFIE
        VLKKLINSPEIAEYF VLVNMDMSLHSMEVVNRLTTAVELPSEFIHMY I  C+     +      +DKYMQNRLVRLVCVFLQSLIRNNIINVKDLFIE
Subjt:  VLKKLINSPEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELPSEFIHMYIILTCVRYGTFLIVVITPQDKYMQNRLVRLVCVFLQSLIRNNIINVKDLFIE

Query:  VQAFCIEFSRIREAAALFRLLKSLE
        VQAFCIEFSRIREAAALFRLLKSLE
Subjt:  VQAFCIEFSRIREAAALFRLLKSLE

A0A6J1G5K5 CCR4-NOT transcription complex subunit 111.2e-16793.87Show/hide
Query:  QFLKKSASDYIVHFDPSLHALPKREQLQQQFCDELQAQSFDCFSKDASVRNVVPDPDVPRGCDANSVEFDQQPGVVPKVGSGEKDVVGLLSNVSPRGSSP
        +FLKKSASDYIVHFDPSLHALPKREQLQQQFCDELQAQSFDCFSKDASVRNVVPDPDVPRGCDANSVEFDQQPGVVPKVGSGEKDVVGLLSNVSPRGSSP
Subjt:  QFLKKSASDYIVHFDPSLHALPKREQLQQQFCDELQAQSFDCFSKDASVRNVVPDPDVPRGCDANSVEFDQQPGVVPKVGSGEKDVVGLLSNVSPRGSSP

Query:  EWIRPPPPRLPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTPRKLPELVENNPLVAVEVL
        EWIRPPPPRLPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTPRKLPELVENNPLVAVEVL
Subjt:  EWIRPPPPRLPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTPRKLPELVENNPLVAVEVL

Query:  KKLINSPEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELPSEFIHMYI---ILTCVRYGTFLIVVITPQDKYMQNRLVRLVCVFLQSLIRNNIINVKDLFI
        KKLINSPEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELPSEFIHMYI   I +C             +DKYMQNRLVRLVCVFLQSLIRNNIINVKDLFI
Subjt:  KKLINSPEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELPSEFIHMYI---ILTCVRYGTFLIVVITPQDKYMQNRLVRLVCVFLQSLIRNNIINVKDLFI

Query:  EVQAFCIEFSRIREAAALFRLLKSLE
        EVQAFCIEFSRIREAAALFRLLKSLE
Subjt:  EVQAFCIEFSRIREAAALFRLLKSLE

A0A6J1ICB1 CCR4-NOT transcription complex subunit 115.2e-14281.23Show/hide
Query:  QFLKKSASDYIVHFDPSLHALPKREQLQQQFCDELQAQSFDCFSKDASVRNVVPDPDVPRGCDANSVEFDQQPGVVPKVGSGEKD--VVGLLSNVSPRGS
        +FLK+SASDYI  FDPSLHA P+ EQLQQQFCD+ Q QSFDCF KD SVRNVVPDPDVP GCDANS EFD  PGVVPK+GSG++D  ++GLLSN+S +GS
Subjt:  QFLKKSASDYIVHFDPSLHALPKREQLQQQFCDELQAQSFDCFSKDASVRNVVPDPDVPRGCDANSVEFDQQPGVVPKVGSGEKD--VVGLLSNVSPRGS

Query:  SPEWIRPPPPRLPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTPRKLPELVENNPLVAVE
        SPEWIRP PPRLP QNGELVWLN+DD HEL WDH +CVD+SRGAA RDLIAKA+KGPLIP++ EQ V EL NDPKLVYHCGLTPRKLPELVENNPL+AVE
Subjt:  SPEWIRPPPPRLPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTPRKLPELVENNPLVAVE

Query:  VLKKLINSPEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELPSEFIHMYIILTCVRYGTFLIVVITPQDKYMQNRLVRLVCVFLQSLIRNNIINVKDLFIE
        VLKKLINSPEIAEYF VLVNMDMSLHSMEVVNRLTTAVELPSEFIHMY I  C+     +      +DKYMQNRLVRLVCVFLQSLIRNNIINVKDLFIE
Subjt:  VLKKLINSPEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELPSEFIHMYIILTCVRYGTFLIVVITPQDKYMQNRLVRLVCVFLQSLIRNNIINVKDLFIE

Query:  VQAFCIEFSRIREAAALFRLLKSLE
        VQAFCIEFSRIREAAALFRLLKSLE
Subjt:  VQAFCIEFSRIREAAALFRLLKSLE

A0A6J1L478 CCR4-NOT transcription complex subunit 115.1e-16692.94Show/hide
Query:  QFLKKSASDYIVHFDPSLHALPKREQLQQQFCDELQAQSFDCFSKDASVRNVVPDPDVPRGCDANSVEFDQQPGVVPKVGSGEKDVVGLLSNVSPRGSSP
        +FLKKSASDYIVHFDPSLHALPKREQLQQQFCDE+QAQSFD FSKDASVRNVVPDPDVPRGCDANSVEFDQQPG+VPKVGSGEKDVVGLLSNVSPRGSSP
Subjt:  QFLKKSASDYIVHFDPSLHALPKREQLQQQFCDELQAQSFDCFSKDASVRNVVPDPDVPRGCDANSVEFDQQPGVVPKVGSGEKDVVGLLSNVSPRGSSP

Query:  EWIRPPPPRLPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTPRKLPELVENNPLVAVEVL
        EWIRPPPPRLPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTPRKLPELVENNPLVAVEVL
Subjt:  EWIRPPPPRLPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTPRKLPELVENNPLVAVEVL

Query:  KKLINSPEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELPSEFIHMYI---ILTCVRYGTFLIVVITPQDKYMQNRLVRLVCVFLQSLIRNNIINVKDLFI
        KKLINSPEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELPSEFIHMYI   I +C             +DKYMQNRLVRLVCVFLQSLIRNNIINVKDLFI
Subjt:  KKLINSPEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELPSEFIHMYI---ILTCVRYGTFLIVVITPQDKYMQNRLVRLVCVFLQSLIRNNIINVKDLFI

Query:  EVQAFCIEFSRIREAAALFRLLKSLE
        EVQAFCIEFSRIREAAALFRLLKSLE
Subjt:  EVQAFCIEFSRIREAAALFRLLKSLE

SwissProt top hitse value%identityAlignment
A4QP78 CCR4-NOT transcription complex subunit 111.3e-7064.47Show/hide
Query:  PEWIRPPPPRLPTQNGELVWLN-VDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTPRKLPELVENNPLVAVE
        PE+IRP PP L  ++ EL WLN  + +H + WD  +CV +  G   + ++AKA K PL  A+  Q + ELE D KLVYH GLTP KLP+LVENNPLVA+E
Subjt:  PEWIRPPPPRLPTQNGELVWLN-VDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTPRKLPELVENNPLVAVE

Query:  VLKKLINSPEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELPSEFIHMYI---ILTCVRYGTFLIVVITPQDKYMQNRLVRLVCVFLQSLIRNNIINVKDL
        +L KL++S +I EYF VLVNMDMSLHSMEVVNRLTTAV+LP EFIH+YI   I TC +           +DKYMQNRLVRLVCVFLQSLIRN IINV+DL
Subjt:  VLKKLINSPEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELPSEFIHMYI---ILTCVRYGTFLIVVITPQDKYMQNRLVRLVCVFLQSLIRNNIINVKDL

Query:  FIEVQAFCIEFSRIREAAALFRLLKSLE
        FIEVQAFCIEFSRIREAA LFRLLK+L+
Subjt:  FIEVQAFCIEFSRIREAAALFRLLKSLE

B0BNA9 CCR4-NOT transcription complex subunit 112.4e-7256.54Show/hide
Query:  ASVRNVVPDPDVPRGCDANSVEFDQQPG--VVPKVGSGEKDVVGLLSNVSPRGSSPEWIRPPPPRLPTQNGELVWLN-VDDDHELSWDHEICVDSSRGAA
        AS  +++ DPD     D+++  FD      +   + SG K  +            PE+IRPPPP L     EL WLN  + +H + WD  +CV +S G  
Subjt:  ASVRNVVPDPDVPRGCDANSVEFDQQPG--VVPKVGSGEKDVVGLLSNVSPRGSSPEWIRPPPPRLPTQNGELVWLN-VDDDHELSWDHEICVDSSRGAA

Query:  ARDLIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTPRKLPELVENNPLVAVEVLKKLINSPEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELPSEFI
         + ++AKA K PL   +  Q + ELE DPKLVYH GLTP KLP+LVENNPLVA+E+L KL+ S +I EYF VLVNMDMSLHSMEVVNRLTTAV+LP EFI
Subjt:  ARDLIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTPRKLPELVENNPLVAVEVLKKLINSPEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELPSEFI

Query:  HMYI---ILTCVRYGTFLIVVITPQDKYMQNRLVRLVCVFLQSLIRNNIINVKDLFIEVQAFCIEFSRIREAAALFRLLKSLE
        H+YI   I TC +           +DKYMQNRLVRLVCVFLQSLIRN IINV+DLFIEVQAFCIEFSRIREAA LFRLLK+L+
Subjt:  HMYI---ILTCVRYGTFLIVVITPQDKYMQNRLVRLVCVFLQSLIRNNIINVKDLFIEVQAFCIEFSRIREAAALFRLLKSLE

Q1ZXI2 CCR4-NOT transcription complex subunit 112.9e-4154.29Show/hide
Query:  RDLIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTPRKLPELVENNPLVAVEVLKKLINSPEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELPSEFIH
        RDL+ KA+KG L  ++  Q   E++ DPKL Y+ GLTP+ LP LVENN  VA++ L KLINSP+  ++F  L++M+M+  SMEVVN L T V+LP  FI 
Subjt:  RDLIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTPRKLPELVENNPLVAVEVLKKLINSPEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELPSEFIH

Query:  MYIILTCVRYGTFLIVVITPQDKYMQNRLVRLVCVFLQSLIRNNIINVKDLFIEVQAFCIEFSRIREAAALFRLL
        MY I  C+     +      +DK MQ R VRLVCVF+QSLIRNNIIN+K+LF EVQ FC+EFS+IREA +LF+ +
Subjt:  MYIILTCVRYGTFLIVVITPQDKYMQNRLVRLVCVFLQSLIRNNIINVKDLFIEVQAFCIEFSRIREAAALFRLL

Q9CWN7 CCR4-NOT transcription complex subunit 113.2e-7256.54Show/hide
Query:  ASVRNVVPDPDVPRGCDANSVEFDQQPG--VVPKVGSGEKDVVGLLSNVSPRGSSPEWIRPPPPRLPTQNGELVWLN-VDDDHELSWDHEICVDSSRGAA
        AS  +++ DPD     D+++  FD      +   + SG K  +            PE+IRPPPP L     EL WLN  + +H + WD  +CV +S G  
Subjt:  ASVRNVVPDPDVPRGCDANSVEFDQQPG--VVPKVGSGEKDVVGLLSNVSPRGSSPEWIRPPPPRLPTQNGELVWLN-VDDDHELSWDHEICVDSSRGAA

Query:  ARDLIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTPRKLPELVENNPLVAVEVLKKLINSPEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELPSEFI
         + ++AKA K PL   +  Q + ELE DPKLVYH GLTP KLP+LVENNPLVA+E+L KL+ S +I EYF VLVNMDMSLHSMEVVNRLTTAV+LP EFI
Subjt:  ARDLIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTPRKLPELVENNPLVAVEVLKKLINSPEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELPSEFI

Query:  HMYI---ILTCVRYGTFLIVVITPQDKYMQNRLVRLVCVFLQSLIRNNIINVKDLFIEVQAFCIEFSRIREAAALFRLLKSLE
        H+YI   I TC +           +DKYMQNRLVRLVCVFLQSLIRN IINV+DLFIEVQAFCIEFSRIREAA LFRLLK+L+
Subjt:  HMYI---ILTCVRYGTFLIVVITPQDKYMQNRLVRLVCVFLQSLIRNNIINVKDLFIEVQAFCIEFSRIREAAALFRLLKSLE

Q9UKZ1 CCR4-NOT transcription complex subunit 111.9e-7256.89Show/hide
Query:  ASVRNVVPDPDVPRGCDANSVEFDQQPG--VVPKVGSGEKDVVGLLSNVSPRGSSPEWIRPPPPRLPTQNGELVWLN-VDDDHELSWDHEICVDSSRGAA
        AS  +++ DPD     D+++  FD      +   + SG K  +            PE+IRPPPP L     EL WLN  + DH + WD  +CV +S G  
Subjt:  ASVRNVVPDPDVPRGCDANSVEFDQQPG--VVPKVGSGEKDVVGLLSNVSPRGSSPEWIRPPPPRLPTQNGELVWLN-VDDDHELSWDHEICVDSSRGAA

Query:  ARDLIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTPRKLPELVENNPLVAVEVLKKLINSPEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELPSEFI
         + ++AKA K PL   +  Q + ELE DPKLVYH GLTP KLP+LVENNPLVA+E+L KL+ S +I EYF VLVNMDMSLHSMEVVNRLTTAV+LP EFI
Subjt:  ARDLIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTPRKLPELVENNPLVAVEVLKKLINSPEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELPSEFI

Query:  HMYI---ILTCVRYGTFLIVVITPQDKYMQNRLVRLVCVFLQSLIRNNIINVKDLFIEVQAFCIEFSRIREAAALFRLLKSLE
        H+YI   I TC +           +DKYMQNRLVRLVCVFLQSLIRN IINV+DLFIEVQAFCIEFSRIREAA LFRLLK+L+
Subjt:  HMYI---ILTCVRYGTFLIVVITPQDKYMQNRLVRLVCVFLQSLIRNNIINVKDLFIEVQAFCIEFSRIREAAALFRLLKSLE

Arabidopsis top hitse value%identityAlignment
AT5G18420.1 unknown protein3.6e-10358.61Show/hide
Query:  SVLQFLKKSASDYIVHFDPSLHALPKREQLQQQFCDELQAQSFDCFSKDASVRNVVPDPDVPRGCDANSVEFDQQPGVVPKVGSGEKD--VVGLLSNVSP
        +V + LK SA DYI  FDPS H  P+  +LQ+++ D+           D S++ ++ DPDVPRGCD NS EFD Q GV P++GSG++D  + G L N++ 
Subjt:  SVLQFLKKSASDYIVHFDPSLHALPKREQLQQQFCDELQAQSFDCFSKDASVRNVVPDPDVPRGCDANSVEFDQQPGVVPKVGSGEKD--VVGLLSNVSP

Query:  RGSSPEWIRPPPPRLPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTPRKLPELVENNPLV
         G  P WIRP PPR P    EL+W++ D+ HEL WD ++C D+S GA  RDL+ K +K  L P E E  + EL NDPKLV+HCG+TPRKLP+LVE+NP +
Subjt:  RGSSPEWIRPPPPRLPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTPRKLPELVENNPLV

Query:  AVEVLKKLINSPEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELPSEFIHMYI---ILTCVRYGTFLIVVITPQDKYMQNRLVRLVCVFLQSLIRNNIINV
        AVE+L KL NS EI +Y+  L NMDMSLHSMEVVNRLTTAVELP +FI MYI   I +C             QDKYMQNRLVRLVCVFLQSLIRN IINV
Subjt:  AVEVLKKLINSPEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELPSEFIHMYI---ILTCVRYGTFLIVVITPQDKYMQNRLVRLVCVFLQSLIRNNIINV

Query:  KDLFIEVQAFCIEFSRIREAAALFRLLKSLE
        KDLFIEVQAFCIEFSR+REAA LFRLLK L+
Subjt:  KDLFIEVQAFCIEFSRIREAAALFRLLKSLE

AT5G18420.2 unknown protein6.1e-10358.61Show/hide
Query:  SVLQFLKKSASDYIVHFDPSLHALPKREQLQQQFCDELQAQSFDCFSKDASVRNVVPDPDVPRGCDANSVEFDQQPGVVPKVGSGEKD--VVGLLSNVSP
        +V + LK SA DYI  FDPS H  P+  +LQ+++ D+           D S++ ++ DPDVPRGCD NS EFD Q GV P++GSG++D  + G L N++ 
Subjt:  SVLQFLKKSASDYIVHFDPSLHALPKREQLQQQFCDELQAQSFDCFSKDASVRNVVPDPDVPRGCDANSVEFDQQPGVVPKVGSGEKD--VVGLLSNVSP

Query:  RGSSPEWIRPPPPRLPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTPRKLPELVENNPLV
         G  P WIRP PPR P    EL+W++ D+ HEL WD ++C D+S GA  RDL+ K +K  L P E E  + EL NDPKLV+HCG+TPRKLP+LVE+NP +
Subjt:  RGSSPEWIRPPPPRLPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTPRKLPELVENNPLV

Query:  AVEVLKKLINSPEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELPSEFIHMYI---ILTCVRYGTFLIVVITPQDKYMQNRLVRLVCVFLQSLIRNNIINV
        AVE+L KL NS EI +Y+  L NMDMSLHSMEVVNRLTTAVELP +FI MYI   I +C             QDKYMQNRLVRLVCVFLQSLIRN IINV
Subjt:  AVEVLKKLINSPEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELPSEFIHMYI---ILTCVRYGTFLIVVITPQDKYMQNRLVRLVCVFLQSLIRNNIINV

Query:  KDLFIEVQAFCIEFSRIREAAALFRLLKSLE
        KDLFIEVQAFCIEFSR+REAA LFRLLK L+
Subjt:  KDLFIEVQAFCIEFSRIREAAALFRLLKSLE

AT5G18420.3 unknown protein6.1e-10358.61Show/hide
Query:  SVLQFLKKSASDYIVHFDPSLHALPKREQLQQQFCDELQAQSFDCFSKDASVRNVVPDPDVPRGCDANSVEFDQQPGVVPKVGSGEKD--VVGLLSNVSP
        +V + LK SA DYI  FDPS H  P+  +LQ+++ D+           D S++ ++ DPDVPRGCD NS EFD Q GV P++GSG++D  + G L N++ 
Subjt:  SVLQFLKKSASDYIVHFDPSLHALPKREQLQQQFCDELQAQSFDCFSKDASVRNVVPDPDVPRGCDANSVEFDQQPGVVPKVGSGEKD--VVGLLSNVSP

Query:  RGSSPEWIRPPPPRLPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTPRKLPELVENNPLV
         G  P WIRP PPR P    EL+W++ D+ HEL WD ++C D+S GA  RDL+ K +K  L P E E  + EL NDPKLV+HCG+TPRKLP+LVE+NP +
Subjt:  RGSSPEWIRPPPPRLPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTPRKLPELVENNPLV

Query:  AVEVLKKLINSPEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELPSEFIHMYI---ILTCVRYGTFLIVVITPQDKYMQNRLVRLVCVFLQSLIRNNIINV
        AVE+L KL NS EI +Y+  L NMDMSLHSMEVVNRLTTAVELP +FI MYI   I +C             QDKYMQNRLVRLVCVFLQSLIRN IINV
Subjt:  AVEVLKKLINSPEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELPSEFIHMYI---ILTCVRYGTFLIVVITPQDKYMQNRLVRLVCVFLQSLIRNNIINV

Query:  KDLFIEVQAFCIEFSRIREAAALFRLLKSLE
        KDLFIEVQAFCIEFSR+REAA LFRLLK L+
Subjt:  KDLFIEVQAFCIEFSRIREAAALFRLLKSLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGGGATGTCGGTCTTGCAGTTCCTGAAAAAGTCTGCCTCAGATTACATTGTACATTTCGATCCTTCATTGCATGCTTTACCTAAGCGAGAGCAGTTGCAACAACA
GTTTTGTGATGAACTCCAAGCTCAATCGTTTGATTGCTTTTCTAAAGATGCTTCTGTGAGAAATGTGGTCCCAGACCCTGATGTCCCACGGGGTTGTGATGCAAATTCTG
TGGAGTTTGACCAGCAACCTGGAGTTGTACCTAAAGTGGGATCTGGAGAAAAAGATGTGGTGGGGTTATTGTCTAATGTATCACCTCGAGGATCAAGTCCTGAGTGGATT
AGGCCTCCTCCACCAAGGCTTCCGACACAGAATGGAGAGTTAGTGTGGTTGAACGTTGACGATGATCACGAACTTTCATGGGACCATGAAATATGTGTTGATAGTAGTAG
AGGTGCCGCTGCTAGGGACTTAATTGCAAAAGCTGTGAAGGGCCCTCTTATACCTGCTGAACACGAGCAAGCGGTGGAGGAGTTGGAAAATGACCCAAAGCTTGTATATC
ATTGTGGACTGACACCCAGAAAACTACCTGAACTGGTGGAAAACAATCCTCTCGTTGCAGTTGAAGTTCTAAAGAAATTGATTAATTCCCCTGAAATTGCCGAGTATTTT
CATGTGCTTGTTAACATGGACATGAGTTTACACTCTATGGAAGTTGTCAACAGGCTAACGACAGCTGTTGAACTTCCCTCTGAGTTCATACACATGTACATCATTTTAAC
ATGTGTAAGGTATGGAACATTTTTAATTGTTGTTATTACGCCACAGGACAAGTACATGCAGAACAGATTAGTTCGACTTGTATGTGTTTTTCTACAGAGTCTGATTCGAA
ATAACATCATCAATGTGAAAGATCTTTTCATCGAAGTTCAAGCTTTCTGCATCGAATTCTCTCGCATTAGAGAAGCGGCGGCGTTATTCAGGCTTCTTAAATCTTTGGAA
TGA
mRNA sequenceShow/hide mRNA sequence
ATGATGGGGATGTCGGTCTTGCAGTTCCTGAAAAAGTCTGCCTCAGATTACATTGTACATTTCGATCCTTCATTGCATGCTTTACCTAAGCGAGAGCAGTTGCAACAACA
GTTTTGTGATGAACTCCAAGCTCAATCGTTTGATTGCTTTTCTAAAGATGCTTCTGTGAGAAATGTGGTCCCAGACCCTGATGTCCCACGGGGTTGTGATGCAAATTCTG
TGGAGTTTGACCAGCAACCTGGAGTTGTACCTAAAGTGGGATCTGGAGAAAAAGATGTGGTGGGGTTATTGTCTAATGTATCACCTCGAGGATCAAGTCCTGAGTGGATT
AGGCCTCCTCCACCAAGGCTTCCGACACAGAATGGAGAGTTAGTGTGGTTGAACGTTGACGATGATCACGAACTTTCATGGGACCATGAAATATGTGTTGATAGTAGTAG
AGGTGCCGCTGCTAGGGACTTAATTGCAAAAGCTGTGAAGGGCCCTCTTATACCTGCTGAACACGAGCAAGCGGTGGAGGAGTTGGAAAATGACCCAAAGCTTGTATATC
ATTGTGGACTGACACCCAGAAAACTACCTGAACTGGTGGAAAACAATCCTCTCGTTGCAGTTGAAGTTCTAAAGAAATTGATTAATTCCCCTGAAATTGCCGAGTATTTT
CATGTGCTTGTTAACATGGACATGAGTTTACACTCTATGGAAGTTGTCAACAGGCTAACGACAGCTGTTGAACTTCCCTCTGAGTTCATACACATGTACATCATTTTAAC
ATGTGTAAGGTATGGAACATTTTTAATTGTTGTTATTACGCCACAGGACAAGTACATGCAGAACAGATTAGTTCGACTTGTATGTGTTTTTCTACAGAGTCTGATTCGAA
ATAACATCATCAATGTGAAAGATCTTTTCATCGAAGTTCAAGCTTTCTGCATCGAATTCTCTCGCATTAGAGAAGCGGCGGCGTTATTCAGGCTTCTTAAATCTTTGGAA
TGAGACAGACAGAAAGACAGACAGAGTGCTTGCTGCATCTCAGCCGCCATCCTTTTTGTAAATAGCAATTGTTAGCATTTTATATACTCGAGCCTTAGGATCCCCTCTTC
TCCTCTCTCTCCTCTCTCTCTCCTCTCCTACTGTCTCTCTGTTATGGCTTAGCAAACATTTGACTAAATATATATTTGGCTTAGCCCACTTCCCATTCGCATTTTGTTAT
GCAGTAATATGTCTCTATTCAGTGCTCTTCAATTCCTGTTTTTACATGGATATAGTGATACAAACACATTATGACTAACTTCTCC
Protein sequenceShow/hide protein sequence
MMGMSVLQFLKKSASDYIVHFDPSLHALPKREQLQQQFCDELQAQSFDCFSKDASVRNVVPDPDVPRGCDANSVEFDQQPGVVPKVGSGEKDVVGLLSNVSPRGSSPEWI
RPPPPRLPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTPRKLPELVENNPLVAVEVLKKLINSPEIAEYF
HVLVNMDMSLHSMEVVNRLTTAVELPSEFIHMYIILTCVRYGTFLIVVITPQDKYMQNRLVRLVCVFLQSLIRNNIINVKDLFIEVQAFCIEFSRIREAAALFRLLKSLE