CuGenDBv2

Gene ID	CmoCh02G006690
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	NAC domain-containing protein
Genome location	Cmo_Chr02:4218196..4218435
RNA-Seq Expression	CmoCh02G006690
Synteny	CmoCh02G006690
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7035316.1 NAC domain-containing protein 86, partial [Cucurbita argyrosperma subsp. argyrosperma]

7.7e-38

98.73

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Query:  MDHENLHYQHPYYPPLELEDFPQLNIMGETKTLMKPECIDEYMKFDKFRDSMNGTLEEILSLCSLPMQEDNVQNSSLLQ
        MDHENLHYQHPYYPPLELEDFPQLNIMGETKTLMKPECIDEYMKFDKFRDSMNGTLEEILSLCSLPMQEDNVQNSS+LQ
Subjt:  MDHENLHYQHPYYPPLELEDFPQLNIMGETKTLMKPECIDEYMKFDKFRDSMNGTLEEILSLCSLPMQEDNVQNSSLLQ

XP_022149730.1 NAC domain-containing protein 67 [Momordica charantia]

2.4e-31

87.65

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Query:  MDHENLHYQHPYYPPLELEDFPQLNIMGETKTLMKPECIDEYMKFDKFRDSMNGTLEEILSLCSL--PMQEDNVQNSSLLQ
        +DH NLHYQHPYYPPLEL+DFPQLNI+GETKTLMKPE IDEYMKFDKFR+SMNGTLEEILSLCSL  PMQED+VQ SSLLQ
Subjt:  MDHENLHYQHPYYPPLELEDFPQLNIMGETKTLMKPECIDEYMKFDKFRDSMNGTLEEILSLCSL--PMQEDNVQNSSLLQ

XP_022947347.1 NAC domain-containing protein 96 [Cucurbita moschata]

4.5e-38

100

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Query:  MDHENLHYQHPYYPPLELEDFPQLNIMGETKTLMKPECIDEYMKFDKFRDSMNGTLEEILSLCSLPMQEDNVQNSSLLQ
        MDHENLHYQHPYYPPLELEDFPQLNIMGETKTLMKPECIDEYMKFDKFRDSMNGTLEEILSLCSLPMQEDNVQNSSLLQ
Subjt:  MDHENLHYQHPYYPPLELEDFPQLNIMGETKTLMKPECIDEYMKFDKFRDSMNGTLEEILSLCSLPMQEDNVQNSSLLQ

XP_023007203.1 NAC domain-containing protein 96-like [Cucurbita maxima]

4.5e-38

100

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Query:  MDHENLHYQHPYYPPLELEDFPQLNIMGETKTLMKPECIDEYMKFDKFRDSMNGTLEEILSLCSLPMQEDNVQNSSLLQ
        MDHENLHYQHPYYPPLELEDFPQLNIMGETKTLMKPECIDEYMKFDKFRDSMNGTLEEILSLCSLPMQEDNVQNSSLLQ
Subjt:  MDHENLHYQHPYYPPLELEDFPQLNIMGETKTLMKPECIDEYMKFDKFRDSMNGTLEEILSLCSLPMQEDNVQNSSLLQ

XP_023533360.1 NAC domain-containing protein 96-like [Cucurbita pepo subsp. pepo]

4.5e-38

100

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Query:  MDHENLHYQHPYYPPLELEDFPQLNIMGETKTLMKPECIDEYMKFDKFRDSMNGTLEEILSLCSLPMQEDNVQNSSLLQ
        MDHENLHYQHPYYPPLELEDFPQLNIMGETKTLMKPECIDEYMKFDKFRDSMNGTLEEILSLCSLPMQEDNVQNSSLLQ
Subjt:  MDHENLHYQHPYYPPLELEDFPQLNIMGETKTLMKPECIDEYMKFDKFRDSMNGTLEEILSLCSLPMQEDNVQNSSLLQ

TrEMBL top hits

e value

%identity

Alignment

A0A5A7UFZ1 NAC domain-containing protein 76

9.2e-29

83.53

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Query:  MDHE-NLHYQHPYYPPLELEDFPQLNIMGETKTLMKPECIDEYMK-FDKFRDSMNGTLEEILSLCSLP-MQEDN---VQNSSLLQ
        +DHE N+HYQHPYYPPLE+EDFPQLNIMGETK+LMKPECIDEYMK FDKFRDSMNG+LEEILSLCSLP M EDN    Q+SSLLQ
Subjt:  MDHE-NLHYQHPYYPPLELEDFPQLNIMGETKTLMKPECIDEYMK-FDKFRDSMNGTLEEILSLCSLP-MQEDN---VQNSSLLQ

A0A5D3BAU6 NAC domain-containing protein 76

9.2e-29

83.53

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Query:  MDHE-NLHYQHPYYPPLELEDFPQLNIMGETKTLMKPECIDEYMK-FDKFRDSMNGTLEEILSLCSLP-MQEDN---VQNSSLLQ
        +DHE N+HYQHPYYPPLE+EDFPQLNIMGETK+LMKPECIDEYMK FDKFRDSMNG+LEEILSLCSLP M EDN    Q+SSLLQ
Subjt:  MDHE-NLHYQHPYYPPLELEDFPQLNIMGETKTLMKPECIDEYMK-FDKFRDSMNGTLEEILSLCSLP-MQEDN---VQNSSLLQ

A0A6J1D6J7 NAC domain-containing protein 67

1.2e-31

87.65

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Query:  MDHENLHYQHPYYPPLELEDFPQLNIMGETKTLMKPECIDEYMKFDKFRDSMNGTLEEILSLCSL--PMQEDNVQNSSLLQ
        +DH NLHYQHPYYPPLEL+DFPQLNI+GETKTLMKPE IDEYMKFDKFR+SMNGTLEEILSLCSL  PMQED+VQ SSLLQ
Subjt:  MDHENLHYQHPYYPPLELEDFPQLNIMGETKTLMKPECIDEYMKFDKFRDSMNGTLEEILSLCSL--PMQEDNVQNSSLLQ

A0A6J1G673 NAC domain-containing protein 96

2.2e-38

100

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Query:  MDHENLHYQHPYYPPLELEDFPQLNIMGETKTLMKPECIDEYMKFDKFRDSMNGTLEEILSLCSLPMQEDNVQNSSLLQ
        MDHENLHYQHPYYPPLELEDFPQLNIMGETKTLMKPECIDEYMKFDKFRDSMNGTLEEILSLCSLPMQEDNVQNSSLLQ
Subjt:  MDHENLHYQHPYYPPLELEDFPQLNIMGETKTLMKPECIDEYMKFDKFRDSMNGTLEEILSLCSLPMQEDNVQNSSLLQ

A0A6J1L728 NAC domain-containing protein 96-like

2.2e-38

100

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Query:  MDHENLHYQHPYYPPLELEDFPQLNIMGETKTLMKPECIDEYMKFDKFRDSMNGTLEEILSLCSLPMQEDNVQNSSLLQ
        MDHENLHYQHPYYPPLELEDFPQLNIMGETKTLMKPECIDEYMKFDKFRDSMNGTLEEILSLCSLPMQEDNVQNSSLLQ
Subjt:  MDHENLHYQHPYYPPLELEDFPQLNIMGETKTLMKPECIDEYMKFDKFRDSMNGTLEEILSLCSLPMQEDNVQNSSLLQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G54330.1 NAC domain containing protein 20

1.1e-05

46.88

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Query:  DHENL--HYQH--PYYPPLELEDFPQLNIMGETKTLMKPECIDEYMKFDKFRDSMNGTLEEILS
        DH++L  +Y H  PY+PPL+L+DFPQL+ M E +       I    +  + RDSMNGTL+EI S
Subjt:  DHENL--HYQH--PYYPPLELEDFPQLNIMGETKTLMKPECIDEYMKFDKFRDSMNGTLEEILS

Sequences

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CDS sequence

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ATGGATCATGAGAATCTTCATTACCAGCATCCTTACTACCCACCGTTGGAGCTCGAGGACTTCCCACAGCTGAACATAATGGGGGAGACGAAGACGTTAATGAAGCCCGA
GTGCATTGACGAGTACATGAAGTTCGACAAGTTCCGAGACTCGATGAATGGAACTCTAGAGGAGATTTTGTCTTTGTGTAGTCTTCCCATGCAAGAAGATAATGTCCAAA
ACTCTTCCTTATTACAGTGA

mRNA sequence

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Protein sequence

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MDHENLHYQHPYYPPLELEDFPQLNIMGETKTLMKPECIDEYMKFDKFRDSMNGTLEEILSLCSLPMQEDNVQNSSLLQ

CmoCh02G006690 (gene) of Cucurbita moschata (Rifu) v1 genome