; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh02G007120 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G007120
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description6,7-dimethyl-8-ribityllumazine synthase
Genome locationCmo_Chr02:4456652..4457110
RNA-Seq ExpressionCmoCh02G007120
SyntenyCmoCh02G007120
Gene Ontology termsNA
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008463824.1 PREDICTED: uncharacterized protein LOC103501874 [Cucumis melo]9.8e-6685.26Show/hide
Query:  MGNSLRCCLACVLPCGALDLIRIVHLSGHVEEIAHPITAGEVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKKNGGNTFKNS
        MGNSLRCCLACVLPCGALDLIRIVHL+GHVEEI HPITAG+VLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIP+TSLPEKK+N G T K  
Subjt:  MGNSLRCCLACVLPCGALDLIRIVHLSGHVEEIAHPITAGEVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKKNGGNTFKNS

Query:  SKKTKNST-AAVP---VDATSYLSDIVSDKKPSRRDRRSGSRVVVWRPHLESISED
        S+K KN T AAVP    D+ SYLSD+VSDKKPSRR+RRSGSRV+VWRPHLESISED
Subjt:  SKKTKNST-AAVP---VDATSYLSDIVSDKKPSRRDRRSGSRVVVWRPHLESISED

XP_022947823.1 uncharacterized protein LOC111451584 [Cucurbita moschata]1.1e-77100Show/hide
Query:  MGNSLRCCLACVLPCGALDLIRIVHLSGHVEEIAHPITAGEVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKKNGGNTFKNS
        MGNSLRCCLACVLPCGALDLIRIVHLSGHVEEIAHPITAGEVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKKNGGNTFKNS
Subjt:  MGNSLRCCLACVLPCGALDLIRIVHLSGHVEEIAHPITAGEVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKKNGGNTFKNS

Query:  SKKTKNSTAAVPVDATSYLSDIVSDKKPSRRDRRSGSRVVVWRPHLESISED
        SKKTKNSTAAVPVDATSYLSDIVSDKKPSRRDRRSGSRVVVWRPHLESISED
Subjt:  SKKTKNSTAAVPVDATSYLSDIVSDKKPSRRDRRSGSRVVVWRPHLESISED

XP_023007260.1 uncharacterized protein LOC111499799 [Cucurbita maxima]3.6e-7698.03Show/hide
Query:  MGNSLRCCLACVLPCGALDLIRIVHLSGHVEEIAHPITAGEVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKKNGGNTFKNS
        MGNSLRCCLACVLPCGALDLIRIVHLSGHVEEIAHPITAGEVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKKNGG TFKNS
Subjt:  MGNSLRCCLACVLPCGALDLIRIVHLSGHVEEIAHPITAGEVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKKNGGNTFKNS

Query:  SKKTKNSTAAVPVDATSYLSDIVSDKKPSRRDRRSGSRVVVWRPHLESISED
        SKKTKNSTAAVP+DATSYLSDIVSDKKPSRRDRR GSRVVVWRPHLESISED
Subjt:  SKKTKNSTAAVPVDATSYLSDIVSDKKPSRRDRRSGSRVVVWRPHLESISED

XP_023534513.1 uncharacterized protein LOC111796057 [Cucurbita pepo subsp. pepo]9.4e-7798.68Show/hide
Query:  MGNSLRCCLACVLPCGALDLIRIVHLSGHVEEIAHPITAGEVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKKNGGNTFKNS
        MGNSLRCCLACVLPCGALDLIRIVHLSGHVEEIAHPITAGEVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKKNGGNTFKNS
Subjt:  MGNSLRCCLACVLPCGALDLIRIVHLSGHVEEIAHPITAGEVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKKNGGNTFKNS

Query:  SKKTKNSTAAVPVDATSYLSDIVSDKKPSRRDRRSGSRVVVWRPHLESISED
        SKKTKNSTAAVPVD TSYLSDIVSDKKPSRRDRR GSRVVVWRPHLESISED
Subjt:  SKKTKNSTAAVPVDATSYLSDIVSDKKPSRRDRRSGSRVVVWRPHLESISED

XP_038902054.1 uncharacterized protein LOC120088703 [Benincasa hispida]1.2e-6384.52Show/hide
Query:  MGNSLRCCLACVLPCGALDLIRIVHLSGHVEEIAHPITAGEVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKKNGGNTFKNS
        MGNSLRCCLACVLPCGALDLIRIVHL+GHVEEIAHPITAG+VLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKK+N G T K  
Subjt:  MGNSLRCCLACVLPCGALDLIRIVHLSGHVEEIAHPITAGEVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKKNGGNTFKNS

Query:  SKKTKNSTAA---VPVDATSYLSDIVSDKKPSRRDRRSGSRVVVWRPHLESISED
        S+K K+ T A      D  SYLSD+VSDKKPSRR+RR GSRVVVWRPHLESISED
Subjt:  SKKTKNSTAA---VPVDATSYLSDIVSDKKPSRRDRRSGSRVVVWRPHLESISED

TrEMBL top hitse value%identityAlignment
A0A0A0KBY5 Uncharacterized protein5.8e-6485.16Show/hide
Query:  MGNSLRCCLACVLPCGALDLIRIVHLSGHVEEIAHPITAGEVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKKNGGNTFKNS
        MGNSLRCCLACVLPCGALDLIRIVHL+GHVEEIAHPITAG+VLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIP+TSLPEKK+N   T K  
Subjt:  MGNSLRCCLACVLPCGALDLIRIVHLSGHVEEIAHPITAGEVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKKNGGNTFKNS

Query:  SKKTKNST-AAVP--VDATSYLSDIVSDKKPSRRDRRSGSRVVVWRPHLESISED
        S+K KN T AAVP   D  SYLSD+VSDKKPSRR+RR GSRV+VWRPHLESISED
Subjt:  SKKTKNST-AAVP--VDATSYLSDIVSDKKPSRRDRRSGSRVVVWRPHLESISED

A0A1S3CK32 uncharacterized protein LOC1035018744.7e-6685.26Show/hide
Query:  MGNSLRCCLACVLPCGALDLIRIVHLSGHVEEIAHPITAGEVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKKNGGNTFKNS
        MGNSLRCCLACVLPCGALDLIRIVHL+GHVEEI HPITAG+VLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIP+TSLPEKK+N G T K  
Subjt:  MGNSLRCCLACVLPCGALDLIRIVHLSGHVEEIAHPITAGEVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKKNGGNTFKNS

Query:  SKKTKNST-AAVP---VDATSYLSDIVSDKKPSRRDRRSGSRVVVWRPHLESISED
        S+K KN T AAVP    D+ SYLSD+VSDKKPSRR+RRSGSRV+VWRPHLESISED
Subjt:  SKKTKNST-AAVP---VDATSYLSDIVSDKKPSRRDRRSGSRVVVWRPHLESISED

A0A5A7UMR0 6,7-dimethyl-8-ribityllumazine synthase4.7e-6685.26Show/hide
Query:  MGNSLRCCLACVLPCGALDLIRIVHLSGHVEEIAHPITAGEVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKKNGGNTFKNS
        MGNSLRCCLACVLPCGALDLIRIVHL+GHVEEI HPITAG+VLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIP+TSLPEKK+N G T K  
Subjt:  MGNSLRCCLACVLPCGALDLIRIVHLSGHVEEIAHPITAGEVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKKNGGNTFKNS

Query:  SKKTKNST-AAVP---VDATSYLSDIVSDKKPSRRDRRSGSRVVVWRPHLESISED
        S+K KN T AAVP    D+ SYLSD+VSDKKPSRR+RRSGSRV+VWRPHLESISED
Subjt:  SKKTKNST-AAVP---VDATSYLSDIVSDKKPSRRDRRSGSRVVVWRPHLESISED

A0A6J1G7P3 uncharacterized protein LOC1114515845.4e-78100Show/hide
Query:  MGNSLRCCLACVLPCGALDLIRIVHLSGHVEEIAHPITAGEVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKKNGGNTFKNS
        MGNSLRCCLACVLPCGALDLIRIVHLSGHVEEIAHPITAGEVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKKNGGNTFKNS
Subjt:  MGNSLRCCLACVLPCGALDLIRIVHLSGHVEEIAHPITAGEVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKKNGGNTFKNS

Query:  SKKTKNSTAAVPVDATSYLSDIVSDKKPSRRDRRSGSRVVVWRPHLESISED
        SKKTKNSTAAVPVDATSYLSDIVSDKKPSRRDRRSGSRVVVWRPHLESISED
Subjt:  SKKTKNSTAAVPVDATSYLSDIVSDKKPSRRDRRSGSRVVVWRPHLESISED

A0A6J1L2H4 uncharacterized protein LOC1114997991.7e-7698.03Show/hide
Query:  MGNSLRCCLACVLPCGALDLIRIVHLSGHVEEIAHPITAGEVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKKNGGNTFKNS
        MGNSLRCCLACVLPCGALDLIRIVHLSGHVEEIAHPITAGEVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKKNGG TFKNS
Subjt:  MGNSLRCCLACVLPCGALDLIRIVHLSGHVEEIAHPITAGEVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKKNGGNTFKNS

Query:  SKKTKNSTAAVPVDATSYLSDIVSDKKPSRRDRRSGSRVVVWRPHLESISED
        SKKTKNSTAAVP+DATSYLSDIVSDKKPSRRDRR GSRVVVWRPHLESISED
Subjt:  SKKTKNSTAAVPVDATSYLSDIVSDKKPSRRDRRSGSRVVVWRPHLESISED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G06980.1 unknown protein2.3e-4460.48Show/hide
Query:  MGNSLRCCLACVLPCGALDLIRIVHLSGHVEEIAHPITAGEVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKKNGGNTFKNS
        MGNSLRCCLACVLPCGALDLIRIVHL+G+VEEI   ITAGE+L+ANPNHVLSKP SQGVVR+ILILSPESELKRGSIYFLIP +SLPEKK+   +T +  
Subjt:  MGNSLRCCLACVLPCGALDLIRIVHLSGHVEEIAHPITAGEVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKKNGGNTFKNS

Query:  SKKTKNSTAAVPVD----------ATSYLSDIVSDKKPSR--RDRRSGSR---VVVWRPHLESISED
              S  A   +             YL ++VS     +  R RR  SR   V  WRP L+SISED
Subjt:  SKKTKNSTAAVPVD----------ATSYLSDIVSDKKPSR--RDRRSGSR---VVVWRPHLESISED

AT1G29195.1 unknown protein3.1e-3343.92Show/hide
Query:  MGNSLRCCLACVLPCGALDLIRIVHLSGHVEEIAHPITAGEVLKANPNHVLSKPSS-------QGVV--RRILILSPESELKRGSIYFLIPAT-------
        M  ++RCC+AC+LPCGALD+IRIVH +GHVEEI+  ITA E++KA+P HVL KPSS       + V+   +I+I+ PE+EL+RG IYFL+PAT       
Subjt:  MGNSLRCCLACVLPCGALDLIRIVHLSGHVEEIAHPITAGEVLKANPNHVLSKPSS-------QGVV--RRILILSPESELKRGSIYFLIPAT-------

Query:  --SLPEKKKNGGNTFKNSSK--------------------KTKNSTAAVPVDATSYLSDIVSDKKPSRRDRRSGSRVVVWRPHLESISE
           +  +K N     K  S+                    K KN    + + +  YL++I+S+K  +++DRR G RV VWRPHLESISE
Subjt:  --SLPEKKKNGGNTFKNSSK--------------------KTKNSTAAVPVDATSYLSDIVSDKKPSRRDRRSGSRVVVWRPHLESISE

AT2G30230.1 unknown protein1.4e-4660Show/hide
Query:  MGNSLRCCLACVLPCGALDLIRIVHLSGHVEEIAHPITAGEVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKKNGGNTFKNS
        MGNSLRCCLACVLPCGALDLIRIVHL+GHV+EI  P+TAGE+L+ANPNHVLSKP SQGVVR+ILILSPESELKRGSIYFLIP TS+PEKKK         
Subjt:  MGNSLRCCLACVLPCGALDLIRIVHLSGHVEEIAHPITAGEVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKKNGGNTFKNS

Query:  SKKTKNSTAAVPVDATS---------------YLSDIVSDKKPS-----RRDRRSGSR---VVVWRPHLESISED
         KK   S   +  D  S               YL D++  +K S      R RR  SR   V  WRPHL+SI+ED
Subjt:  SKKTKNSTAAVPVDATS---------------YLSDIVSDKKPS-----RRDRRSGSR---VVVWRPHLESISED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAACAGTTTAAGGTGCTGTTTGGCATGTGTTCTTCCTTGTGGAGCTCTAGATTTGATCCGGATCGTCCATTTGAGCGGCCATGTGGAGGAAATTGCCCATCCCAT
CACCGCCGGCGAGGTTCTCAAAGCCAACCCAAATCATGTTCTTAGTAAGCCTTCTTCACAAGGAGTCGTTCGCCGGATTCTGATTCTCTCCCCGGAATCAGAGCTCAAAA
GGGGCAGTATTTATTTCTTGATTCCGGCCACTTCCTTGCCGGAGAAGAAAAAAAACGGCGGCAACACCTTCAAAAATTCGTCAAAAAAAACCAAGAACTCTACCGCCGCC
GTCCCCGTTGACGCTACCTCCTACCTCTCCGATATTGTCTCCGACAAGAAACCGTCGCGGCGGGACCGCCGCAGCGGCAGCCGCGTCGTTGTATGGCGGCCGCATTTAGA
GAGCATCTCTGAAGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTAACAGTTTAAGGTGCTGTTTGGCATGTGTTCTTCCTTGTGGAGCTCTAGATTTGATCCGGATCGTCCATTTGAGCGGCCATGTGGAGGAAATTGCCCATCCCAT
CACCGCCGGCGAGGTTCTCAAAGCCAACCCAAATCATGTTCTTAGTAAGCCTTCTTCACAAGGAGTCGTTCGCCGGATTCTGATTCTCTCCCCGGAATCAGAGCTCAAAA
GGGGCAGTATTTATTTCTTGATTCCGGCCACTTCCTTGCCGGAGAAGAAAAAAAACGGCGGCAACACCTTCAAAAATTCGTCAAAAAAAACCAAGAACTCTACCGCCGCC
GTCCCCGTTGACGCTACCTCCTACCTCTCCGATATTGTCTCCGACAAGAAACCGTCGCGGCGGGACCGCCGCAGCGGCAGCCGCGTCGTTGTATGGCGGCCGCATTTAGA
GAGCATCTCTGAAGACTAA
Protein sequenceShow/hide protein sequence
MGNSLRCCLACVLPCGALDLIRIVHLSGHVEEIAHPITAGEVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKKNGGNTFKNSSKKTKNSTAA
VPVDATSYLSDIVSDKKPSRRDRRSGSRVVVWRPHLESISED