; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh02G007830 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G007830
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionribulose bisphosphate carboxylase/oxygenase activase, chloroplastic-like
Genome locationCmo_Chr02:4857013..4858039
RNA-Seq ExpressionCmoCh02G007830
SyntenyCmoCh02G007830
Gene Ontology termsGO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
InterPro domainsIPR044960 - Ribulose bisphosphate carboxylase/oxygenase activase-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7035389.1 hypothetical protein SDJN02_02185 [Cucurbita argyrosperma subsp. argyrosperma]1.1e-5899.18Show/hide
Query:  DFFGALRARVYDDEVRKWAAGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAALGDANEDVLQFQTSLDSMGKE
        DFFGALRARVYDDEVRKWAAGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAALGDANEDVL+FQTSLDSMGKE
Subjt:  DFFGALRARVYDDEVRKWAAGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAALGDANEDVLQFQTSLDSMGKE

Query:  QRNRLTSLFLKAVQIHLLKTES
        QRNRLTSLFLKAVQIHLLKTES
Subjt:  QRNRLTSLFLKAVQIHLLKTES

XP_022947286.1 ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic-like [Cucurbita moschata]4.8e-59100Show/hide
Query:  DFFGALRARVYDDEVRKWAAGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAALGDANEDVLQFQTSLDSMGKE
        DFFGALRARVYDDEVRKWAAGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAALGDANEDVLQFQTSLDSMGKE
Subjt:  DFFGALRARVYDDEVRKWAAGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAALGDANEDVLQFQTSLDSMGKE

Query:  QRNRLTSLFLKAVQIHLLKTES
        QRNRLTSLFLKAVQIHLLKTES
Subjt:  QRNRLTSLFLKAVQIHLLKTES

XP_022986816.1 ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic isoform X10 [Cucurbita maxima]1.2e-4463.31Show/hide
Query:  DFFGALRARVYDDEVRKWAAGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAALGDANEDVLQFQ---------
        DFFGALRARVYD+EVRKWAAGVGVE IGK+LVNSKEGPPTF+QPKMTLEKLLEYGNMLI EQENVKRVKLA+KYLKEAALGDANEDV+QF+         
Subjt:  DFFGALRARVYDDEVRKWAAGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAALGDANEDVLQFQ---------

Query:  --------------------------------------TSLDSMGKEQRNRLTSLFLKAVQIHLLKTES
                                              TS +SMG+E+RN+L SLFLKAVQIHLLKT S
Subjt:  --------------------------------------TSLDSMGKEQRNRLTSLFLKAVQIHLLKTES

XP_023007005.1 ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic-like [Cucurbita maxima]2.0e-5797.54Show/hide
Query:  DFFGALRARVYDDEVRKWAAGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAALGDANEDVLQFQTSLDSMGKE
        DFFGALRARVYDDEVRKWAAGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENV RVKLAEKYLKEAALGDANEDV QFQTSLDSMG+E
Subjt:  DFFGALRARVYDDEVRKWAAGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAALGDANEDVLQFQTSLDSMGKE

Query:  QRNRLTSLFLKAVQIHLLKTES
        QRNRLTSLFLKAVQIHLLKTES
Subjt:  QRNRLTSLFLKAVQIHLLKTES

XP_023532228.1 ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo]4.8e-59100Show/hide
Query:  DFFGALRARVYDDEVRKWAAGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAALGDANEDVLQFQTSLDSMGKE
        DFFGALRARVYDDEVRKWAAGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAALGDANEDVLQFQTSLDSMGKE
Subjt:  DFFGALRARVYDDEVRKWAAGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAALGDANEDVLQFQTSLDSMGKE

Query:  QRNRLTSLFLKAVQIHLLKTES
        QRNRLTSLFLKAVQIHLLKTES
Subjt:  QRNRLTSLFLKAVQIHLLKTES

TrEMBL top hitse value%identityAlignment
A0A6J1FWI3 ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic isoform X73.6e-4462.72Show/hide
Query:  DFFGALRARVYDDEVRKWAAGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAALGDANEDVLQFQ---------
        DFFGALRARVYD+EVRKWAAGVGVE IGK+LVNSKEGPPTF+QPKMTLEKLL YGNMLI EQENVKRVKLA+KYLKEAALGDANEDV+QF+         
Subjt:  DFFGALRARVYDDEVRKWAAGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAALGDANEDVLQFQ---------

Query:  --------------------------------------TSLDSMGKEQRNRLTSLFLKAVQIHLLKTES
                                              TS +SMG+E+RN+L SLFLKAVQIHLLKT S
Subjt:  --------------------------------------TSLDSMGKEQRNRLTSLFLKAVQIHLLKTES

A0A6J1G671 ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic-like2.3e-59100Show/hide
Query:  DFFGALRARVYDDEVRKWAAGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAALGDANEDVLQFQTSLDSMGKE
        DFFGALRARVYDDEVRKWAAGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAALGDANEDVLQFQTSLDSMGKE
Subjt:  DFFGALRARVYDDEVRKWAAGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAALGDANEDVLQFQTSLDSMGKE

Query:  QRNRLTSLFLKAVQIHLLKTES
        QRNRLTSLFLKAVQIHLLKTES
Subjt:  QRNRLTSLFLKAVQIHLLKTES

A0A6J1JCB9 ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic isoform X105.6e-4563.31Show/hide
Query:  DFFGALRARVYDDEVRKWAAGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAALGDANEDVLQFQ---------
        DFFGALRARVYD+EVRKWAAGVGVE IGK+LVNSKEGPPTF+QPKMTLEKLLEYGNMLI EQENVKRVKLA+KYLKEAALGDANEDV+QF+         
Subjt:  DFFGALRARVYDDEVRKWAAGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAALGDANEDVLQFQ---------

Query:  --------------------------------------TSLDSMGKEQRNRLTSLFLKAVQIHLLKTES
                                              TS +SMG+E+RN+L SLFLKAVQIHLLKT S
Subjt:  --------------------------------------TSLDSMGKEQRNRLTSLFLKAVQIHLLKTES

A0A6J1JH51 ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic isoform X96.8e-4357.22Show/hide
Query:  DFFGALRARVYDDEVRKWAAGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAALGDANEDVLQFQ---------
        DFFGALRARVYD+EVRKWAAGVGVE IGK+LVNSKEGPPTF+QPKMTLEKLLEYGNMLI EQENVKRVKLA+KYLKEAALGDANEDV+QF+         
Subjt:  DFFGALRARVYDDEVRKWAAGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAALGDANEDVLQFQ---------

Query:  --------------------------------------------------------TSLDSMGKEQRNRLTSLFLKAVQIHLLKTES
                                                                TS +SMG+E+RN+L SLFLKAVQIHLLKT S
Subjt:  --------------------------------------------------------TSLDSMGKEQRNRLTSLFLKAVQIHLLKTES

A0A6J1KXC6 ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic-like9.8e-5897.54Show/hide
Query:  DFFGALRARVYDDEVRKWAAGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAALGDANEDVLQFQTSLDSMGKE
        DFFGALRARVYDDEVRKWAAGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENV RVKLAEKYLKEAALGDANEDV QFQTSLDSMG+E
Subjt:  DFFGALRARVYDDEVRKWAAGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAALGDANEDVLQFQTSLDSMGKE

Query:  QRNRLTSLFLKAVQIHLLKTES
        QRNRLTSLFLKAVQIHLLKTES
Subjt:  QRNRLTSLFLKAVQIHLLKTES

SwissProt top hitse value%identityAlignment
O49074 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic2.3e-3579.55Show/hide
Query:  DFFGALRARVYDDEVRKWAAGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAALGDANEDVL
        DFFGALRARVYDDEVRKW +G G+E IG+ L+NS++GPPTF+QPKMTLEKLLEYGNML++EQENVKRV+LAE YLKEAALGDAN D +
Subjt:  DFFGALRARVYDDEVRKWAAGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAALGDANEDVL

O98997 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic7.8e-3679.78Show/hide
Query:  DFFGALRARVYDDEVRKWAAGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAALGDANEDVLQ
        DFFGALRARVYDDEVRKW +GVGV+  GK LVNSKEGPPTFDQPKM+L+KLL+YGNML++EQENVKRV+LA+KYL EAALG+ANED ++
Subjt:  DFFGALRARVYDDEVRKWAAGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAALGDANEDVLQ

Q40281 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic9.2e-3780.43Show/hide
Query:  DFFGALRARVYDDEVRKWAAGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAALGDANEDVLQFQT
        DFFGALRARVYDDEVRKW  GVGV+ IGK LVNSKEGPPTF+QPKMT+EKLLEYGNML++EQENVKRV+LA+KYL EAALGDAN D +   T
Subjt:  DFFGALRARVYDDEVRKWAAGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAALGDANEDVLQFQT

Q40460 Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic3.9e-3578.41Show/hide
Query:  DFFGALRARVYDDEVRKWAAGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAALGDANEDVL
        DFFGALRARVYDDEVRKW +G G+E+IG  L+NS +GPPTF+QPKMT+EKLLEYGNML++EQENVKRV+LA+KYLKEAALGDAN D +
Subjt:  DFFGALRARVYDDEVRKWAAGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAALGDANEDVL

Q7X999 Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic2.3e-3577.53Show/hide
Query:  DFFGALRARVYDDEVRKWAAGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAALGDANEDVLQ
        DFFGALRARVYDDEVRKW + VGV+ IGK LVNSKEGPPTF+QPKMT++KLL+YGNML++EQENVKRV+LA+KY+ EAALGDAN+D ++
Subjt:  DFFGALRARVYDDEVRKWAAGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAALGDANEDVLQ

Arabidopsis top hitse value%identityAlignment
AT1G73110.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein2.6e-1042.53Show/hide
Query:  RFGTVFADFFGALRARVYDDEVRKWA--AGVGVERIGKSLVNSK--EGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLK
        +F     DF+GALR+R YD  + KW   AG G+E +GK L+  K  +  P F  P+ T+E LLE G  LI EQ+ +   KL+++Y+K
Subjt:  RFGTVFADFFGALRARVYDDEVRKWA--AGVGVERIGKSLVNSK--EGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLK

AT2G39730.1 rubisco activase3.7e-3375Show/hide
Query:  DFFGALRARVYDDEVRKWAAGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAALGDANEDVL
        DFFGALRARVYDDEVRK+   +GVE+IGK LVNS+EGPP F+QP+MT EKL+EYGNML+ EQENVKRV+LAE YL +AALGDAN D +
Subjt:  DFFGALRARVYDDEVRKWAAGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAALGDANEDVL

AT2G39730.2 rubisco activase3.7e-3375Show/hide
Query:  DFFGALRARVYDDEVRKWAAGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAALGDANEDVL
        DFFGALRARVYDDEVRK+   +GVE+IGK LVNS+EGPP F+QP+MT EKL+EYGNML+ EQENVKRV+LAE YL +AALGDAN D +
Subjt:  DFFGALRARVYDDEVRKWAAGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAALGDANEDVL

AT2G39730.3 rubisco activase3.7e-3375Show/hide
Query:  DFFGALRARVYDDEVRKWAAGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAALGDANEDVL
        DFFGALRARVYDDEVRK+   +GVE+IGK LVNS+EGPP F+QP+MT EKL+EYGNML+ EQENVKRV+LAE YL +AALGDAN D +
Subjt:  DFFGALRARVYDDEVRKWAAGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAALGDANEDVL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCTTCTTTTACAGACGTGTAGCATCATTTAGAAGGTTTGGAACTGTTTTTGCAGACTTCTTTGGTGCTTTGAGAGCTCGAGTTTATGATGACGAAGTTAGAAAGTG
GGCTGCCGGCGTTGGGGTTGAGAGAATCGGAAAAAGTCTTGTTAACTCAAAGGAAGGTCCGCCAACTTTTGATCAACCAAAAATGACACTCGAAAAGCTTCTCGAATATG
GCAACATGCTCATCAAGGAACAGGAGAATGTGAAGAGAGTTAAACTGGCTGAGAAGTATTTGAAAGAAGCTGCTCTTGGAGATGCAAATGAGGATGTTCTTCAGTTTCAA
ACTTCTCTGGATTCAATGGGGAAAGAGCAACGCAACAGGTTAACATCACTGTTCCTGAAGGCTGTGCAGATTCATCTGCTAAAAACTGAGTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGATCTTCTTTTACAGACGTGTAGCATCATTTAGAAGGTTTGGAACTGTTTTTGCAGACTTCTTTGGTGCTTTGAGAGCTCGAGTTTATGATGACGAAGTTAGAAAGTG
GGCTGCCGGCGTTGGGGTTGAGAGAATCGGAAAAAGTCTTGTTAACTCAAAGGAAGGTCCGCCAACTTTTGATCAACCAAAAATGACACTCGAAAAGCTTCTCGAATATG
GCAACATGCTCATCAAGGAACAGGAGAATGTGAAGAGAGTTAAACTGGCTGAGAAGTATTTGAAAGAAGCTGCTCTTGGAGATGCAAATGAGGATGTTCTTCAGTTTCAA
ACTTCTCTGGATTCAATGGGGAAAGAGCAACGCAACAGGTTAACATCACTGTTCCTGAAGGCTGTGCAGATTCATCTGCTAAAAACTGAGTCCTAA
Protein sequenceShow/hide protein sequence
MIFFYRRVASFRRFGTVFADFFGALRARVYDDEVRKWAAGVGVERIGKSLVNSKEGPPTFDQPKMTLEKLLEYGNMLIKEQENVKRVKLAEKYLKEAALGDANEDVLQFQ
TSLDSMGKEQRNRLTSLFLKAVQIHLLKTES