CuGenDBv2

Gene ID	CmoCh02G007870
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Transmembrane protein
Genome location	Cmo_Chr02:4863288..4864112
RNA-Seq Expression	CmoCh02G007870
Synteny	CmoCh02G007870
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6605444.1 hypothetical protein SDJN03_02761, partial [Cucurbita argyrosperma subsp. sororia]

1.6e-68

83.5

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Query:  MATTTSTSLSLPIFLSSSNPNSYKLPSLRSSSASFASSFNLSRRPAALVLIQNRPRRGSIRRLHAVSEETLASESAALVEKSQEIASTGDDGVSTIISVL
        MATTTSTSLSLPIFLSSSNPNSYKLPS RSSSASFASSFNLSRRPAALVLIQNRPRRGSIRRLHAVSEETLASESAALVEKSQEIASTGDDGVSTIISVL
Subjt:  MATTTSTSLSLPIFLSSSNPNSYKLPSLRSSSASFASSFNLSRRPAALVLIQNRPRRGSIRRLHAVSEETLASESAALVEKSQEIASTGDDGVSTIISVL

Query:  LFVAFVGLSVLTIGVKSVLGFEFRMNNFVRIAVDFIGLVRVFTLGSVIYIAVTDFLQKREKEKFEKEEAANKKSGKKKKVKVKAKAGPRGFGQKVEQEED
        LFVAFVGLSVLTIG                                VIYIAVTDFLQKREKEKFEKEEAANKKSGKKKKVKVKAKAGPRGFGQKVEQEED
Subjt:  LFVAFVGLSVLTIGVKSVLGFEFRMNNFVRIAVDFIGLVRVFTLGSVIYIAVTDFLQKREKEKFEKEEAANKKSGKKKKVKVKAKAGPRGFGQKVEQEED

XP_022947295.1 uncharacterized protein LOC111451198 [Cucurbita moschata]

3.3e-69

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Query:  MATTTSTSLSLPIFLSSSNPNSYKLPSLRSSSASFASSFNLSRRPAALVLIQNRPRRGSIRRLHAVSEETLASESAALVEKSQEIASTGDDGVSTIISVL
        MATTTSTSLSLPIFLSSSNPNSYKLPSLRSSSASFASSFNLSRRPAALVLIQNRPRRGSIRRLHAVSEETLASESAALVEKSQEIASTGDDGVSTIISVL
Subjt:  MATTTSTSLSLPIFLSSSNPNSYKLPSLRSSSASFASSFNLSRRPAALVLIQNRPRRGSIRRLHAVSEETLASESAALVEKSQEIASTGDDGVSTIISVL

Query:  LFVAFVGLSVLTIGVKSVLGFEFRMNNFVRIAVDFIGLVRVFTLGSVIYIAVTDFLQKREKEKFEKEEAANKKSGKKKKVKVKAKAGPRGFGQKVEQEED
        LFVAFVGLSVLTIG                                VIYIAVTDFLQKREKEKFEKEEAANKKSGKKKKVKVKAKAGPRGFGQKVEQEED
Subjt:  LFVAFVGLSVLTIGVKSVLGFEFRMNNFVRIAVDFIGLVRVFTLGSVIYIAVTDFLQKREKEKFEKEEAANKKSGKKKKVKVKAKAGPRGFGQKVEQEED

XP_023007015.1 uncharacterized protein LOC111499635 [Cucurbita maxima]

1.8e-67

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Query:  MATTTSTSLSLPIFLSSSNPNSYKLPSLRSSSASFASSFNLSRRPAALVLIQNRPRRGSIRRLHAVSEETLASESAALVEKSQEIASTGDDGVSTIISVL
        MATTTSTSLSLPI LSSSNPNSYKLPSLRSSSASFASSFNLSRRPAALVL+QNRPRRGSIRRLHA+SEETLASESAALVEKSQEIASTGDDGVSTIISVL
Subjt:  MATTTSTSLSLPIFLSSSNPNSYKLPSLRSSSASFASSFNLSRRPAALVLIQNRPRRGSIRRLHAVSEETLASESAALVEKSQEIASTGDDGVSTIISVL

Query:  LFVAFVGLSVLTIGVKSVLGFEFRMNNFVRIAVDFIGLVRVFTLGSVIYIAVTDFLQKREKEKFEKEEAANKKSGKKKKVKVKAKAGPRGFGQKVEQEED
        LFVAFVGLSVLTIG                                VIYIAVTDFLQKREKEKFEKEEAANKKSGKKKKVKVKAK GPRGFGQKVEQEED
Subjt:  LFVAFVGLSVLTIGVKSVLGFEFRMNNFVRIAVDFIGLVRVFTLGSVIYIAVTDFLQKREKEKFEKEEAANKKSGKKKKVKVKAKAGPRGFGQKVEQEED

XP_023532311.1 uncharacterized protein LOC111794502 [Cucurbita pepo subsp. pepo]

3.4e-66

80.5

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Query:  MATTTSTSLSLPIFLSSSNPNSYKLPSLRSSSASFASSFNLSRRPAALVLIQNRPRRGSIRRLHAVSEETLASESAALVEKSQEIASTGDDGVSTIISVL
        MATTTSTSLSLPIFLSSSNPNSYKLPSLRSSSASFASS NLSRRP ALVLIQNR RRGSIRRLHA+SEETLASESAALVEKSQEIASTGDDGVSTIISVL
Subjt:  MATTTSTSLSLPIFLSSSNPNSYKLPSLRSSSASFASSFNLSRRPAALVLIQNRPRRGSIRRLHAVSEETLASESAALVEKSQEIASTGDDGVSTIISVL

Query:  LFVAFVGLSVLTIGVKSVLGFEFRMNNFVRIAVDFIGLVRVFTLGSVIYIAVTDFLQKREKEKFEKEEAANKKSGKKKKVKVKAKAGPRGFGQKVEQEED
        LFVAF+GLSVLTIG                                VIYIAVTDFLQKREKEKFEKEEAANKKSGKKK+VKVKA+AGPRGFGQKVEQEED
Subjt:  LFVAFVGLSVLTIGVKSVLGFEFRMNNFVRIAVDFIGLVRVFTLGSVIYIAVTDFLQKREKEKFEKEEAANKKSGKKKKVKVKAKAGPRGFGQKVEQEED

XP_038901778.1 uncharacterized protein LOC120088501 [Benincasa hispida]

2.4e-43

64.88

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Query:  MATTTSTSLSLPIFLSSSNPNSYK-LPSLR-SSSASFASSFNLSRRPAALV---LIQNRPRRGSIRRLHAVSEETLASESAALVEKSQEIASTGDDGVST
        MA+T ST LSLPIFLSS NPNS K LP+LR SSS +F SS   SRR   L+   L QNR +  SIRRLHA SE+TLAS+SAALVEKSQEI ST DDGVST
Subjt:  MATTTSTSLSLPIFLSSSNPNSYK-LPSLR-SSSASFASSFNLSRRPAALV---LIQNRPRRGSIRRLHAVSEETLASESAALVEKSQEIASTGDDGVST

Query:  IISVLLFVAFVGLSVLTIGVKSVLGFEFRMNNFVRIAVDFIGLVRVFTLGSVIYIAVTDFLQKREKEKFEKEEAANKKSGKKKKVKVKAKAGPRGFGQKV
        IISVLLFVAF+GLS+LTIG                                VIYIAVTDFLQKREKEKFEKEEA  KKSGKKK  KVKAK GPRGFGQKV
Subjt:  IISVLLFVAFVGLSVLTIGVKSVLGFEFRMNNFVRIAVDFIGLVRVFTLGSVIYIAVTDFLQKREKEKFEKEEAANKKSGKKKKVKVKAKAGPRGFGQKV

Query:  EQEED
        E+EE+
Subjt:  EQEED

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CM77 uncharacterized protein LOC103502067

3.5e-32

57.97

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Query:  MATTTSTSLSLPIFLSSSNPNSYKLPSLRSSSA-SFASSFNLSRRPAALV---LIQNRPRRGSIRRLH-AVSEETLASESAALV-EKSQEI-ASTGDDGV
        MA+TTS SLSLPI LSSSN     LP+LRSSS+  F SS  LS RP   +   L QNR ++ S   +H A SE+TLAS+SAALV EKSQ+I  ST DDGV
Subjt:  MATTTSTSLSLPIFLSSSNPNSYKLPSLRSSSA-SFASSFNLSRRPAALV---LIQNRPRRGSIRRLH-AVSEETLASESAALV-EKSQEI-ASTGDDGV

Query:  STIISVLLFVAFVGLSVLTIGVKSVLGFEFRMNNFVRIAVDFIGLVRVFTLGSVIYIAVTDFLQKREKEKFEKEEAANKKSGKKKKVKVKAKAGPRGFGQ
        STIISVLLF+AF+GLS+LTIG                                VIYI VTDFLQKREKEKFEKEEA  KK   KKK KV+A+ GPRGFGQ
Subjt:  STIISVLLFVAFVGLSVLTIGVKSVLGFEFRMNNFVRIAVDFIGLVRVFTLGSVIYIAVTDFLQKREKEKFEKEEAANKKSGKKKKVKVKAKAGPRGFGQ

Query:  KVEQEED
        KVE+EED
Subjt:  KVEQEED

A0A5A7V864 Uncharacterized protein

3.5e-32

57.97

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Query:  MATTTSTSLSLPIFLSSSNPNSYKLPSLRSSSA-SFASSFNLSRRPAALV---LIQNRPRRGSIRRLH-AVSEETLASESAALV-EKSQEI-ASTGDDGV
        MA+TTS SLSLPI LSSSN     LP+LRSSS+  F SS  LS RP   +   L QNR ++ S   +H A SE+TLAS+SAALV EKSQ+I  ST DDGV
Subjt:  MATTTSTSLSLPIFLSSSNPNSYKLPSLRSSSA-SFASSFNLSRRPAALV---LIQNRPRRGSIRRLH-AVSEETLASESAALV-EKSQEI-ASTGDDGV

Query:  STIISVLLFVAFVGLSVLTIGVKSVLGFEFRMNNFVRIAVDFIGLVRVFTLGSVIYIAVTDFLQKREKEKFEKEEAANKKSGKKKKVKVKAKAGPRGFGQ
        STIISVLLF+AF+GLS+LTIG                                VIYI VTDFLQKREKEKFEKEEA  KK   KKK KV+A+ GPRGFGQ
Subjt:  STIISVLLFVAFVGLSVLTIGVKSVLGFEFRMNNFVRIAVDFIGLVRVFTLGSVIYIAVTDFLQKREKEKFEKEEAANKKSGKKKKVKVKAKAGPRGFGQ

Query:  KVEQEED
        KVE+EED
Subjt:  KVEQEED

A0A6J1D484 uncharacterized protein LOC111017113

4.1e-41

63.05

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Query:  MATTTSTSLSLPIFLSSSNPNSYKLPSLRSSSASFASSFNLSRRPAALV---LIQNRPRRGSIRRLHAVSEETLASESAALVEKSQEIASTGDDGVSTII
        MATT STSLSLPIFLS+ NP  ++   LRSSS        LSRRPA LV   L QN  R  SIRRLHA SE+TLASESAALVEKSQEI S+GDDGVSTII
Subjt:  MATTTSTSLSLPIFLSSSNPNSYKLPSLRSSSASFASSFNLSRRPAALV---LIQNRPRRGSIRRLHAVSEETLASESAALVEKSQEIASTGDDGVSTII

Query:  SVLLFVAFVGLSVLTIGVKSVLGFEFRMNNFVRIAVDFIGLVRVFTLGSVIYIAVTDFLQKREKEKFEK-EEAANKKSGKKKKVKVKAKAGPRGFGQKVE
        S LLFVAF+GLS+LTIG                                VIYIAVTDFLQKREKEKFEK E A NKKSGKKK  KV+A+AGPRGFGQK+E
Subjt:  SVLLFVAFVGLSVLTIGVKSVLGFEFRMNNFVRIAVDFIGLVRVFTLGSVIYIAVTDFLQKREKEKFEK-EEAANKKSGKKKKVKVKAKAGPRGFGQKVE

Query:  QEE
        +EE
Subjt:  QEE

A0A6J1G6G9 uncharacterized protein LOC111451198

1.6e-69

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Query:  MATTTSTSLSLPIFLSSSNPNSYKLPSLRSSSASFASSFNLSRRPAALVLIQNRPRRGSIRRLHAVSEETLASESAALVEKSQEIASTGDDGVSTIISVL
        MATTTSTSLSLPIFLSSSNPNSYKLPSLRSSSASFASSFNLSRRPAALVLIQNRPRRGSIRRLHAVSEETLASESAALVEKSQEIASTGDDGVSTIISVL
Subjt:  MATTTSTSLSLPIFLSSSNPNSYKLPSLRSSSASFASSFNLSRRPAALVLIQNRPRRGSIRRLHAVSEETLASESAALVEKSQEIASTGDDGVSTIISVL

Query:  LFVAFVGLSVLTIGVKSVLGFEFRMNNFVRIAVDFIGLVRVFTLGSVIYIAVTDFLQKREKEKFEKEEAANKKSGKKKKVKVKAKAGPRGFGQKVEQEED
        LFVAFVGLSVLTIG                                VIYIAVTDFLQKREKEKFEKEEAANKKSGKKKKVKVKAKAGPRGFGQKVEQEED
Subjt:  LFVAFVGLSVLTIGVKSVLGFEFRMNNFVRIAVDFIGLVRVFTLGSVIYIAVTDFLQKREKEKFEKEEAANKKSGKKKKVKVKAKAGPRGFGQKVEQEED

A0A6J1L1T3 uncharacterized protein LOC111499635

8.7e-68

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Query:  MATTTSTSLSLPIFLSSSNPNSYKLPSLRSSSASFASSFNLSRRPAALVLIQNRPRRGSIRRLHAVSEETLASESAALVEKSQEIASTGDDGVSTIISVL
        MATTTSTSLSLPI LSSSNPNSYKLPSLRSSSASFASSFNLSRRPAALVL+QNRPRRGSIRRLHA+SEETLASESAALVEKSQEIASTGDDGVSTIISVL
Subjt:  MATTTSTSLSLPIFLSSSNPNSYKLPSLRSSSASFASSFNLSRRPAALVLIQNRPRRGSIRRLHAVSEETLASESAALVEKSQEIASTGDDGVSTIISVL

Query:  LFVAFVGLSVLTIGVKSVLGFEFRMNNFVRIAVDFIGLVRVFTLGSVIYIAVTDFLQKREKEKFEKEEAANKKSGKKKKVKVKAKAGPRGFGQKVEQEED
        LFVAFVGLSVLTIG                                VIYIAVTDFLQKREKEKFEKEEAANKKSGKKKKVKVKAK GPRGFGQKVEQEED
Subjt:  LFVAFVGLSVLTIGVKSVLGFEFRMNNFVRIAVDFIGLVRVFTLGSVIYIAVTDFLQKREKEKFEKEEAANKKSGKKKKVKVKAKAGPRGFGQKVEQEED

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G29180.1 unknown protein

6.5e-15

41.79

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Query:  VSEETLASESAALVEKSQEIASTGDDGVSTIISVLLFVAFVGLSVLTIGVKSVLGFEFRMNNFVRIAVDFIGLVRVFTLGSVIYIAVTDFLQKREKEKFE
        +S+E ++S+S++       ++S G DGV+ II VLLFVAF+ L+VLTIG                                V+YI VT+FL KRE+EKFE
Subjt:  VSEETLASESAALVEKSQEIASTGDDGVSTIISVLLFVAFVGLSVLTIGVKSVLGFEFRMNNFVRIAVDFIGLVRVFTLGSVIYIAVTDFLQKREKEKFE

Query:  KEEAANKKSGKKKKVKVKAKAGPRGFGQKVEQEE
        K+EAA K     KK  ++A+AGPRGFGQK+E ++
Subjt:  KEEAANKKSGKKKKVKVKAKAGPRGFGQKVEQEE

Sequences

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CDS sequence

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ATGGCTACCACCACATCCACTTCCCTATCGCTACCGATTTTCCTCTCCTCTTCCAATCCAAACTCCTACAAGCTTCCTTCTCTTCGTTCCTCATCTGCATCCTTTGCTTC
ATCCTTCAATCTCTCTCGCCGACCGGCAGCTCTCGTTCTCATCCAAAATCGTCCAAGACGAGGCTCAATCCGTAGGCTCCATGCCGTTTCTGAAGAAACCTTGGCCTCGG
AATCCGCCGCGCTGGTGGAGAAATCACAGGAGATAGCATCGACTGGTGACGACGGCGTATCCACCATAATCTCTGTTCTTCTGTTTGTCGCTTTCGTCGGTCTATCTGTT
CTCACAATCGGGGTAAAATCAGTGCTCGGATTCGAATTTCGAATGAATAATTTTGTTCGAATAGCTGTTGATTTTATCGGATTGGTTAGGGTTTTTACATTGGGAAGTGT
AATCTACATTGCTGTGACGGATTTCTTGCAGAAGAGGGAGAAGGAAAAGTTTGAGAAAGAGGAGGCGGCTAACAAGAAGAGCGGAAAGAAGAAGAAGGTGAAGGTTAAGG
CCAAAGCTGGACCCAGGGGATTCGGTCAGAAGGTCGAACAAGAAGAGGATTGA

mRNA sequence

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Protein sequence

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MATTTSTSLSLPIFLSSSNPNSYKLPSLRSSSASFASSFNLSRRPAALVLIQNRPRRGSIRRLHAVSEETLASESAALVEKSQEIASTGDDGVSTIISVLLFVAFVGLSV
LTIGVKSVLGFEFRMNNFVRIAVDFIGLVRVFTLGSVIYIAVTDFLQKREKEKFEKEEAANKKSGKKKKVKVKAKAGPRGFGQKVEQEED

CmoCh02G007870 (gene) of Cucurbita moschata (Rifu) v1 genome