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CmoCh02G008120 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G008120
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationCmo_Chr02:4981426..4982280
RNA-Seq ExpressionCmoCh02G008120
SyntenyCmoCh02G008120
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605467.1 U-box domain-containing protein 13, partial [Cucurbita argyrosperma subsp. sororia]4.4e-1080.85Show/hide
Query:  MWDMNQANDTVTALASLKEALDSTKELLRLGSEGSKNVWCVYSIPLF
        MWDMNQANDTV ALASLKEALDSTKELLRLGSEGSKN     S+ +F
Subjt:  MWDMNQANDTVTALASLKEALDSTKELLRLGSEGSKNVWCVYSIPLF
KAG7035412.1 U-box domain-containing protein 13, partial [Cucurbita argyrosperma subsp. argyrosperma]4.4e-1080.85Show/hide
Query:  MWDMNQANDTVTALASLKEALDSTKELLRLGSEGSKNVWCVYSIPLF
        MWDMNQANDTV ALASLKEALDSTKELLRLGSEGSKN     S+ +F
Subjt:  MWDMNQANDTVTALASLKEALDSTKELLRLGSEGSKNVWCVYSIPLF
XP_023532328.1 U-box domain-containing protein 13-like isoform X1 [Cucurbita pepo subsp. pepo]2.2e-0689.19Show/hide
Query:  MWDMNQA--NDTVTALASLKEALDSTKELLRLGSEGS
        MWDMNQA  NDTV ALASLKEALDS KELLRLGSEGS
Subjt:  MWDMNQA--NDTVTALASLKEALDSTKELLRLGSEGS
XP_023532329.1 U-box domain-containing protein 13-like isoform X2 [Cucurbita pepo subsp. pepo]2.2e-0689.19Show/hide
Query:  MWDMNQA--NDTVTALASLKEALDSTKELLRLGSEGS
        MWDMNQA  NDTV ALASLKEALDS KELLRLGSEGS
Subjt:  MWDMNQA--NDTVTALASLKEALDSTKELLRLGSEGS
TrEMBL top hitse value%identityAlignment
A0A6J1D426 RING-type E3 ubiquitin transferase8.6e-0490Show/hide
Query:  ANDTVTALASLKEALDSTKELLRLGSEGSK
        A+ TVTALASLKEAL+STKELLRLGSEGSK
Subjt:  ANDTVTALASLKEALDSTKELLRLGSEGSK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGGATATGAATCAGGCGAATGATACTGTGACAGCTCTCGCGTCGTTGAAGGAAGCTCTGGATTCGACCAAGGAGTTGCTGAGACTTGGGAGCGAGGGGAGCAAGAA
TGTCTGGTGCGTTTACTCCATTCCATTGTTTGTGTGCTATCTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGGGATATGAATCAGGCGAATGATACTGTGACAGCTCTCGCGTCGTTGAAGGAAGCTCTGGATTCGACCAAGGAGTTGCTGAGACTTGGGAGCGAGGGGAGCAAGAA
TGTCTGGTGCGTTTACTCCATTCCATTGTTTGTGTGCTATCTGTAGCCTACTTTCACTTCCATTTGTATCGGCAACAAAACATTTTGCTTAGGCTATAAACAATGTTTCG
ATGGACATCTTCCGGTTCAACCACACTTTGCTGATGCCTTCAATTCGATTAGACGACATTTTACTCGTATGTACCCTCAACTTGGAATTTTGGCCTTGGAGAAAGAGCAA
AATTTGAATCAATTTCACAGGATGACAGCAAGACTAGAGAAAGCTCTGAATGAAATTTCACATGAAGATCTTGATATATCTGATGAAGTTTAG
Protein sequenceShow/hide protein sequence
MWDMNQANDTVTALASLKEALDSTKELLRLGSEGSKNVWCVYSIPLFVCYL