; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh02G008210 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G008210
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionhistone H4
Genome locationCmo_Chr02:5007542..5009107
RNA-Seq ExpressionCmoCh02G008210
SyntenyCmoCh02G008210
Gene Ontology termsGO:0006334 - nucleosome assembly (biological process)
GO:0006352 - DNA-templated transcription, initiation (biological process)
GO:0009765 - photosynthesis, light harvesting (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0046982 - protein heterodimerization activity (molecular function)
GO:0016168 - chlorophyll binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR035425 - CENP-T/Histone H4, histone fold
IPR019809 - Histone H4, conserved site
IPR009072 - Histone-fold
IPR001951 - Histone H4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5802138.1 putative histone H4, histone-fold, CENP-T/Histone H4, histone [Helianthus annuus]1.1e-4981.48Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FGVIEISVSLSLKLFIAVHRSSGNEILVRCVIIVC
        FGV+ +  S+S  LF   + S+G ++    ++  C
Subjt:  FGVIEISVSLSLKLFIAVHRSSGNEILVRCVIIVC

KAG2371361.1 Histone H4 variant [Vigna angularis]3.1e-4994.74Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FGVIEISVSLSLKL
        FGV  ISV  SL +
Subjt:  FGVIEISVSLSLKL

KAG4923664.1 hypothetical protein JHK87_049204 [Glycine soja]1.8e-4997.25Show/hide
Query:  LQSSVEKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKR
        L +S+EKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKR
Subjt:  LQSSVEKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKR

Query:  QGRTLYGFG
        QGRTLYGFG
Subjt:  QGRTLYGFG

RDX58608.1 hypothetical protein CR513_62063, partial [Mucuna pruriens]1.1e-4998.15Show/hide
Query:  VEKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT
        VEKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT
Subjt:  VEKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT

Query:  LYGFGVIE
        LYGFG +E
Subjt:  LYGFGVIE

XP_016507811.1 PREDICTED: uncharacterized protein LOC107825453 [Nicotiana tabacum]4.1e-4995.54Show/hide
Query:  HFALQSSVEKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYA
        HF  Q+S  KMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYA
Subjt:  HFALQSSVEKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYA

Query:  LKRQGRTLYGFG
        LKRQGRTLYGFG
Subjt:  LKRQGRTLYGFG

TrEMBL top hitse value%identityAlignment
A0A1S4D357 Histone H42.0e-4995.54Show/hide
Query:  HFALQSSVEKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYA
        HF  Q+S  KMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYA
Subjt:  HFALQSSVEKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYA

Query:  LKRQGRTLYGFG
        LKRQGRTLYGFG
Subjt:  LKRQGRTLYGFG

A0A251VGT6 Histone H45.2e-5081.48Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FGVIEISVSLSLKLFIAVHRSSGNEILVRCVIIVC
        FGV+ +  S+S  LF   + S+G ++    ++  C
Subjt:  FGVIEISVSLSLKLFIAVHRSSGNEILVRCVIIVC

A0A371E1H0 Histone H4 (Fragment)5.2e-5098.15Show/hide
Query:  VEKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT
        VEKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT
Subjt:  VEKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT

Query:  LYGFGVIE
        LYGFG +E
Subjt:  LYGFGVIE

A0A453N2X0 Histone H41.5e-4992.98Show/hide
Query:  ILHFALQSSVEKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVV
        +LHF   S+   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVV
Subjt:  ILHFALQSSVEKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVV

Query:  YALKRQGRTLYGFG
        YALKRQGRTLYGFG
Subjt:  YALKRQGRTLYGFG

V7AI73 Histone H42.6e-4997.22Show/hide
Query:  QSSVEKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQ
        +  VEKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQ
Subjt:  QSSVEKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQ

Query:  GRTLYGFG
        GRTLYGFG
Subjt:  GRTLYGFG

SwissProt top hitse value%identityAlignment
P59259 Histone H45.0e-50100Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FG
        FG
Subjt:  FG

P62785 Histone H4 variant TH0115.0e-50100Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FG
        FG
Subjt:  FG

Q6LAF3 Histone H45.0e-50100Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FG
        FG
Subjt:  FG

Q6PMI5 Histone H45.0e-50100Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FG
        FG
Subjt:  FG

Q6WZ83 Histone H45.0e-50100Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FG
        FG
Subjt:  FG

Arabidopsis top hitse value%identityAlignment
AT1G07660.1 Histone superfamily protein3.5e-51100Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FG
        FG
Subjt:  FG

AT1G07820.1 Histone superfamily protein3.5e-51100Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FG
        FG
Subjt:  FG

AT1G07820.2 Histone superfamily protein3.5e-51100Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FG
        FG
Subjt:  FG

AT2G28740.1 histone H43.5e-51100Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FG
        FG
Subjt:  FG

AT3G45930.1 Histone superfamily protein3.5e-51100Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FG
        FG
Subjt:  FG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCTAGTTCTGCATTTTGCAGATAGGAAAATGCATGGTATTCTTCATTTCGCTCTTCAATCTTCAGTCGAAAAGATGTCTGGACGTGGAAAGGGAGGCAAGGGATT
GGGAAAGGGAGGAGCAAAGCGTCACAGAAAGGTACTCAGAGATAACATTCAGGGCATTACCAAGCCTGCAATTCGCCGTTTGGCTCGTAGAGGAGGTGTCAAGCGTATCA
GTGGATTGATCTATGAAGAAACCAGAGGTGTTTTGAAGATCTTCTTGGAGAATGTGATTCGCGATGCTGTGACCTACACCGAGCACGCCAGGAGGAAGACGGTGACCGCC
ATGGATGTGGTCTATGCCTTGAAAAGGCAAGGAAGAACTCTGTATGGCTTTGGAGTCATTGAGATTTCTGTTAGTCTTTCTCTGAAGCTGTTCATCGCTGTTCATCGTAG
TTCTGGCAATGAAATTCTAGTTCGTTGTGTGATTATTGTCTGTCCACTAAAACTATGA
mRNA sequenceShow/hide mRNA sequence
ATGATGCTAGTTCTGCATTTTGCAGATAGGAAAATGCATGGTATTCTTCATTTCGCTCTTCAATCTTCAGTCGAAAAGATGTCTGGACGTGGAAAGGGAGGCAAGGGATT
GGGAAAGGGAGGAGCAAAGCGTCACAGAAAGGTACTCAGAGATAACATTCAGGGCATTACCAAGCCTGCAATTCGCCGTTTGGCTCGTAGAGGAGGTGTCAAGCGTATCA
GTGGATTGATCTATGAAGAAACCAGAGGTGTTTTGAAGATCTTCTTGGAGAATGTGATTCGCGATGCTGTGACCTACACCGAGCACGCCAGGAGGAAGACGGTGACCGCC
ATGGATGTGGTCTATGCCTTGAAAAGGCAAGGAAGAACTCTGTATGGCTTTGGAGTCATTGAGATTTCTGTTAGTCTTTCTCTGAAGCTGTTCATCGCTGTTCATCGTAG
TTCTGGCAATGAAATTCTAGTTCGTTGTGTGATTATTGTCTGTCCACTAAAACTATGA
Protein sequenceShow/hide protein sequence
MMLVLHFADRKMHGILHFALQSSVEKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTA
MDVVYALKRQGRTLYGFGVIEISVSLSLKLFIAVHRSSGNEILVRCVIIVCPLKL