CuGenDBv2

Gene ID	CmoCh02G008580
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	ethylene-responsive transcription factor RAP2-7-like isoform X1
Genome location	Cmo_Chr02:5220052..5223139
RNA-Seq Expression	CmoCh02G008580
Synteny	CmoCh02G008580
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0005634 - nucleus (cellular component) GO:0003677 - DNA binding (molecular function) GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6605510.1 Ethylene-responsive transcription factor RAP2-7, partial [Cucurbita argyrosperma subsp. sororia]

1.7e-62

99.18

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Query:  MESNARAAVGDPPVNGLVMTSEHAPLWNGTQSSFFPSEESMTEKRLALGSSQGVPNWAWQIHGPINAAQMPLFSTAASSGFSFSATHFPAAMPPPHQPSS
        MESNARAAVGDPPVNGLVMTSEHAPLWNGTQSSFFPSEESMTEKRLALGSSQGVPNWAWQIHGPINAAQMPLFSTAASSGFSFSATHFPAAMPPPHQPSS
Subjt:  MESNARAAVGDPPVNGLVMTSEHAPLWNGTQSSFFPSEESMTEKRLALGSSQGVPNWAWQIHGPINAAQMPLFSTAASSGFSFSATHFPAAMPPPHQPSS

Query:  IAQNIHFNSPKASLNSAQYHHL
        IAQNIHFNSPKASLNS QYHHL
Subjt:  IAQNIHFNSPKASLNSAQYHHL

XP_022948215.1 ethylene-responsive transcription factor RAP2-7-like isoform X1 [Cucurbita moschata]

4.5e-63

100

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Query:  MESNARAAVGDPPVNGLVMTSEHAPLWNGTQSSFFPSEESMTEKRLALGSSQGVPNWAWQIHGPINAAQMPLFSTAASSGFSFSATHFPAAMPPPHQPSS
        MESNARAAVGDPPVNGLVMTSEHAPLWNGTQSSFFPSEESMTEKRLALGSSQGVPNWAWQIHGPINAAQMPLFSTAASSGFSFSATHFPAAMPPPHQPSS
Subjt:  MESNARAAVGDPPVNGLVMTSEHAPLWNGTQSSFFPSEESMTEKRLALGSSQGVPNWAWQIHGPINAAQMPLFSTAASSGFSFSATHFPAAMPPPHQPSS

Query:  IAQNIHFNSPKASLNSAQYHHL
        IAQNIHFNSPKASLNSAQYHHL
Subjt:  IAQNIHFNSPKASLNSAQYHHL

XP_022948216.1 ethylene-responsive transcription factor RAP2-7-like isoform X2 [Cucurbita moschata]

4.5e-63

100

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Query:  MESNARAAVGDPPVNGLVMTSEHAPLWNGTQSSFFPSEESMTEKRLALGSSQGVPNWAWQIHGPINAAQMPLFSTAASSGFSFSATHFPAAMPPPHQPSS
        MESNARAAVGDPPVNGLVMTSEHAPLWNGTQSSFFPSEESMTEKRLALGSSQGVPNWAWQIHGPINAAQMPLFSTAASSGFSFSATHFPAAMPPPHQPSS
Subjt:  MESNARAAVGDPPVNGLVMTSEHAPLWNGTQSSFFPSEESMTEKRLALGSSQGVPNWAWQIHGPINAAQMPLFSTAASSGFSFSATHFPAAMPPPHQPSS

Query:  IAQNIHFNSPKASLNSAQYHHL
        IAQNIHFNSPKASLNSAQYHHL
Subjt:  IAQNIHFNSPKASLNSAQYHHL

XP_023532216.1 ethylene-responsive transcription factor RAP2-7-like isoform X1 [Cucurbita pepo subsp. pepo]

1.4e-61

98.36

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Query:  MESNARAAVGDPPVNGLVMTSEHAPLWNGTQSSFFPSEESMTEKRLALGSSQGVPNWAWQIHGPINAAQMPLFSTAASSGFSFSATHFPAAMPPPHQPSS
        MESNARAAVGDPPVNGLVMTSEHAPLWNGTQSSFFPSEESMTEKRLALGSSQGVPNWAWQIHGPINAAQMPLFSTAASSGFSFSATHFPAAMPPPHQPSS
Subjt:  MESNARAAVGDPPVNGLVMTSEHAPLWNGTQSSFFPSEESMTEKRLALGSSQGVPNWAWQIHGPINAAQMPLFSTAASSGFSFSATHFPAAMPPPHQPSS

Query:  IAQNIHFNSPKASLNSAQYHHL
        IAQNIHFNS KASLNS QYHHL
Subjt:  IAQNIHFNSPKASLNSAQYHHL

XP_023532217.1 ethylene-responsive transcription factor RAP2-7-like isoform X2 [Cucurbita pepo subsp. pepo]

1.4e-61

98.36

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Query:  MESNARAAVGDPPVNGLVMTSEHAPLWNGTQSSFFPSEESMTEKRLALGSSQGVPNWAWQIHGPINAAQMPLFSTAASSGFSFSATHFPAAMPPPHQPSS
        MESNARAAVGDPPVNGLVMTSEHAPLWNGTQSSFFPSEESMTEKRLALGSSQGVPNWAWQIHGPINAAQMPLFSTAASSGFSFSATHFPAAMPPPHQPSS
Subjt:  MESNARAAVGDPPVNGLVMTSEHAPLWNGTQSSFFPSEESMTEKRLALGSSQGVPNWAWQIHGPINAAQMPLFSTAASSGFSFSATHFPAAMPPPHQPSS

Query:  IAQNIHFNSPKASLNSAQYHHL
        IAQNIHFNS KASLNS QYHHL
Subjt:  IAQNIHFNSPKASLNSAQYHHL

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CY06 ethylene-responsive transcription factor RAP2-7-like isoform X1

1.8e-46

77.69

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Query:  MESNARAAVGDPPVNGLVMTSEHAPLWNGTQSSFFPSEESMTEKRLALGSSQGVPNWAWQIHGPINAAQMPLFSTAASSGFSFSATHFPAAMPPPHQPSS
        MESNA AAVGDPP  GLVMTSEHAPLWNG QSSFFP+EES+TEKRLALGSSQGVP+W WQIHG +NA Q+PLFS AASSGFSFSATH PAA+ PP QP  
Subjt:  MESNARAAVGDPPVNGLVMTSEHAPLWNGTQSSFFPSEESMTEKRLALGSSQGVPNWAWQIHGPINAAQMPLFSTAASSGFSFSATHFPAAMPPPHQPSS

Query:  IAQNIHFNSPKASLNSAQYHH
         A N+HF   KASLNS+QY H
Subjt:  IAQNIHFNSPKASLNSAQYHH

A0A6J1G8N2 ethylene-responsive transcription factor RAP2-7-like isoform X2

2.2e-63

100

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Query:  MESNARAAVGDPPVNGLVMTSEHAPLWNGTQSSFFPSEESMTEKRLALGSSQGVPNWAWQIHGPINAAQMPLFSTAASSGFSFSATHFPAAMPPPHQPSS
        MESNARAAVGDPPVNGLVMTSEHAPLWNGTQSSFFPSEESMTEKRLALGSSQGVPNWAWQIHGPINAAQMPLFSTAASSGFSFSATHFPAAMPPPHQPSS
Subjt:  MESNARAAVGDPPVNGLVMTSEHAPLWNGTQSSFFPSEESMTEKRLALGSSQGVPNWAWQIHGPINAAQMPLFSTAASSGFSFSATHFPAAMPPPHQPSS

Query:  IAQNIHFNSPKASLNSAQYHHL
        IAQNIHFNSPKASLNSAQYHHL
Subjt:  IAQNIHFNSPKASLNSAQYHHL

A0A6J1G967 ethylene-responsive transcription factor RAP2-7-like isoform X1

2.2e-63

100

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Query:  MESNARAAVGDPPVNGLVMTSEHAPLWNGTQSSFFPSEESMTEKRLALGSSQGVPNWAWQIHGPINAAQMPLFSTAASSGFSFSATHFPAAMPPPHQPSS
        MESNARAAVGDPPVNGLVMTSEHAPLWNGTQSSFFPSEESMTEKRLALGSSQGVPNWAWQIHGPINAAQMPLFSTAASSGFSFSATHFPAAMPPPHQPSS
Subjt:  MESNARAAVGDPPVNGLVMTSEHAPLWNGTQSSFFPSEESMTEKRLALGSSQGVPNWAWQIHGPINAAQMPLFSTAASSGFSFSATHFPAAMPPPHQPSS

Query:  IAQNIHFNSPKASLNSAQYHHL
        IAQNIHFNSPKASLNSAQYHHL
Subjt:  IAQNIHFNSPKASLNSAQYHHL

A0A6J1L4P2 ethylene-responsive transcription factor RAP2-7-like isoform X2

2.0e-61

96.75

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Query:  KMESNARAAVGDPPVNGLVMTSEHAPLWNGTQSSFFPSEESMTEKRLALGSSQGVPNWAWQIHGPINAAQMPLFSTAASSGFSFSATHFPAAMPPPHQPS
        KMESNARAAVGDPPVNGL MTSEHAPLWNGTQSSFFPSEESMTEKRLALGSSQGVPNWAWQIHGPINAAQMPLFSTAASSGFSFSATHFPAAMPPPHQPS
Subjt:  KMESNARAAVGDPPVNGLVMTSEHAPLWNGTQSSFFPSEESMTEKRLALGSSQGVPNWAWQIHGPINAAQMPLFSTAASSGFSFSATHFPAAMPPPHQPS

Query:  SIAQNIHFNSPKASLNSAQYHHL
        SIAQNIHFNS KASLN  QYHHL
Subjt:  SIAQNIHFNSPKASLNSAQYHHL

A0A6J1L7F2 ethylene-responsive transcription factor RAP2-7-like isoform X1

2.0e-61

96.75

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Query:  KMESNARAAVGDPPVNGLVMTSEHAPLWNGTQSSFFPSEESMTEKRLALGSSQGVPNWAWQIHGPINAAQMPLFSTAASSGFSFSATHFPAAMPPPHQPS
        KMESNARAAVGDPPVNGL MTSEHAPLWNGTQSSFFPSEESMTEKRLALGSSQGVPNWAWQIHGPINAAQMPLFSTAASSGFSFSATHFPAAMPPPHQPS
Subjt:  KMESNARAAVGDPPVNGLVMTSEHAPLWNGTQSSFFPSEESMTEKRLALGSSQGVPNWAWQIHGPINAAQMPLFSTAASSGFSFSATHFPAAMPPPHQPS

Query:  SIAQNIHFNSPKASLNSAQYHHL
        SIAQNIHFNS KASLN  QYHHL
Subjt:  SIAQNIHFNSPKASLNSAQYHHL

SwissProt top hits

e value

%identity

Alignment

Q9LVG2 AP2-like ethylene-responsive transcription factor TOE2

4.3e-08

41.51

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Query:  MESNARAAVGDPPVNGLVMTSEHAPLWNGTQSSFFPSEESMTEKRLALGSSQGVPNWAWQIHG------PINAAQMPLFSTAASSGFSFSATHFPA--AM
        ME++  AA  D P N L   S+H    +   S+FF   E   EK L L S Q  P   WQ H        + A   PLFS AASSGFS SAT  P+  A+
Subjt:  MESNARAAVGDPPVNGLVMTSEHAPLWNGTQSSFFPSEESMTEKRLALGSSQGVPNWAWQIHG------PINAAQMPLFSTAASSGFSFSATHFPA--AM

Query:  PPPHQP
          P QP
Subjt:  PPPHQP

Arabidopsis top hits

e value

%identity

Alignment

AT5G60120.1 target of early activation tagged (EAT) 2

3.0e-09

41.51

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Query:  MESNARAAVGDPPVNGLVMTSEHAPLWNGTQSSFFPSEESMTEKRLALGSSQGVPNWAWQIHG------PINAAQMPLFSTAASSGFSFSATHFPA--AM
        ME++  AA  D P N L   S+H    +   S+FF   E   EK L L S Q  P   WQ H        + A   PLFS AASSGFS SAT  P+  A+
Subjt:  MESNARAAVGDPPVNGLVMTSEHAPLWNGTQSSFFPSEESMTEKRLALGSSQGVPNWAWQIHG------PINAAQMPLFSTAASSGFSFSATHFPA--AM

Query:  PPPHQP
          P QP
Subjt:  PPPHQP

AT5G60120.2 target of early activation tagged (EAT) 2

3.0e-09

41.51

Show/hide

Query:  MESNARAAVGDPPVNGLVMTSEHAPLWNGTQSSFFPSEESMTEKRLALGSSQGVPNWAWQIHG------PINAAQMPLFSTAASSGFSFSATHFPA--AM
        ME++  AA  D P N L   S+H    +   S+FF   E   EK L L S Q  P   WQ H        + A   PLFS AASSGFS SAT  P+  A+
Subjt:  MESNARAAVGDPPVNGLVMTSEHAPLWNGTQSSFFPSEESMTEKRLALGSSQGVPNWAWQIHG------PINAAQMPLFSTAASSGFSFSATHFPA--AM

Query:  PPPHQP
          P QP
Subjt:  PPPHQP

Sequences

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CDS sequence

Show/hide CDS sequence

ATGTTGAAGATGGAGAGCAATGCTCGTGCAGCAGTTGGCGATCCACCTGTGAATGGATTGGTAATGACATCAGAGCATGCTCCCTTATGGAACGGTACACAATCTAGCTT
CTTCCCCAGTGAGGAAAGCATGACAGAGAAGAGACTTGCATTAGGTTCATCCCAAGGAGTCCCTAACTGGGCATGGCAAATCCATGGCCCGATTAATGCCGCCCAAATGC
CACTGTTCTCTACTGCAGCATCATCAGGATTCTCATTTTCAGCTACCCATTTCCCGGCTGCCATGCCTCCGCCTCACCAACCGAGCTCAATCGCCCAAAATATCCATTTC
AATTCTCCCAAAGCCTCCCTCAACTCCGCCCAGTATCACCACCTAACACTTTCCAACCCGTCCCGGAGAGCCTTCAAGCCATTTACAAATGAAGTAGGTTTATGGATTGA
AGCGTTATAG

mRNA sequence

Show/hide mRNA sequence

AATTATGTATGTTGAAGATGGAGAGCAATGCTCGTGCAGCAGTTGGCGATCCACCTGTGAATGGATTGGTAATGACATCAGAGCATGCTCCCTTATGGAACGGTACACAA
TCTAGCTTCTTCCCCAGTGAGGAAAGCATGACAGAGAAGAGACTTGCATTAGGTTCATCCCAAGGAGTCCCTAACTGGGCATGGCAAATCCATGGCCCGATTAATGCCGC
CCAAATGCCACTGTTCTCTACTGCAGCATCATCAGGATTCTCATTTTCAGCTACCCATTTCCCGGCTGCCATGCCTCCGCCTCACCAACCGAGCTCAATCGCCCAAAATA
TCCATTTCAATTCTCCCAAAGCCTCCCTCAACTCCGCCCAGTATCACCACCTAACACTTTCCAACCCGTCCCGGAGAGCCTTCAAGCCATTTACAAATGAAGTAGGTTTA
TGGATTGAAGCGTTATAG

Protein sequence

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MLKMESNARAAVGDPPVNGLVMTSEHAPLWNGTQSSFFPSEESMTEKRLALGSSQGVPNWAWQIHGPINAAQMPLFSTAASSGFSFSATHFPAAMPPPHQPSSIAQNIHF
NSPKASLNSAQYHHLTLSNPSRRAFKPFTNEVGLWIEAL

CmoCh02G008580 (gene) of Cucurbita moschata (Rifu) v1 genome