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CmoCh02G008610 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G008610
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionDNA repair protein RAD51 homolog 2-like
Genome locationCmo_Chr02:5240195..5240858
RNA-Seq ExpressionCmoCh02G008610
SyntenyCmoCh02G008610
Gene Ontology termsGO:0000724 - double-strand break repair via homologous recombination (biological process)
GO:0033063 - Rad51B-Rad51C-Rad51D-XRCC2 complex (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR030548 - DNA repair protein RAD51 homologue 2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605511.1 DNA repair protein RAD51-like 2, partial [Cucurbita argyrosperma subsp. sororia]2.3e-2187.5Show/hide
Query:  MTNKLMNQMGLHKSKTNIFAERIINTAKVMIELREALSLTEFELMELLDVGLLEVAAAVAHIIEIASPPYQT
        MTNKLMNQMGLH+S TNIFAERIINTAK      EALSLTEFELMELLDVGLLEVA+AVAHIIEIASPPYQT
Subjt:  MTNKLMNQMGLHKSKTNIFAERIINTAKVMIELREALSLTEFELMELLDVGLLEVAAAVAHIIEIASPPYQT

KAG7010599.1 DNA repair protein RAD51-like 2 [Cucurbita argyrosperma subsp. argyrosperma]4.1e-1873.75Show/hide
Query:  MTNKLMNQMGLHKSKTNIFAERIINTAKVMIELREALSLTEFELMELLDVGLLEVAAAVAHIIEIASPPYQTVRNQLLLF
        M NKL+NQMGL +S  NIFA R INTAK      EALSLTEFELMELLDVGL EVA+AVAHI E+ASPPYQTV  QL+LF
Subjt:  MTNKLMNQMGLHKSKTNIFAERIINTAKVMIELREALSLTEFELMELLDVGLLEVAAAVAHIIEIASPPYQTVRNQLLLF

KAG7035449.1 DNA repair protein RAD51-like 2 [Cucurbita argyrosperma subsp. argyrosperma]2.7e-2273.96Show/hide
Query:  MTNKLMNQMGLHKSKTNIFAERIINTAKVMIELREALSLTEFELMELLDVGLLEVAAAVAHIIEIASPPYQTV---RNQLLLFIDCQAHY-TCLRG
        MTNKLMNQMGLH+S TNIFAERIINTAK      EALSLTEFELMELLDVGLLEVA+AVAHIIEIASPPYQTV    +Q L       H  TCL+G
Subjt:  MTNKLMNQMGLHKSKTNIFAERIINTAKVMIELREALSLTEFELMELLDVGLLEVAAAVAHIIEIASPPYQTV---RNQLLLFIDCQAHY-TCLRG

XP_022947033.1 DNA repair protein RAD51 homolog 2-like [Cucurbita moschata]4.2e-2391.67Show/hide
Query:  MTNKLMNQMGLHKSKTNIFAERIINTAKVMIELREALSLTEFELMELLDVGLLEVAAAVAHIIEIASPPYQT
        MTNKLMNQMGLHKSKTNIFAERIINTAK      EALSLTEFELMELLDVGLLEVAAAVAHIIEIASPPYQT
Subjt:  MTNKLMNQMGLHKSKTNIFAERIINTAKVMIELREALSLTEFELMELLDVGLLEVAAAVAHIIEIASPPYQT

XP_022986663.1 DNA repair protein RAD51 homolog 2 isoform X1 [Cucurbita maxima]1.3e-1665.62Show/hide
Query:  MTNKLMNQMGLHKSKTNIFAERIINTAKVMIELREALSLTEFELMELLDVGLLEVAAAVAHIIEIASPPYQTV---RNQLLLFIDCQAHY-TCLRG
        M NKL+NQMGL +S  NIFA R INTAK      EALSLTEFELMELLDVGL EVA+AVAHI EIASPPYQTV     Q L       H  TCL+G
Subjt:  MTNKLMNQMGLHKSKTNIFAERIINTAKVMIELREALSLTEFELMELLDVGLLEVAAAVAHIIEIASPPYQTV---RNQLLLFIDCQAHY-TCLRG

TrEMBL top hitse value%identityAlignment
A0A6J1FTX6 DNA repair protein RAD51 homolog 2 isoform X16.4e-1765.62Show/hide
Query:  MTNKLMNQMGLHKSKTNIFAERIINTAKVMIELREALSLTEFELMELLDVGLLEVAAAVAHIIEIASPPYQTV---RNQLLLFIDCQAHY-TCLRG
        M NKL+NQMGL +S  NIFA R INTAK      EALSLTEFELMELLDVGL EVA+AVAHI EIASPPYQTV     Q L       H  TCL+G
Subjt:  MTNKLMNQMGLHKSKTNIFAERIINTAKVMIELREALSLTEFELMELLDVGLLEVAAAVAHIIEIASPPYQTV---RNQLLLFIDCQAHY-TCLRG

A0A6J1FWQ4 DNA repair protein RAD51 homolog 2 isoform X26.4e-1765.62Show/hide
Query:  MTNKLMNQMGLHKSKTNIFAERIINTAKVMIELREALSLTEFELMELLDVGLLEVAAAVAHIIEIASPPYQTV---RNQLLLFIDCQAHY-TCLRG
        M NKL+NQMGL +S  NIFA R INTAK      EALSLTEFELMELLDVGL EVA+AVAHI EIASPPYQTV     Q L       H  TCL+G
Subjt:  MTNKLMNQMGLHKSKTNIFAERIINTAKVMIELREALSLTEFELMELLDVGLLEVAAAVAHIIEIASPPYQTV---RNQLLLFIDCQAHY-TCLRG

A0A6J1G5H9 DNA repair protein RAD51 homolog 2-like2.0e-2391.67Show/hide
Query:  MTNKLMNQMGLHKSKTNIFAERIINTAKVMIELREALSLTEFELMELLDVGLLEVAAAVAHIIEIASPPYQT
        MTNKLMNQMGLHKSKTNIFAERIINTAK      EALSLTEFELMELLDVGLLEVAAAVAHIIEIASPPYQT
Subjt:  MTNKLMNQMGLHKSKTNIFAERIINTAKVMIELREALSLTEFELMELLDVGLLEVAAAVAHIIEIASPPYQT

A0A6J1JBU9 DNA repair protein RAD51 homolog 2 isoform X26.4e-1765.62Show/hide
Query:  MTNKLMNQMGLHKSKTNIFAERIINTAKVMIELREALSLTEFELMELLDVGLLEVAAAVAHIIEIASPPYQTV---RNQLLLFIDCQAHY-TCLRG
        M NKL+NQMGL +S  NIFA R INTAK      EALSLTEFELMELLDVGL EVA+AVAHI EIASPPYQTV     Q L       H  TCL+G
Subjt:  MTNKLMNQMGLHKSKTNIFAERIINTAKVMIELREALSLTEFELMELLDVGLLEVAAAVAHIIEIASPPYQTV---RNQLLLFIDCQAHY-TCLRG

A0A6J1JH72 DNA repair protein RAD51 homolog 2 isoform X16.4e-1765.62Show/hide
Query:  MTNKLMNQMGLHKSKTNIFAERIINTAKVMIELREALSLTEFELMELLDVGLLEVAAAVAHIIEIASPPYQTV---RNQLLLFIDCQAHY-TCLRG
        M NKL+NQMGL +S  NIFA R INTAK      EALSLTEFELMELLDVGL EVA+AVAHI EIASPPYQTV     Q L       H  TCL+G
Subjt:  MTNKLMNQMGLHKSKTNIFAERIINTAKVMIELREALSLTEFELMELLDVGLLEVAAAVAHIIEIASPPYQTV---RNQLLLFIDCQAHY-TCLRG

SwissProt top hitse value%identityAlignment
Q9SK02 DNA repair protein RAD51 homolog 21.6e-1254.55Show/hide
Query:  MTNKLMNQMGLHKSKTNIFAERIINTAKVMIELREALSLTEFELMELLDVGLLEVAAAVAHIIEIASPPYQTVRNQL
        M NKL+ +MGLH   +NIFA R I TAK      +ALS+TEFELMELLDVG+ E+ +A++ I E  SPP Q+ R+ L
Subjt:  MTNKLMNQMGLHKSKTNIFAERIINTAKVMIELREALSLTEFELMELLDVGLLEVAAAVAHIIEIASPPYQTVRNQL

Arabidopsis top hitse value%identityAlignment
AT2G28560.1 DNA repair (Rad51) family protein1.1e-1354.55Show/hide
Query:  MTNKLMNQMGLHKSKTNIFAERIINTAKVMIELREALSLTEFELMELLDVGLLEVAAAVAHIIEIASPPYQTVRNQL
        M NKL+ +MGLH   +NIFA R I TAK      +ALS+TEFELMELLDVG+ E+ +A++ I E  SPP Q+ R+ L
Subjt:  MTNKLMNQMGLHKSKTNIFAERIINTAKVMIELREALSLTEFELMELLDVGLLEVAAAVAHIIEIASPPYQTVRNQL

AT2G28560.2 DNA repair (Rad51) family protein1.1e-1354.55Show/hide
Query:  MTNKLMNQMGLHKSKTNIFAERIINTAKVMIELREALSLTEFELMELLDVGLLEVAAAVAHIIEIASPPYQTVRNQL
        M NKL+ +MGLH   +NIFA R I TAK      +ALS+TEFELMELLDVG+ E+ +A++ I E  SPP Q+ R+ L
Subjt:  MTNKLMNQMGLHKSKTNIFAERIINTAKVMIELREALSLTEFELMELLDVGLLEVAAAVAHIIEIASPPYQTVRNQL

AT2G28560.3 DNA repair (Rad51) family protein2.5e-0556.41Show/hide
Query:  LTEFELMELLDVGLLEVAAAVAHIIEIASPPYQTVRNQL
        +TEFELMELLDVG+ E+ +A++ I E  SPP Q+ R+ L
Subjt:  LTEFELMELLDVGLLEVAAAVAHIIEIASPPYQTVRNQL

AT2G28560.4 DNA repair (Rad51) family protein2.5e-0556.41Show/hide
Query:  LTEFELMELLDVGLLEVAAAVAHIIEIASPPYQTVRNQL
        +TEFELMELLDVG+ E+ +A++ I E  SPP Q+ R+ L
Subjt:  LTEFELMELLDVGLLEVAAAVAHIIEIASPPYQTVRNQL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAACAAATTAATGAATCAGATGGGATTGCACAAATCGAAAACTAATATTTTCGCAGAGCGAATTATTAACACAGCTAAGGTAATGATTGAACTTCGTGAAGCTTT
ATCCTTAACTGAATTTGAGTTGATGGAGTTATTGGACGTGGGATTGTTGGAAGTTGCAGCAGCAGTTGCGCACATTATTGAAATTGCTTCTCCTCCTTATCAGACGGTAA
GAAATCAGTTGCTTCTATTTATTGATTGTCAAGCTCATTATACTTGTCTAAGAGGATTCTTTTTTGTTTATGCTTTCCACATCCCTGACTTCTGTTGCTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACGAACAAATTAATGAATCAGATGGGATTGCACAAATCGAAAACTAATATTTTCGCAGAGCGAATTATTAACACAGCTAAGGTAATGATTGAACTTCGTGAAGCTTT
ATCCTTAACTGAATTTGAGTTGATGGAGTTATTGGACGTGGGATTGTTGGAAGTTGCAGCAGCAGTTGCGCACATTATTGAAATTGCTTCTCCTCCTTATCAGACGGTAA
GAAATCAGTTGCTTCTATTTATTGATTGTCAAGCTCATTATACTTGTCTAAGAGGATTCTTTTTTGTTTATGCTTTCCACATCCCTGACTTCTGTTGCTTTTAG
Protein sequenceShow/hide protein sequence
MTNKLMNQMGLHKSKTNIFAERIINTAKVMIELREALSLTEFELMELLDVGLLEVAAAVAHIIEIASPPYQTVRNQLLLFIDCQAHYTCLRGFFFVYAFHIPDFCCF