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CmoCh02G008940 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G008940
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionProtein of unknown function, DUF584
Genome locationCmo_Chr02:5513457..5513939
RNA-Seq ExpressionCmoCh02G008940
SyntenyCmoCh02G008940
Gene Ontology termsNA
InterPro domainsIPR007608 - Senescence regulator S40


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605549.1 hypothetical protein SDJN03_02866, partial [Cucurbita argyrosperma subsp. sororia]7.1e-8395.78Show/hide
Query:  MATGKSCYGRSNYRFLSGDISGHHHSFTSDLPFELNESDIYNSGSLISPEIRRSPIPAKRISKKPSSNPVELRGGASSLPVNIPDWSKILKEEYREKRSV
        MATGKSCYGRSNYRFLSGDISGHHHSFTSDLPFELNESDIYNSGSLISPEIRRSPIPAKRISKKPSSNPVELRGGASSLPVNIPDWSKILKEEYREKRSV
Subjt:  MATGKSCYGRSNYRFLSGDISGHHHSFTSDLPFELNESDIYNSGSLISPEIRRSPIPAKRISKKPSSNPVELRGGASSLPVNIPDWSKILKEEYREKRSV

Query:  EY------DEEDWEEMRVPPHEFLARQTARTRTASFSVHEGIGRTLKGRDMSRVRNAIWEKIGFED
        EY      DEEDWEEMRVPPHEFLARQTARTRTASFSVHEGIGRTLKGRD+SRVRNAIWEKIGFED
Subjt:  EY------DEEDWEEMRVPPHEFLARQTARTRTASFSVHEGIGRTLKGRDMSRVRNAIWEKIGFED

XP_022958716.1 uncharacterized protein LOC111459858 [Cucurbita moschata]3.4e-85100Show/hide
Query:  MATGKSCYGRSNYRFLSGDISGHHHSFTSDLPFELNESDIYNSGSLISPEIRRSPIPAKRISKKPSSNPVELRGGASSLPVNIPDWSKILKEEYREKRSV
        MATGKSCYGRSNYRFLSGDISGHHHSFTSDLPFELNESDIYNSGSLISPEIRRSPIPAKRISKKPSSNPVELRGGASSLPVNIPDWSKILKEEYREKRSV
Subjt:  MATGKSCYGRSNYRFLSGDISGHHHSFTSDLPFELNESDIYNSGSLISPEIRRSPIPAKRISKKPSSNPVELRGGASSLPVNIPDWSKILKEEYREKRSV

Query:  EYDEEDWEEMRVPPHEFLARQTARTRTASFSVHEGIGRTLKGRDMSRVRNAIWEKIGFED
        EYDEEDWEEMRVPPHEFLARQTARTRTASFSVHEGIGRTLKGRDMSRVRNAIWEKIGFED
Subjt:  EYDEEDWEEMRVPPHEFLARQTARTRTASFSVHEGIGRTLKGRDMSRVRNAIWEKIGFED

XP_022996303.1 uncharacterized protein LOC111491571 [Cucurbita maxima]2.3e-8193.98Show/hide
Query:  MATGKSCYGRSNYRFLSGDISGHHHSFTSDLPFELNESDIYNSGSLISPEIRRSPIPAKRISKKPSSNPVELRGGASSLPVNIPDWSKILKEEYREKRSV
        MA+GKSCYGRSNYRFLSGDISGHHHSFTSDLPFELNESDIYNSGSLISPEIRRSPIPAKRISKKPSSNPVELRGGASSLPVNIPDWSKILKEEYREKRSV
Subjt:  MATGKSCYGRSNYRFLSGDISGHHHSFTSDLPFELNESDIYNSGSLISPEIRRSPIPAKRISKKPSSNPVELRGGASSLPVNIPDWSKILKEEYREKRSV

Query:  EY------DEEDWEEMRVPPHEFLARQTARTRTASFSVHEGIGRTLKGRDMSRVRNAIWEKIGFED
        EY      DE+DWEEMRVPPHEFLARQ ARTRTASFSVHEGIGRTLKGRD+SRVRNAIWEKIGFED
Subjt:  EY------DEEDWEEMRVPPHEFLARQTARTRTASFSVHEGIGRTLKGRDMSRVRNAIWEKIGFED

XP_023534501.1 uncharacterized protein LOC111796040 [Cucurbita pepo subsp. pepo]7.6e-7794.94Show/hide
Query:  MATGKSCYGRSNYRFLSGDISGHHHSFTSDLPFELNESDIYNSGSLISPEIRRSPIPAKRISKKPSSNPVELRGGASSLPVNIPDWSKILKEEYREKRSV
        MATGKSCYGRSNYRFLSGDISGHHHSFTSDLPFELNESDIYNSGSLISPEIRRSPIPAKRISKKPSSNPVELRGGASSLPVNIPDWSKILKEEYREKRSV
Subjt:  MATGKSCYGRSNYRFLSGDISGHHHSFTSDLPFELNESDIYNSGSLISPEIRRSPIPAKRISKKPSSNPVELRGGASSLPVNIPDWSKILKEEYREKRSV

Query:  EY------DEEDWEEMRVPPHEFLARQTARTRTASFSVHEGIGRTLKGRDMSRVRNAI
        EY      DE+DWEEMRVPPHEFLARQTARTRTASFSVHEGIGRTLKGRD+SRVRNAI
Subjt:  EY------DEEDWEEMRVPPHEFLARQTARTRTASFSVHEGIGRTLKGRDMSRVRNAI

XP_038901889.1 uncharacterized protein LOC120088567 [Benincasa hispida]1.5e-6179.76Show/hide
Query:  MATGKSCYGRSNYRFLSGDISG--HHHSFTSDLPFELNESDIYNSGSLISPEIRRSPIPAKRISKKPSSNPVEL-RGGASSLPVNIPDWSKILKEEYREK
        MATGKSCYGRSNYRFL+GDI+G  HHHSFTSDL FELNESDIYNSGS  SP   RSP  A RISKKPSS  VE   GGASS PVNIPDWSKILKEEYREK
Subjt:  MATGKSCYGRSNYRFLSGDISG--HHHSFTSDLPFELNESDIYNSGSLISPEIRRSPIPAKRISKKPSSNPVEL-RGGASSLPVNIPDWSKILKEEYREK

Query:  R-----SVEYDEEDWEEMRVPPHEFLARQTARTRTASFSVHEGIGRTLKGRDMSRVRNAIWEKIGFED
        R      +E DE++ EEMRVPPHEFLARQ ARTR ASFSVHEGIGRTLKGRD+SRVRNAIWEK GFED
Subjt:  R-----SVEYDEEDWEEMRVPPHEFLARQTARTRTASFSVHEGIGRTLKGRDMSRVRNAIWEKIGFED

TrEMBL top hitse value%identityAlignment
A0A0A0KBD5 Uncharacterized protein4.0e-5574.71Show/hide
Query:  MATGKSCYG-RSNYRFLSGDISGHHHSFTSDLPFELNESDIYNSGSLISPEIRRSP--IPAKRISKKPSSNPVEL-----RGGASSLPVNIPDWSKILKE
        MATGKSCYG RS+YRFL GDISG HHSFTSD  FELNESDIYNSGS       RSP  I  K++S K S   VE+      GGASSLPVNIPDWSKILKE
Subjt:  MATGKSCYG-RSNYRFLSGDISGHHHSFTSDLPFELNESDIYNSGSLISPEIRRSP--IPAKRISKKPSSNPVEL-----RGGASSLPVNIPDWSKILKE

Query:  EYREKRSVEY------DEEDWEEMRVPPHEFLARQTARTRTASFSVHEGIGRTLKGRDMSRVRNAIWEKIGFED
        EYREKRS+EY      DEE+ EEMRVPPHEFLARQ ARTR ASFSVHEGIGRTLKGRD+SRVRNAIWEK GFED
Subjt:  EYREKRSVEY------DEEDWEEMRVPPHEFLARQTARTRTASFSVHEGIGRTLKGRDMSRVRNAIWEKIGFED

A0A1S3CKD1 uncharacterized protein LOC1035019494.5e-5976.79Show/hide
Query:  MATGKSCYGRSNYRFLSGDISG--HHHSFTSDLPFELNESDIYNSGSLISPEIRRSPIPAKRISKKPSSNPVELRGGASSLPVNIPDWSKILKEEYREKR
        MATGKSCYGRSNYRFL+GDISG  HHHSFTSD  FELNESDIYNSG+  SP    + IP K+IS K     V+  GGASSLPVNIPDWSKILKEEYREKR
Subjt:  MATGKSCYGRSNYRFLSGDISG--HHHSFTSDLPFELNESDIYNSGSLISPEIRRSPIPAKRISKKPSSNPVELRGGASSLPVNIPDWSKILKEEYREKR

Query:  SVEY------DEEDWEEMRVPPHEFLARQTARTRTASFSVHEGIGRTLKGRDMSRVRNAIWEKIGFED
        S EY      DE++ EEMRVPPHEFLARQ ARTR ASFSVHEGIGRTLKGRD+SRVRNAIWEK GFED
Subjt:  SVEY------DEEDWEEMRVPPHEFLARQTARTRTASFSVHEGIGRTLKGRDMSRVRNAIWEKIGFED

A0A5A7SXR0 Uncharacterized protein4.5e-5976.79Show/hide
Query:  MATGKSCYGRSNYRFLSGDISG--HHHSFTSDLPFELNESDIYNSGSLISPEIRRSPIPAKRISKKPSSNPVELRGGASSLPVNIPDWSKILKEEYREKR
        MATGKSCYGRSNYRFL+GDISG  HHHSFTSD  FELNESDIYNSG+  SP    + IP K+IS K     V+  GGASSLPVNIPDWSKILKEEYREKR
Subjt:  MATGKSCYGRSNYRFLSGDISG--HHHSFTSDLPFELNESDIYNSGSLISPEIRRSPIPAKRISKKPSSNPVELRGGASSLPVNIPDWSKILKEEYREKR

Query:  SVEY------DEEDWEEMRVPPHEFLARQTARTRTASFSVHEGIGRTLKGRDMSRVRNAIWEKIGFED
        S EY      DE++ EEMRVPPHEFLARQ ARTR ASFSVHEGIGRTLKGRD+SRVRNAIWEK GFED
Subjt:  SVEY------DEEDWEEMRVPPHEFLARQTARTRTASFSVHEGIGRTLKGRDMSRVRNAIWEKIGFED

A0A6J1H2V6 uncharacterized protein LOC1114598581.7e-85100Show/hide
Query:  MATGKSCYGRSNYRFLSGDISGHHHSFTSDLPFELNESDIYNSGSLISPEIRRSPIPAKRISKKPSSNPVELRGGASSLPVNIPDWSKILKEEYREKRSV
        MATGKSCYGRSNYRFLSGDISGHHHSFTSDLPFELNESDIYNSGSLISPEIRRSPIPAKRISKKPSSNPVELRGGASSLPVNIPDWSKILKEEYREKRSV
Subjt:  MATGKSCYGRSNYRFLSGDISGHHHSFTSDLPFELNESDIYNSGSLISPEIRRSPIPAKRISKKPSSNPVELRGGASSLPVNIPDWSKILKEEYREKRSV

Query:  EYDEEDWEEMRVPPHEFLARQTARTRTASFSVHEGIGRTLKGRDMSRVRNAIWEKIGFED
        EYDEEDWEEMRVPPHEFLARQTARTRTASFSVHEGIGRTLKGRDMSRVRNAIWEKIGFED
Subjt:  EYDEEDWEEMRVPPHEFLARQTARTRTASFSVHEGIGRTLKGRDMSRVRNAIWEKIGFED

A0A6J1KAF0 uncharacterized protein LOC1114915711.1e-8193.98Show/hide
Query:  MATGKSCYGRSNYRFLSGDISGHHHSFTSDLPFELNESDIYNSGSLISPEIRRSPIPAKRISKKPSSNPVELRGGASSLPVNIPDWSKILKEEYREKRSV
        MA+GKSCYGRSNYRFLSGDISGHHHSFTSDLPFELNESDIYNSGSLISPEIRRSPIPAKRISKKPSSNPVELRGGASSLPVNIPDWSKILKEEYREKRSV
Subjt:  MATGKSCYGRSNYRFLSGDISGHHHSFTSDLPFELNESDIYNSGSLISPEIRRSPIPAKRISKKPSSNPVELRGGASSLPVNIPDWSKILKEEYREKRSV

Query:  EY------DEEDWEEMRVPPHEFLARQTARTRTASFSVHEGIGRTLKGRDMSRVRNAIWEKIGFED
        EY      DE+DWEEMRVPPHEFLARQ ARTRTASFSVHEGIGRTLKGRD+SRVRNAIWEKIGFED
Subjt:  EY------DEEDWEEMRVPPHEFLARQTARTRTASFSVHEGIGRTLKGRDMSRVRNAIWEKIGFED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G28400.1 Protein of unknown function, DUF5847.7e-2746.55Show/hide
Query:  MATGKSCYGRSNYRFLSGDISGHHHSFTSDLPFELNESDIYNSGSLISPEIRRSPIPAKRISKKPSSNPVELRGG------ASSLPVNIPDWSKILKEEY
        MAT K  Y R ++RF + D    H + TSD  FEL+E D++N+GS  S     S +    I+   +    ++ GG      ASSLPVN+PDWSKIL +E 
Subjt:  MATGKSCYGRSNYRFLSGDISGHHHSFTSDLPFELNESDIYNSGSLISPEIRRSPIPAKRISKKPSSNPVELRGG------ASSLPVNIPDWSKILKEEY

Query:  REKRSVEYDEE-DWEEM-------RVPPHEFLARQTARTRTASFSVHEGIGRTLKGRDMSRVRNAIWEKIGFED
        R +R +  +EE D +E+       RVPPHE LA +    R ASFSVHEG GRTLKGRD+SRVRN I++  G ED
Subjt:  REKRSVEYDEE-DWEEM-------RVPPHEFLARQTARTRTASFSVHEGIGRTLKGRDMSRVRNAIWEKIGFED

AT3G45210.1 Protein of unknown function, DUF5845.7e-3053.46Show/hide
Query:  ATGKSCYGRSNYRFLSGDISGHHHSFTSDLPFELNESDIYNSGSLISPEIRRSPIPAKRISKKPSSNPVELRGGASSLPVNIPDWSKILKEEYREKRSVE
        AT KS Y R ++RFL  D     ++ T D  FE +ESD+Y++ S  SPE RR  I + R   K S   V     ASSLP+N+ +WSKIL +E R  +S+E
Subjt:  ATGKSCYGRSNYRFLSGDISGHHHSFTSDLPFELNESDIYNSGSLISPEIRRSPIPAKRISKKPSSNPVELRGGASSLPVNIPDWSKILKEEYREKRSVE

Query:  YDEEDWEEMRVPPHEFLARQTARTRTASFSVHEGIGRTLKGRDMSRVRNAIWEKIGFED
         D +D  E ++PPHE+L    A+TR ASFSVHEGIGRTLKGRDMSRVRNAI EK GF D
Subjt:  YDEEDWEEMRVPPHEFLARQTARTRTASFSVHEGIGRTLKGRDMSRVRNAIWEKIGFED

AT4G04630.1 Protein of unknown function, DUF5842.4e-2040.97Show/hide
Query:  ELNESDIYN---SGSLISPEIRRSPIPAKRI--SKKPSSNPVELRGG-------ASSLPVNIPDWSKILKEEYREKRS-------VEYDEEDWEEMRVPP
        E  E D+++    G   SPE++   IP      S   SS+P  +R          SS P+N+PDWSK+  +    +RS        + D+ED +   VPP
Subjt:  ELNESDIYN---SGSLISPEIRRSPIPAKRI--SKKPSSNPVELRGG-------ASSLPVNIPDWSKILKEEYREKRS-------VEYDEEDWEEMRVPP

Query:  HEFLARQTARTRTASFSVHEGIGRTLKGRDMSRVRNAIWEKIGF
        HE++AR+ ART+ +SFS+ EG+GRTLKGRD+S+VRNA+  K GF
Subjt:  HEFLARQTARTRTASFSVHEGIGRTLKGRDMSRVRNAIWEKIGF

AT5G03230.1 Protein of unknown function, DUF5842.1e-2448.63Show/hide
Query:  FELNESDIYNSGSLISP---EIRRSPIPAKRISKKP-----SSNPVELRGGASSLPVNIPDWSKILKEEYREKRSVEYDEEDWEE----------MRVPP
        FE +ESDI+N G    P   + +RS I   R+ +KP     S N    + G  SLPVNIPDWSKILK EYR     + D +D +E            +PP
Subjt:  FELNESDIYNSGSLISP---EIRRSPIPAKRISKKP-----SSNPVELRGGASSLPVNIPDWSKILKEEYREKRSVEYDEEDWEE----------MRVPP

Query:  HEFLARQTARTRTASFSVHEGIGRTLKGRDMSRVRNAIWEKIGFED
        HE+LAR+    R +SF+VHEGIG T KGRD+ R+RNAIWEKIGF+D
Subjt:  HEFLARQTARTRTASFSVHEGIGRTLKGRDMSRVRNAIWEKIGFED

AT5G60680.1 Protein of unknown function, DUF5841.0e-3451.76Show/hide
Query:  MATGKSCYGRSNYRFLSGDISGHHHSFT-SDLPFELNESDIYNSGSLISPEIRRSPIPAKRISKKPSSNP--VELRGGASSLPVNIPDWSKILKEEYRE-
        MATGKS Y R +YRFL  D   +   FT SD   E +ESD++N     SP+  R    + R  KK S+ P        ASSLPVN+PDWSKIL+ EYR+ 
Subjt:  MATGKSCYGRSNYRFLSGDISGHHHSFT-SDLPFELNESDIYNSGSLISPEIRRSPIPAKRISKKPSSNP--VELRGGASSLPVNIPDWSKILKEEYRE-

Query:  -KRSVEYDEEDWEEMR-----VPPHEFLARQTARTRTASFSVHEGIGRTLKGRDMSRVRNAIWEKIGFED
         +RS+E +++D ++       +PPHEFL    A+TR ASFSVHEG+GRTLKGRD+SRVRNAI+EK GF+D
Subjt:  -KRSVEYDEEDWEEMR-----VPPHEFLARQTARTRTASFSVHEGIGRTLKGRDMSRVRNAIWEKIGFED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACCGGAAAAAGCTGTTACGGCCGCTCCAACTACCGTTTCCTCTCCGGCGACATCTCCGGCCACCACCACTCCTTCACTTCCGACTTACCGTTCGAACTCAACGA
ATCGGACATCTACAACTCCGGTAGTTTGATATCGCCGGAGATCCGGCGATCTCCGATCCCGGCGAAGCGAATCTCGAAAAAGCCGTCGTCGAATCCAGTGGAGTTACGCG
GCGGTGCTTCGTCGCTGCCGGTGAATATCCCGGACTGGTCGAAGATTCTAAAGGAGGAGTACAGAGAGAAGCGGAGTGTTGAATACGACGAGGAGGATTGGGAGGAAATG
AGAGTGCCGCCTCATGAGTTTTTGGCGAGGCAAACGGCGAGGACTAGGACGGCGTCGTTTTCGGTGCACGAAGGAATTGGAAGGACGTTGAAAGGGAGAGATATGAGTAG
GGTGAGAAATGCAATATGGGAAAAAATTGGGTTCGAGGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAACCGGAAAAAGCTGTTACGGCCGCTCCAACTACCGTTTCCTCTCCGGCGACATCTCCGGCCACCACCACTCCTTCACTTCCGACTTACCGTTCGAACTCAACGA
ATCGGACATCTACAACTCCGGTAGTTTGATATCGCCGGAGATCCGGCGATCTCCGATCCCGGCGAAGCGAATCTCGAAAAAGCCGTCGTCGAATCCAGTGGAGTTACGCG
GCGGTGCTTCGTCGCTGCCGGTGAATATCCCGGACTGGTCGAAGATTCTAAAGGAGGAGTACAGAGAGAAGCGGAGTGTTGAATACGACGAGGAGGATTGGGAGGAAATG
AGAGTGCCGCCTCATGAGTTTTTGGCGAGGCAAACGGCGAGGACTAGGACGGCGTCGTTTTCGGTGCACGAAGGAATTGGAAGGACGTTGAAAGGGAGAGATATGAGTAG
GGTGAGAAATGCAATATGGGAAAAAATTGGGTTCGAGGATTGA
Protein sequenceShow/hide protein sequence
MATGKSCYGRSNYRFLSGDISGHHHSFTSDLPFELNESDIYNSGSLISPEIRRSPIPAKRISKKPSSNPVELRGGASSLPVNIPDWSKILKEEYREKRSVEYDEEDWEEM
RVPPHEFLARQTARTRTASFSVHEGIGRTLKGRDMSRVRNAIWEKIGFED