; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh02G009080 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G009080
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionruBisCO large subunit-binding protein subunit alpha
Genome locationCmo_Chr02:5606165..5607192
RNA-Seq ExpressionCmoCh02G009080
SyntenyCmoCh02G009080
Gene Ontology termsGO:0042026 - protein refolding (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
InterPro domainsIPR027413 - GroEL-like equatorial domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7035480.1 hypothetical protein SDJN02_02276, partial [Cucurbita argyrosperma subsp. argyrosperma]2.8e-5081.94Show/hide
Query:  MASANAISSASILCSSQKSLRKVNQPQSNRVNYRQAGSRFVVRATAKDIAFDQSSRTALQSGIDKLANAVGLTLGPRGNFLVLLIYELVSIEFRFCAPRY
        MASANAISSASILCSSQKSLRKVNQPQSNRVNYRQAGSRFVVRATAKDIAFDQSSRTALQSGIDKLANAVGLTLGPRG                      
Subjt:  MASANAISSASILCSSQKSLRKVNQPQSNRVNYRQAGSRFVVRATAKDIAFDQSSRTALQSGIDKLANAVGLTLGPRGNFLVLLIYELVSIEFRFCAPRY

Query:  PALRRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE
            RNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE
Subjt:  PALRRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE

QDE10505.1 ruBisCO1 [Cucurbita pepo]2.8e-5081.94Show/hide
Query:  MASANAISSASILCSSQKSLRKVNQPQSNRVNYRQAGSRFVVRATAKDIAFDQSSRTALQSGIDKLANAVGLTLGPRGNFLVLLIYELVSIEFRFCAPRY
        MASANAISSASILCSSQKSLRKVNQPQSNRVNYRQAGSRFVVRATAKDIAFDQSSRTALQSGIDKLANAVGLTLGPRG                      
Subjt:  MASANAISSASILCSSQKSLRKVNQPQSNRVNYRQAGSRFVVRATAKDIAFDQSSRTALQSGIDKLANAVGLTLGPRGNFLVLLIYELVSIEFRFCAPRY

Query:  PALRRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE
            RNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE
Subjt:  PALRRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE

XP_022958173.1 ruBisCO large subunit-binding protein subunit alpha [Cucurbita moschata]2.8e-5081.94Show/hide
Query:  MASANAISSASILCSSQKSLRKVNQPQSNRVNYRQAGSRFVVRATAKDIAFDQSSRTALQSGIDKLANAVGLTLGPRGNFLVLLIYELVSIEFRFCAPRY
        MASANAISSASILCSSQKSLRKVNQPQSNRVNYRQAGSRFVVRATAKDIAFDQSSRTALQSGIDKLANAVGLTLGPRG                      
Subjt:  MASANAISSASILCSSQKSLRKVNQPQSNRVNYRQAGSRFVVRATAKDIAFDQSSRTALQSGIDKLANAVGLTLGPRGNFLVLLIYELVSIEFRFCAPRY

Query:  PALRRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE
            RNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE
Subjt:  PALRRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE

XP_022995619.1 ruBisCO large subunit-binding protein subunit alpha [Cucurbita maxima]2.8e-5081.94Show/hide
Query:  MASANAISSASILCSSQKSLRKVNQPQSNRVNYRQAGSRFVVRATAKDIAFDQSSRTALQSGIDKLANAVGLTLGPRGNFLVLLIYELVSIEFRFCAPRY
        MASANAISSASILCSSQKSLRKVNQPQSNRVNYRQAGSRFVVRATAKDIAFDQSSRTALQSGIDKLANAVGLTLGPRG                      
Subjt:  MASANAISSASILCSSQKSLRKVNQPQSNRVNYRQAGSRFVVRATAKDIAFDQSSRTALQSGIDKLANAVGLTLGPRGNFLVLLIYELVSIEFRFCAPRY

Query:  PALRRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE
            RNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE
Subjt:  PALRRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE

XP_023534412.1 ruBisCO large subunit-binding protein subunit alpha [Cucurbita pepo subsp. pepo]2.8e-5081.94Show/hide
Query:  MASANAISSASILCSSQKSLRKVNQPQSNRVNYRQAGSRFVVRATAKDIAFDQSSRTALQSGIDKLANAVGLTLGPRGNFLVLLIYELVSIEFRFCAPRY
        MASANAISSASILCSSQKSLRKVNQPQSNRVNYRQAGSRFVVRATAKDIAFDQSSRTALQSGIDKLANAVGLTLGPRG                      
Subjt:  MASANAISSASILCSSQKSLRKVNQPQSNRVNYRQAGSRFVVRATAKDIAFDQSSRTALQSGIDKLANAVGLTLGPRGNFLVLLIYELVSIEFRFCAPRY

Query:  PALRRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE
            RNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE
Subjt:  PALRRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE

TrEMBL top hitse value%identityAlignment
A0A4Y5WS72 RuBisCO11.4e-5081.94Show/hide
Query:  MASANAISSASILCSSQKSLRKVNQPQSNRVNYRQAGSRFVVRATAKDIAFDQSSRTALQSGIDKLANAVGLTLGPRGNFLVLLIYELVSIEFRFCAPRY
        MASANAISSASILCSSQKSLRKVNQPQSNRVNYRQAGSRFVVRATAKDIAFDQSSRTALQSGIDKLANAVGLTLGPRG                      
Subjt:  MASANAISSASILCSSQKSLRKVNQPQSNRVNYRQAGSRFVVRATAKDIAFDQSSRTALQSGIDKLANAVGLTLGPRGNFLVLLIYELVSIEFRFCAPRY

Query:  PALRRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE
            RNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE
Subjt:  PALRRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE

A0A5A7SW32 RuBisCO large subunit-binding protein subunit alpha4.8e-4878.47Show/hide
Query:  MASANAISSASILCSSQKSLRKVNQPQSNRVNYRQAGSRFVVRATAKDIAFDQSSRTALQSGIDKLANAVGLTLGPRGNFLVLLIYELVSIEFRFCAPRY
        MASANA+SSASILCSS KSLRKVNQ Q+NRVNYRQAGSRFVVRATAK+IAFDQSSRTALQSGIDKLANAVGLTLGPRG                      
Subjt:  MASANAISSASILCSSQKSLRKVNQPQSNRVNYRQAGSRFVVRATAKDIAFDQSSRTALQSGIDKLANAVGLTLGPRGNFLVLLIYELVSIEFRFCAPRY

Query:  PALRRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE
            RNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE
Subjt:  PALRRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE

A0A5D3DFR6 RuBisCO large subunit-binding protein subunit alpha4.8e-4878.47Show/hide
Query:  MASANAISSASILCSSQKSLRKVNQPQSNRVNYRQAGSRFVVRATAKDIAFDQSSRTALQSGIDKLANAVGLTLGPRGNFLVLLIYELVSIEFRFCAPRY
        MASANA+SSASILCSS KSLRKVNQ Q+NRVNYRQAGSRFVVRATAK+IAFDQSSRTALQSGIDKLANAVGLTLGPRG                      
Subjt:  MASANAISSASILCSSQKSLRKVNQPQSNRVNYRQAGSRFVVRATAKDIAFDQSSRTALQSGIDKLANAVGLTLGPRGNFLVLLIYELVSIEFRFCAPRY

Query:  PALRRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE
            RNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE
Subjt:  PALRRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE

A0A6J1H2E5 ruBisCO large subunit-binding protein subunit alpha1.4e-5081.94Show/hide
Query:  MASANAISSASILCSSQKSLRKVNQPQSNRVNYRQAGSRFVVRATAKDIAFDQSSRTALQSGIDKLANAVGLTLGPRGNFLVLLIYELVSIEFRFCAPRY
        MASANAISSASILCSSQKSLRKVNQPQSNRVNYRQAGSRFVVRATAKDIAFDQSSRTALQSGIDKLANAVGLTLGPRG                      
Subjt:  MASANAISSASILCSSQKSLRKVNQPQSNRVNYRQAGSRFVVRATAKDIAFDQSSRTALQSGIDKLANAVGLTLGPRGNFLVLLIYELVSIEFRFCAPRY

Query:  PALRRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE
            RNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE
Subjt:  PALRRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE

A0A6J1K6F7 ruBisCO large subunit-binding protein subunit alpha1.4e-5081.94Show/hide
Query:  MASANAISSASILCSSQKSLRKVNQPQSNRVNYRQAGSRFVVRATAKDIAFDQSSRTALQSGIDKLANAVGLTLGPRGNFLVLLIYELVSIEFRFCAPRY
        MASANAISSASILCSSQKSLRKVNQPQSNRVNYRQAGSRFVVRATAKDIAFDQSSRTALQSGIDKLANAVGLTLGPRG                      
Subjt:  MASANAISSASILCSSQKSLRKVNQPQSNRVNYRQAGSRFVVRATAKDIAFDQSSRTALQSGIDKLANAVGLTLGPRGNFLVLLIYELVSIEFRFCAPRY

Query:  PALRRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE
            RNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE
Subjt:  PALRRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE

SwissProt top hitse value%identityAlignment
P08823 RuBisCO large subunit-binding protein subunit alpha, chloroplastic (Fragment)7.2e-2562.38Show/hide
Query:  ATAKDIAFDQSSRTALQSGIDKLANAVGLTLGPRGNFLVLLIYELVSIEFRFCAPRYPALRRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIR
        A AK+IAFDQ SR ALQ+G++KLANAVG+TLGPRG                          RNVVLDE+G+PKVVNDGVTIARAIEL +PMENAGAALIR
Subjt:  ATAKDIAFDQSSRTALQSGIDKLANAVGLTLGPRGNFLVLLIYELVSIEFRFCAPRYPALRRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIR

Query:  E
        E
Subjt:  E

P08926 RuBisCO large subunit-binding protein subunit alpha, chloroplastic4.1e-3663.51Show/hide
Query:  MASANAISSASILCS----SQKSLRKVNQPQSNRVNYRQAGSRFVVRATAKDIAFDQSSRTALQSGIDKLANAVGLTLGPRGNFLVLLIYELVSIEFRFC
        MAS NA+SS SIL S    +Q SL K    Q  RVN+RQ  +RFVV+A AKDIAFDQ SR+A+Q+GIDKLA+AVGLTLGPRG                  
Subjt:  MASANAISSASILCS----SQKSLRKVNQPQSNRVNYRQAGSRFVVRATAKDIAFDQSSRTALQSGIDKLANAVGLTLGPRGNFLVLLIYELVSIEFRFC

Query:  APRYPALRRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE
                RNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE
Subjt:  APRYPALRRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE

P21238 Chaperonin 60 subunit alpha 1, chloroplastic1.0e-3462.33Show/hide
Query:  MASANAISSASILCSSQKS-LRKVNQPQSNRVNY-RQAGSRFVVRATAKDIAFDQSSRTALQSGIDKLANAVGLTLGPRGNFLVLLIYELVSIEFRFCAP
        MASANA+SSAS+LCSS++S L   NQ Q  RV+Y ++   RF VRA  K+IAFDQ SR ALQ+GIDKLA+ VGLTLGPRG                    
Subjt:  MASANAISSASILCSSQKS-LRKVNQPQSNRVNY-RQAGSRFVVRATAKDIAFDQSSRTALQSGIDKLANAVGLTLGPRGNFLVLLIYELVSIEFRFCAP

Query:  RYPALRRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE
              RNVVLDEFGSPKVVNDGVTIARAIELP+ MENAGAALIRE
Subjt:  RYPALRRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE

P21239 RuBisCO large subunit-binding protein subunit alpha, chloroplastic (Fragment)2.4e-2866.98Show/hide
Query:  RFVVRATAKDIAFDQSSRTALQSGIDKLANAVGLTLGPRGNFLVLLIYELVSIEFRFCAPRYPALRRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAG
        RF VRA  K+I+FDQSSR ALQ+GIDKLA+AVGLTLGPRG                          RNVVLDEFGSPKVVNDGVTIARAIELPD MENAG
Subjt:  RFVVRATAKDIAFDQSSRTALQSGIDKLANAVGLTLGPRGNFLVLLIYELVSIEFRFCAPRYPALRRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAG

Query:  AALIRE
        AALIRE
Subjt:  AALIRE

P34794 RuBisCO large subunit-binding protein subunit alpha, chloroplastic1.8e-3662.76Show/hide
Query:  MASANAISSASILCSS-QKSLRKVNQPQSNRVNYRQAGSRFVVRATAKDIAFDQSSRTALQSGIDKLANAVGLTLGPRGNFLVLLIYELVSIEFRFCAPR
        MA+ANA+SS S+LCSS Q  L   +Q +  RV+YR+A  RF +RA  K+IAFDQSSR ALQ+GIDKLA+AVGLTLGPRG                     
Subjt:  MASANAISSASILCSS-QKSLRKVNQPQSNRVNYRQAGSRFVVRATAKDIAFDQSSRTALQSGIDKLANAVGLTLGPRGNFLVLLIYELVSIEFRFCAPR

Query:  YPALRRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE
             RNVVLDEFGSPKVVNDGVTIARAIELPD MENAGAALIRE
Subjt:  YPALRRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE

Arabidopsis top hitse value%identityAlignment
AT1G55490.1 chaperonin 60 beta1.5e-1436.76Show/hide
Query:  SSQKSLRKVNQPQSNR---VNYRQAGSRFVVRATAKDIAFDQSSRT--ALQSGIDKLANAVGLTLGPRGNFLVLLIYELVSIEFRFCAPRYPALRRNVVL
        S +K + K++     R   V  R   S   +   AK++ F++   T   LQ+G++KLA+ VG+TLGP+G                          RNVVL
Subjt:  SSQKSLRKVNQPQSNR---VNYRQAGSRFVVRATAKDIAFDQSSRT--ALQSGIDKLANAVGLTLGPRGNFLVLLIYELVSIEFRFCAPRYPALRRNVVL

Query:  D-EFGSPKVVNDGVTIARAIELPDPMENAGAALIRE
        + ++GSP++VNDGVT+AR +EL DP+EN GA L+R+
Subjt:  D-EFGSPKVVNDGVTIARAIELPDPMENAGAALIRE

AT1G55490.2 chaperonin 60 beta1.5e-1436.76Show/hide
Query:  SSQKSLRKVNQPQSNR---VNYRQAGSRFVVRATAKDIAFDQSSRT--ALQSGIDKLANAVGLTLGPRGNFLVLLIYELVSIEFRFCAPRYPALRRNVVL
        S +K + K++     R   V  R   S   +   AK++ F++   T   LQ+G++KLA+ VG+TLGP+G                          RNVVL
Subjt:  SSQKSLRKVNQPQSNR---VNYRQAGSRFVVRATAKDIAFDQSSRT--ALQSGIDKLANAVGLTLGPRGNFLVLLIYELVSIEFRFCAPRYPALRRNVVL

Query:  D-EFGSPKVVNDGVTIARAIELPDPMENAGAALIRE
        + ++GSP++VNDGVT+AR +EL DP+EN GA L+R+
Subjt:  D-EFGSPKVVNDGVTIARAIELPDPMENAGAALIRE

AT2G28000.1 chaperonin-60alpha7.1e-3662.33Show/hide
Query:  MASANAISSASILCSSQKS-LRKVNQPQSNRVNY-RQAGSRFVVRATAKDIAFDQSSRTALQSGIDKLANAVGLTLGPRGNFLVLLIYELVSIEFRFCAP
        MASANA+SSAS+LCSS++S L   NQ Q  RV+Y ++   RF VRA  K+IAFDQ SR ALQ+GIDKLA+ VGLTLGPRG                    
Subjt:  MASANAISSASILCSSQKS-LRKVNQPQSNRVNY-RQAGSRFVVRATAKDIAFDQSSRTALQSGIDKLANAVGLTLGPRGNFLVLLIYELVSIEFRFCAP

Query:  RYPALRRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE
              RNVVLDEFGSPKVVNDGVTIARAIELP+ MENAGAALIRE
Subjt:  RYPALRRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE

AT5G18820.1 TCP-1/cpn60 chaperonin family protein2.3e-1850.47Show/hide
Query:  VVRATAKDIAFDQSSRTALQSGIDKLANAVGLTLGPRGNFLVLLIYELVSIEFRFCAPRYPALRRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAA
        VVRA AK I + + SR  LQ+GIDKLA+AV +TLGPRG                          RNVVL E  + KV+NDGVTIA++IELPD +ENAGA 
Subjt:  VVRATAKDIAFDQSSRTALQSGIDKLANAVGLTLGPRGNFLVLLIYELVSIEFRFCAPRYPALRRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAA

Query:  LIRECDI
        LI+E  I
Subjt:  LIRECDI

AT5G56500.1 TCP-1/cpn60 chaperonin family protein2.0e-1440.71Show/hide
Query:  QAGSRFVVRATAKDIAF--DQSSRTALQSGIDKLANAVGLTLGPRGNFLVLLIYELVSIEFRFCAPRYPALRRNVVLD-EFGSPKVVNDGVTIARAIELP
        Q  +RF     AK + F  D ++   LQ+G++KLA+ VG+TLGP+G                          RNVVL+ ++GSP++VNDGVT+AR +EL 
Subjt:  QAGSRFVVRATAKDIAF--DQSSRTALQSGIDKLANAVGLTLGPRGNFLVLLIYELVSIEFRFCAPRYPALRRNVVLD-EFGSPKVVNDGVTIARAIELP

Query:  DPMENAGAALIRE
        DP+EN GA L+R+
Subjt:  DPMENAGAALIRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCTGCGAATGCAATTTCTTCCGCATCCATTCTTTGTTCTTCCCAGAAGAGCTTGAGGAAAGTGAATCAACCGCAGAGTAACAGGGTGAATTACAGACAGGCGGG
TAGCAGATTTGTTGTGAGAGCTACTGCAAAGGATATAGCGTTCGACCAGAGTTCTAGGACTGCACTTCAGTCTGGGATTGATAAGCTTGCCAATGCAGTCGGTCTGACTC
TTGGACCCAGGGGTAACTTTCTGGTTCTTTTGATTTATGAATTAGTTAGCATTGAATTTCGTTTCTGTGCTCCTCGTTATCCCGCCTTGCGGAGGAATGTTGTGCTGGAT
GAGTTCGGCAGTCCCAAAGTAGTAAATGATGGTGTGACAATTGCTCGTGCAATTGAGTTGCCTGATCCCATGGAGAATGCTGGTGCAGCTCTAATTAGGGAGTGCGATAT
ATATTTGATCTGTTATGATGCAAAAGCTTCTCATCTATCGGCCATTGAACATTAA
mRNA sequenceShow/hide mRNA sequence
AATCCTGGAATAGCCTCAACGGTTCTGGAAGAAGAAGAATCTTCTGGAACGTCCAACCCAACAATAAAATCAAACCCTAAATTCATTCATTACGTTCATCCTTTTGCTTA
CACACCTTATCCTGAAACCCAGCGAGCTCTACCGGAACTAAAACCTCCGAGCTTTGCTACCGGAAAATGGCGTCTGCGAATGCAATTTCTTCCGCATCCATTCTTTGTTC
TTCCCAGAAGAGCTTGAGGAAAGTGAATCAACCGCAGAGTAACAGGGTGAATTACAGACAGGCGGGTAGCAGATTTGTTGTGAGAGCTACTGCAAAGGATATAGCGTTCG
ACCAGAGTTCTAGGACTGCACTTCAGTCTGGGATTGATAAGCTTGCCAATGCAGTCGGTCTGACTCTTGGACCCAGGGGTAACTTTCTGGTTCTTTTGATTTATGAATTA
GTTAGCATTGAATTTCGTTTCTGTGCTCCTCGTTATCCCGCCTTGCGGAGGAATGTTGTGCTGGATGAGTTCGGCAGTCCCAAAGTAGTAAATGATGGTGTGACAATTGC
TCGTGCAATTGAGTTGCCTGATCCCATGGAGAATGCTGGTGCAGCTCTAATTAGGGAGTGCGATATATATTTGATCTGTTATGATGCAAAAGCTTCTCATCTATCGGCCA
TTGAACATTAA
Protein sequenceShow/hide protein sequence
MASANAISSASILCSSQKSLRKVNQPQSNRVNYRQAGSRFVVRATAKDIAFDQSSRTALQSGIDKLANAVGLTLGPRGNFLVLLIYELVSIEFRFCAPRYPALRRNVVLD
EFGSPKVVNDGVTIARAIELPDPMENAGAALIRECDIYLICYDAKASHLSAIEH