CuGenDBv2

Gene ID	CmoCh02G009240
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	damaged DNA binding;exodeoxyribonuclease IIIs
Genome location	Cmo_Chr02:5680242..5683237
RNA-Seq Expression	CmoCh02G009240
Synteny	CmoCh02G009240
Gene Ontology terms	GO:0000077 - DNA damage checkpoint (biological process) GO:0006281 - DNA repair (biological process) GO:0030896 - checkpoint clamp complex (cellular component)
InterPro domains	IPR003021 - Rad1/Rec1/Rad17

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6605579.1 Cell cycle checkpoint protein RAD1, partial [Cucurbita argyrosperma subsp. sororia]

4.5e-166

95.22

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Query:  MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEY+AQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQAW
        LSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAG SPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQ  
Subjt:  LSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQAW

Query:  FVINKLKFELLVDFMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF
                   VDFMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF
Subjt:  FVINKLKFELLVDFMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF

Query:  IEFFVKPEEDTTDD
        IEFFVKPEEDTTDD
Subjt:  IEFFVKPEEDTTDD

KAG7035494.1 Cell cycle checkpoint protein RAD1 [Cucurbita argyrosperma subsp. argyrosperma]

1.4e-175

98.73

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Query:  MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEY+AQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQAW
        LSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAG SPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQAW
Subjt:  LSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQAW

Query:  FVINKLKFELLVDFMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF
        FVINKLKFE+LVDFMYYANTDLLISFHCDRPVSYRYKYKFL ATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF
Subjt:  FVINKLKFELLVDFMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF

Query:  IEFFVKPEEDTTDD
        IEFFVKPEEDTTDD
Subjt:  IEFFVKPEEDTTDD

XP_022957691.1 uncharacterized protein LOC111459157 isoform X1 [Cucurbita moschata]

4.1e-167

95.86

Show/hide

Query:  MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQAW
        LSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQ  
Subjt:  LSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQAW

Query:  FVINKLKFELLVDFMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF
                   VDFMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF
Subjt:  FVINKLKFELLVDFMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF

Query:  IEFFVKPEEDTTDD
        IEFFVKPEEDTTDD
Subjt:  IEFFVKPEEDTTDD

XP_022996322.1 uncharacterized protein LOC111491589 isoform X1 [Cucurbita maxima]

1.9e-164

94.59

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Query:  MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVDA++PDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQAW
        LSIVEIKYPGPDMQLLLKSVDS DACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQ  
Subjt:  LSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQAW

Query:  FVINKLKFELLVDFMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF
                   VDFMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQ SRIAF
Subjt:  FVINKLKFELLVDFMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF

Query:  IEFFVKPEEDTTDD
        IEFFVKPEEDTTDD
Subjt:  IEFFVKPEEDTTDD

XP_023534468.1 uncharacterized protein LOC111796019 isoform X1 [Cucurbita pepo subsp. pepo]

3.5e-166

94.9

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Query:  MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVDA++PDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHG+VLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQAW
        LSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQ  
Subjt:  LSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQAW

Query:  FVINKLKFELLVDFMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF
                   VDFMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF
Subjt:  FVINKLKFELLVDFMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF

Query:  IEFFVKPEEDTTDD
        IEFFVKPEEDTTDD
Subjt:  IEFFVKPEEDTTDD

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B4R8 uncharacterized protein LOC103486009

7.8e-156

88.22

Show/hide

Query:  MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVD ++PDLVC  DNVQGLVDAFTAVRWKRHQDA+IELSEHGIVLIVEESGCLQAKVYLQRE+FIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQAW
        LS +E+KYPGPDMQLLLK+VDS DACIYAEIRTRIP+TISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSV I+L+PSPPSVTFK EGHGDLQ  
Subjt:  LSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQAW

Query:  FVINKLKFELLVDFMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF
                   VDFMYYANTDLLISFHCDR VSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGG+LKVQHLVSVA+PSTSH HIDSAGYQQPSRIAF
Subjt:  FVINKLKFELLVDFMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF

Query:  IEFFVKPEEDTTDD
        IEFFVKPEED+++D
Subjt:  IEFFVKPEEDTTDD

A0A5D3DUR6 Syntaxin-22-like protein

7.8e-156

88.22

Show/hide

Query:  MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVD ++PDLVC  DNVQGLVDAFTAVRWKRHQDA+IELSEHGIVLIVEESGCLQAKVYLQRE+FIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQAW
        LS +E+KYPGPDMQLLLK+VDS DACIYAEIRTRIP+TISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSV I+L+PSPPSVTFK EGHGDLQ  
Subjt:  LSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQAW

Query:  FVINKLKFELLVDFMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF
                   VDFMYYANTDLLISFHCDR VSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGG+LKVQHLVSVA+PSTSH HIDSAGYQQPSRIAF
Subjt:  FVINKLKFELLVDFMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF

Query:  IEFFVKPEEDTTDD
        IEFFVKPEED+++D
Subjt:  IEFFVKPEEDTTDD

A0A6J1CW92 uncharacterized protein LOC111015362 isoform X1

5.1e-155

89.81

Show/hide

Query:  MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVD+++PDLVC LDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRE+FIRYEYSAQARPRFGVSLG FVDSLNTFSVPGR
Subjt:  MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQAW
         S  EIKYPGPDMQLL+KSVDS DACIYAEIRTRIPETISWDY FEPAGSSPLSFTVKSAALKEAIDDLEWPGSS+QI LEP+PPSVTFKGEGHGDLQ  
Subjt:  LSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQAW

Query:  FVINKLKFELLVDFMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF
                   VDFMYYANTDLLISFHCDR VSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTS  HIDSAGYQQPSRIAF
Subjt:  FVINKLKFELLVDFMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF

Query:  IEFFVKPEEDTTDD
        IEFFVKPEEDTT+D
Subjt:  IEFFVKPEEDTTDD

A0A6J1GZY3 uncharacterized protein LOC111459157 isoform X1

2.0e-167

95.86

Show/hide

Query:  MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQAW
        LSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQ  
Subjt:  LSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQAW

Query:  FVINKLKFELLVDFMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF
                   VDFMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF
Subjt:  FVINKLKFELLVDFMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF

Query:  IEFFVKPEEDTTDD
        IEFFVKPEEDTTDD
Subjt:  IEFFVKPEEDTTDD

A0A6J1K1L0 uncharacterized protein LOC111491589 isoform X1

9.2e-165

94.59

Show/hide

Query:  MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVDA++PDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQAW
        LSIVEIKYPGPDMQLLLKSVDS DACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQ  
Subjt:  LSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQAW

Query:  FVINKLKFELLVDFMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF
                   VDFMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQ SRIAF
Subjt:  FVINKLKFELLVDFMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF

Query:  IEFFVKPEEDTTDD
        IEFFVKPEEDTTDD
Subjt:  IEFFVKPEEDTTDD

SwissProt top hits

e value

%identity

Alignment

Q9QWZ1 Cell cycle checkpoint protein RAD1

4.7e-17

Show/hide

Query:  LVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFS---VPGRLSIVEIKYP
        LV  LDNV+ L     A+ ++ H  A    +++GI + VE + C+QA  ++Q +VF  +    ++   F ++L I +D L+ F     PG L+ + + Y 
Subjt:  LVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFS---VPGRLSIVEIKYP

Query:  GPDMQLLLKSVDSSDACIYAEIRTRIP-ETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSV---TFKGEGHGDLQAWFVINK
        G    L+L  ++        +I T+ P ET+ +D+    + +      ++S  L+EA  +L+  G  +QI++ P  P     TF   G+  L        
Subjt:  GPDMQLLLKSVDSSDACIYAEIRTRIP-ETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSV---TFKGEGHGDLQAWFVINK

Query:  LKFELLVDFMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAFIEFFV
                  Y  ++DL+ +FHCD+    RYK   L+ +T  +  S     + S  T  R G L +Q+++                  +  +I F+E++ 
Subjt:  LKFELLVDFMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAFIEFFV

Query:  KPEEDTTD
         P+E+  +
Subjt:  KPEEDTTD

Arabidopsis top hits

e value

%identity

Alignment

AT4G17760.1 damaged DNA binding;exodeoxyribonuclease IIIs

1.3e-134

74.03

Show/hide

Query:  SSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRL
        SS A++ D+PDL+CQLDNVQG+VDA T VRWKRHQDA++ELSEHGIVLIVEESGCLQAKVYLQRE+F +YEY AQ RPRFG+SLG+ VD LNTFS PG  
Subjt:  SSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRL

Query:  SIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQAWF
        + +EIKYPGPDM+LLLKSVD+ ++CIY+EIRTRIPET++WDYNFE AG +PL+FTVKSAALKEAIDDLEWPGSSVQISL+  PP V F+GEGHGDLQ   
Subjt:  SIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQAWF

Query:  VINKLKFELLVDFMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAFI
                  +DFMYYANTDLL++FHCD  VSY YKYKFL+ATT+NIP +V+RENRGSKLTIGRGGMLKVQHLVSV++     P ++SAGYQ PSRIA+I
Subjt:  VINKLKFELLVDFMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAFI

Query:  EFFVKPEE
        EFFVKPEE
Subjt:  EFFVKPEE

AT4G17760.2 damaged DNA binding;exodeoxyribonuclease IIIs

5.4e-109

73.15

Show/hide

Query:  ESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGSSP
        ESGCLQAKVYLQRE+F +YEY AQ RPRFG+SLG+ VD LNTFS PG  + +EIKYPGPDM+LLLKSVD+ ++CIY+EIRTRIPET++WDYNFE AG +P
Subjt:  ESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGSSP

Query:  LSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQAWFVINKLKFELLVDFMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSV
        L+FTVKSAALKEAIDDLEWPGSSVQISL+  PP V F+GEGHGDLQ             +DFMYYANTDLL++FHCD  VSY YKYKFL+ATT+NIP +V
Subjt:  LSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQAWFVINKLKFELLVDFMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSV

Query:  IRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAFIEFFVKPEE
        +RENRGSKLTIGRGGMLKVQHLVSV++     P ++SAGYQ PSRIA+IEFFVKPEE
Subjt:  IRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAFIEFFVKPEE

Sequences

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CDS sequence

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ATGAGCTCATCGGCGGTGGATGCGGATTCCCCCGATCTGGTTTGTCAACTTGACAACGTCCAAGGTCTGGTGGATGCATTCACTGCCGTTCGATGGAAACGCCATCAGGA
TGCCGTAATCGAACTGTCAGAGCATGGCATCGTTTTGATCGTTGAAGAATCAGGCTGTCTTCAGGCGAAAGTGTATCTGCAGCGTGAGGTTTTCATTCGTTATGAATACA
GTGCACAAGCTCGGCCAAGGTTTGGAGTGAGCTTAGGCATTTTTGTTGATAGCTTGAACACATTTTCTGTTCCTGGACGTTTAAGCATCGTTGAAATCAAATACCCGGGA
CCTGACATGCAACTTCTGCTCAAGTCAGTTGATTCATCAGATGCGTGTATTTATGCGGAGATCCGAACCAGAATCCCAGAAACGATTTCATGGGATTACAATTTTGAACC
TGCAGGAAGTAGCCCACTCAGTTTCACTGTCAAGTCTGCAGCTCTGAAGGAAGCTATTGATGATCTTGAATGGCCTGGATCAAGCGTCCAGATATCTCTAGAACCATCTC
CCCCTTCTGTCACCTTCAAAGGAGAAGGTCATGGAGACTTGCAGGCATGGTTTGTCATAAACAAACTGAAATTTGAACTCCTTGTAGATTTCATGTACTATGCAAACACT
GATCTTTTGATCTCGTTCCATTGCGATCGTCCGGTGTCCTACAGGTACAAATACAAATTTCTACGAGCGACAACTTCGAACATACCGAGCAGTGTGATCAGAGAAAATAG
GGGAAGCAAGTTGACTATTGGGAGAGGAGGAATGCTAAAAGTTCAGCACCTGGTTTCTGTGGCAAGACCCTCCACTTCACACCCACATATAGATTCTGCTGGTTATCAGC
AACCCAGTAGAATTGCTTTCATTGAGTTCTTTGTAAAACCAGAAGAAGACACCACAGATGATTAG

mRNA sequence

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Protein sequence

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MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLSIVEIKYPG
PDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQAWFVINKLKFELLVDFMYYANT
DLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAFIEFFVKPEEDTTDD

CmoCh02G009240 (gene) of Cucurbita moschata (Rifu) v1 genome