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CmoCh02G009570 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G009570
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr02:5871209..5871739
RNA-Seq ExpressionCmoCh02G009570
SyntenyCmoCh02G009570
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605612.1 Granule-bound starch synthase 1, chloroplastic/amyloplastic, partial [Cucurbita argyrosperma subsp. sororia]4.6e-30100Show/hide
Query:  MKGTCTLLASVLAASTMAFSSSSSSSSGDRDLALYPPSLEGSVSDSRANRGCGSDSSSEKEKFAPRFDGLKFIETL
        MKGTCTLLASVLAASTMAFSSSSSSSSGDRDLALYPPSLEGSVSDSRANRGCGSDSSSEKEKFAPRFDGLKFIETL
Subjt:  MKGTCTLLASVLAASTMAFSSSSSSSSGDRDLALYPPSLEGSVSDSRANRGCGSDSSSEKEKFAPRFDGLKFIETL

KAG7035524.1 hypothetical protein SDJN02_02320 [Cucurbita argyrosperma subsp. argyrosperma]2.2e-3298.77Show/hide
Query:  MKGTCTLLASVLAASTMAFSSSSSSSSGDRDLALYPPSLEGSVSDSRANRGCGSDSSSEKEKFAPRFDGLKFIETLVTAHR
        MKGTCTLLASVLAASTMAFSSSSSSSSGDRDLALYPPSLEGSVSDS ANRGCGSDSSSEKEKFAPRFDGLKFIETLVTAHR
Subjt:  MKGTCTLLASVLAASTMAFSSSSSSSSGDRDLALYPPSLEGSVSDSRANRGCGSDSSSEKEKFAPRFDGLKFIETLVTAHR

XP_008437456.1 PREDICTED: uncharacterized protein LOC103482871 [Cucumis melo]1.2e-2585.19Show/hide
Query:  MKGTCTLLASVLAASTMAFSSSSSSSSGDRDLALYPPSLEGSVSDSRANRGCGSDSSSEKEKFAPRFDGLKFIETLVTAHR
        MKG+CTLLASVLAASTMAF SSSSSS+GDRDL LYPPS +G V +S ANRGCG+DSSSEKEKFAPRFDGL+FIETLVTAHR
Subjt:  MKGTCTLLASVLAASTMAFSSSSSSSSGDRDLALYPPSLEGSVSDSRANRGCGSDSSSEKEKFAPRFDGLKFIETLVTAHR

XP_022929045.1 uncharacterized protein LOC111435756 [Cucurbita moschata]1.1e-2686.42Show/hide
Query:  MKGTCTLLASVLAASTMAFSSSSSSSSGDRDLALYPPSLEGSVSDSRANRGCGSDSSSEKEKFAPRFDGLKFIETLVTAHR
        MKG+CTLLASVLAASTMAFSSSSSSS+ DRDLAL PPS EG VS+S +NRGCGSDSS+EKEKFAPRFDGL+FIETLVTAHR
Subjt:  MKGTCTLLASVLAASTMAFSSSSSSSSGDRDLALYPPSLEGSVSDSRANRGCGSDSSSEKEKFAPRFDGLKFIETLVTAHR

XP_023520500.1 uncharacterized protein LOC111783920 [Cucurbita pepo subsp. pepo]2.4e-2685.19Show/hide
Query:  MKGTCTLLASVLAASTMAFSSSSSSSSGDRDLALYPPSLEGSVSDSRANRGCGSDSSSEKEKFAPRFDGLKFIETLVTAHR
        MKG+CTLLASVLAASTMAFSSSSSSS+ DRDLAL PPS EG VS+S +NRGCGSD+S+EKEKFAPRFDGL+FIETLVTAHR
Subjt:  MKGTCTLLASVLAASTMAFSSSSSSSSGDRDLALYPPSLEGSVSDSRANRGCGSDSSSEKEKFAPRFDGLKFIETLVTAHR

TrEMBL top hitse value%identityAlignment
A0A0A0KQK5 Uncharacterized protein6.3e-2583.33Show/hide
Query:  MKGTCTLLASVLAASTMAFSSSSSSSS---GDRDLALYPPSLEGSVSDSRANRGCGSDSSSEKEKFAPRFDGLKFIETLVTAHR
        MKG+CTLLASVLAASTMAFSSSSSSSS   GDRDL LY  S +G VS+S ANRGCG+DSSSEKEKFAPRFDGL+FIETLVTAHR
Subjt:  MKGTCTLLASVLAASTMAFSSSSSSSS---GDRDLALYPPSLEGSVSDSRANRGCGSDSSSEKEKFAPRFDGLKFIETLVTAHR

A0A1S3AU25 uncharacterized protein LOC1034828715.7e-2685.19Show/hide
Query:  MKGTCTLLASVLAASTMAFSSSSSSSSGDRDLALYPPSLEGSVSDSRANRGCGSDSSSEKEKFAPRFDGLKFIETLVTAHR
        MKG+CTLLASVLAASTMAF SSSSSS+GDRDL LYPPS +G V +S ANRGCG+DSSSEKEKFAPRFDGL+FIETLVTAHR
Subjt:  MKGTCTLLASVLAASTMAFSSSSSSSSGDRDLALYPPSLEGSVSDSRANRGCGSDSSSEKEKFAPRFDGLKFIETLVTAHR

A0A5A7TMP9 Uncharacterized protein4.1e-2476.92Show/hide
Query:  MKGTCTLLASVLAASTMAFSSSSSSSSGDRDLALYPPSLE----------GSVSDSRANRGCGSDSSSEKEKFAPRFDGLKFIETLVTAHR
        MKG+CTLLASVLAASTMAF SSSSSS+GDRDL LYPPS +          G VS+S ANRGCG+DSSSEKEKFAPRFDGL+FIETLVTAHR
Subjt:  MKGTCTLLASVLAASTMAFSSSSSSSSGDRDLALYPPSLE----------GSVSDSRANRGCGSDSSSEKEKFAPRFDGLKFIETLVTAHR

A0A6J1ET49 uncharacterized protein LOC1114357565.2e-2786.42Show/hide
Query:  MKGTCTLLASVLAASTMAFSSSSSSSSGDRDLALYPPSLEGSVSDSRANRGCGSDSSSEKEKFAPRFDGLKFIETLVTAHR
        MKG+CTLLASVLAASTMAFSSSSSSS+ DRDLAL PPS EG VS+S +NRGCGSDSS+EKEKFAPRFDGL+FIETLVTAHR
Subjt:  MKGTCTLLASVLAASTMAFSSSSSSSSGDRDLALYPPSLEGSVSDSRANRGCGSDSSSEKEKFAPRFDGLKFIETLVTAHR

A0A6J1HZR1 uncharacterized protein LOC1114691105.2e-2786.42Show/hide
Query:  MKGTCTLLASVLAASTMAFSSSSSSSSGDRDLALYPPSLEGSVSDSRANRGCGSDSSSEKEKFAPRFDGLKFIETLVTAHR
        MKG+CTLLASVLAASTMAFSSSSSSS+ DRDLAL PPS EG VS+S +NRGCGSDSS+EKEKFAPRFDGL+FIETLVTAHR
Subjt:  MKGTCTLLASVLAASTMAFSSSSSSSSGDRDLALYPPSLEGSVSDSRANRGCGSDSSSEKEKFAPRFDGLKFIETLVTAHR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G28290.1 unknown protein1.3e-0642.67Show/hide
Query:  VLAASTMAFSSSSSSSSGDRDLALYPPSLEGSVSDSRA----NRGCGSDSSSEKEKFAPRFDGLKFIETLVTAHR
        ++AAS    +S+++ S+G  + ++   S E ++S   A     +  GS      EKFAPRFDGL+FIETLVTAHR
Subjt:  VLAASTMAFSSSSSSSSGDRDLALYPPSLEGSVSDSRA----NRGCGSDSSSEKEKFAPRFDGLKFIETLVTAHR

AT5G42110.1 unknown protein2.9e-0644.44Show/hide
Query:  MKGTCTLLASVLAASTMAFSSSSSSSSGDRDLALYPPSLEGSVSDSRANRGCGSDSSSEKEKFAPRFDGLKFIETLVTAHR
        MK +  ++ASV+A ST A SSSS          + PP +   V +SR   G         + F PRFDGL+FIETLVTAHR
Subjt:  MKGTCTLLASVLAASTMAFSSSSSSSSGDRDLALYPPSLEGSVSDSRANRGCGSDSSSEKEKFAPRFDGLKFIETLVTAHR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGGCACCTGCACGTTGCTCGCCTCTGTCCTCGCAGCCTCGACCATGGCTTTCTCCTCGTCTTCGTCGTCCTCTAGTGGAGATCGCGACCTCGCTCTTTATCCTCC
CTCTCTAGAGGGCTCCGTTTCGGATTCTCGTGCGAACAGAGGTTGCGGCTCGGATTCATCATCGGAGAAGGAGAAGTTTGCGCCGAGGTTCGATGGATTGAAATTCATTG
AGACTTTGGTAACTGCTCATAGATAA
mRNA sequenceShow/hide mRNA sequence
ACACATGAAAACACGCGAGCCGCTGAATATAAAAAAGAGACCTCCCCTCTTTCCCACAATTTCTGCGCCGCTTGTGTAGAATTTCATTGTCGATCCTTTCCTCCATTCCC
TCAAGTCGGCCGAGATCCGGCTACTCGTCGGATTTCGCCCTCGTACGTCCTGTCCACCACCTGCTCCGACGAACCATGAAAGGCACCTGCACGTTGCTCGCCTCTGTCCT
CGCAGCCTCGACCATGGCTTTCTCCTCGTCTTCGTCGTCCTCTAGTGGAGATCGCGACCTCGCTCTTTATCCTCCCTCTCTAGAGGGCTCCGTTTCGGATTCTCGTGCGA
ACAGAGGTTGCGGCTCGGATTCATCATCGGAGAAGGAGAAGTTTGCGCCGAGGTTCGATGGATTGAAATTCATTGAGACTTTGGTAACTGCTCATAGATAA
Protein sequenceShow/hide protein sequence
MKGTCTLLASVLAASTMAFSSSSSSSSGDRDLALYPPSLEGSVSDSRANRGCGSDSSSEKEKFAPRFDGLKFIETLVTAHR