; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh02G009700 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G009700
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionTumor necrosis factor receptor family protein
Genome locationCmo_Chr02:5949150..5952599
RNA-Seq ExpressionCmoCh02G009700
SyntenyCmoCh02G009700
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605625.1 hypothetical protein SDJN03_02942, partial [Cucurbita argyrosperma subsp. sororia]9.6e-7797.42Show/hide
Query:  MWWLRGIQTIRNADGGGGSAGLVFSTFTRYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRG
        MWWLRGIQTIRNADGGGGSAGLVFSTF R FSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRG
Subjt:  MWWLRGIQTIRNADGGGGSAGLVFSTFTRYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRG

Query:  RKMLQLFCNQVGSNKKFLLATPDDPRAEELKSASEPVVQRRKKQKAQIRRRKASK
        RKMLQLFCNQVGSNKKFLLATP+DPR EELKSASEPVVQRRKKQKAQIRRRKASK
Subjt:  RKMLQLFCNQVGSNKKFLLATPDDPRAEELKSASEPVVQRRKKQKAQIRRRKASK

KAG7035535.1 hypothetical protein SDJN02_02332 [Cucurbita argyrosperma subsp. argyrosperma]8.7e-7898.06Show/hide
Query:  MWWLRGIQTIRNADGGGGSAGLVFSTFTRYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRG
        MWWLRGIQTIRNADGGGGSAGLVFSTF RYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRG
Subjt:  MWWLRGIQTIRNADGGGGSAGLVFSTFTRYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRG

Query:  RKMLQLFCNQVGSNKKFLLATPDDPRAEELKSASEPVVQRRKKQKAQIRRRKASK
        RKMLQLFCNQVGSNKKFLLATP+DPR EELKSASEPVVQRRKKQKAQIRRRKASK
Subjt:  RKMLQLFCNQVGSNKKFLLATPDDPRAEELKSASEPVVQRRKKQKAQIRRRKASK

XP_022958708.1 uncharacterized protein LOC111459852 [Cucurbita moschata]2.1e-79100Show/hide
Query:  MWWLRGIQTIRNADGGGGSAGLVFSTFTRYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRG
        MWWLRGIQTIRNADGGGGSAGLVFSTFTRYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRG
Subjt:  MWWLRGIQTIRNADGGGGSAGLVFSTFTRYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRG

Query:  RKMLQLFCNQVGSNKKFLLATPDDPRAEELKSASEPVVQRRKKQKAQIRRRKASK
        RKMLQLFCNQVGSNKKFLLATPDDPRAEELKSASEPVVQRRKKQKAQIRRRKASK
Subjt:  RKMLQLFCNQVGSNKKFLLATPDDPRAEELKSASEPVVQRRKKQKAQIRRRKASK

XP_022996189.1 uncharacterized protein LOC111491495 [Cucurbita maxima]1.9e-7797.42Show/hide
Query:  MWWLRGIQTIRNADGGGGSAGLVFSTFTRYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRG
        MWWLRGIQTIRNADGGGGSAGLVFSTF RYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRG
Subjt:  MWWLRGIQTIRNADGGGGSAGLVFSTFTRYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRG

Query:  RKMLQLFCNQVGSNKKFLLATPDDPRAEELKSASEPVVQRRKKQKAQIRRRKASK
        RKMLQLFCNQVGSNKKFLLATP+DPRAEELKSASEPVVQRRKKQKA+IRR+KASK
Subjt:  RKMLQLFCNQVGSNKKFLLATPDDPRAEELKSASEPVVQRRKKQKAQIRRRKASK

XP_023534502.1 uncharacterized protein LOC111796041 [Cucurbita pepo subsp. pepo]2.8e-7696.82Show/hide
Query:  MWWLRGIQTIRNAD--GGGGSAGLVFSTFTRYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWM
        MWWLRGIQTIRNAD  GGGGSAGLVFSTF RYFSRSRAENLRKINPKLTP EASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWM
Subjt:  MWWLRGIQTIRNAD--GGGGSAGLVFSTFTRYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWM

Query:  RGRKMLQLFCNQVGSNKKFLLATPDDPRAEELKSASEPVVQRRKKQKAQIRRRKASK
        RGRKMLQLFCNQVGSNKKFLLATPDDPRAEELKSASEPVVQRRKKQKAQIRRRK SK
Subjt:  RGRKMLQLFCNQVGSNKKFLLATPDDPRAEELKSASEPVVQRRKKQKAQIRRRKASK

TrEMBL top hitse value%identityAlignment
A0A0A0KK52 Uncharacterized protein5.5e-6281.05Show/hide
Query:  WLRGIQTIRNADGGGGSAGLVFSTFTRYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRK
        W R IQ I NADGGGG AGLVF+TF R+FSR RAENLRKINPKLTPQEASLVAQDLYGVV+QHGPLT+SNAWIKAQESGV GLNSKTHMKLLLKWMRGRK
Subjt:  WLRGIQTIRNADGGGGSAGLVFSTFTRYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRK

Query:  MLQLFCNQVGSNKKFLLATPDDPRAEELKSASEPVVQRRKKQKAQIRRRKASK
        ML LFC+ VGSNKKFLL TPDDPRAEELK++SE   QR+K+ K+  +RRK SK
Subjt:  MLQLFCNQVGSNKKFLLATPDDPRAEELKSASEPVVQRRKKQKAQIRRRKASK

A0A1S3ATS9 uncharacterized protein LOC1034828883.0e-6079.08Show/hide
Query:  WLRGIQTIRNADGGGGSAGLVFSTFTRYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRK
        W R IQ I N DGGGG  GLVF+TF R+FSR RAENLRKINPKLTPQEASLVAQDLYGV++QHGPLTVSNAWIKAQESGV GLNSKTHMKLLLKWMRGR+
Subjt:  WLRGIQTIRNADGGGGSAGLVFSTFTRYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRK

Query:  MLQLFCNQVGSNKKFLLATPDDPRAEELKSASEPVVQRRKKQKAQIRRRKASK
        ML LFC+ VGSNKKFLL TPDDPRAEELK+ SE   QR+K+ K+  +RRK SK
Subjt:  MLQLFCNQVGSNKKFLLATPDDPRAEELKSASEPVVQRRKKQKAQIRRRKASK

A0A6J1E538 uncharacterized protein LOC1110261271.2e-6181.82Show/hide
Query:  WLRGIQTIRNADGGGGSAGLVFSTFTRYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRK
        WLRG Q I +ADGGGGSAGLVFSTF RYFSR RAENLRKINPKLTPQEASLVAQDLYGVVKQHGPL++SNAWIKAQE GV GLNSKTHMKL+LKWMRGRK
Subjt:  WLRGIQTIRNADGGGGSAGLVFSTFTRYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRK

Query:  MLQLFCNQVGSNKKFLLAT-PDDPRAEELKSASEPVVQRRKKQKAQIRRRKASK
        ML+L CNQVGSNKKFLL+T PDDP+A++LKS+SE  VQR K+ K   RRRK SK
Subjt:  MLQLFCNQVGSNKKFLLAT-PDDPRAEELKSASEPVVQRRKKQKAQIRRRKASK

A0A6J1H3U5 uncharacterized protein LOC1114598521.0e-79100Show/hide
Query:  MWWLRGIQTIRNADGGGGSAGLVFSTFTRYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRG
        MWWLRGIQTIRNADGGGGSAGLVFSTFTRYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRG
Subjt:  MWWLRGIQTIRNADGGGGSAGLVFSTFTRYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRG

Query:  RKMLQLFCNQVGSNKKFLLATPDDPRAEELKSASEPVVQRRKKQKAQIRRRKASK
        RKMLQLFCNQVGSNKKFLLATPDDPRAEELKSASEPVVQRRKKQKAQIRRRKASK
Subjt:  RKMLQLFCNQVGSNKKFLLATPDDPRAEELKSASEPVVQRRKKQKAQIRRRKASK

A0A6J1K817 uncharacterized protein LOC1114914959.4e-7897.42Show/hide
Query:  MWWLRGIQTIRNADGGGGSAGLVFSTFTRYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRG
        MWWLRGIQTIRNADGGGGSAGLVFSTF RYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRG
Subjt:  MWWLRGIQTIRNADGGGGSAGLVFSTFTRYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRG

Query:  RKMLQLFCNQVGSNKKFLLATPDDPRAEELKSASEPVVQRRKKQKAQIRRRKASK
        RKMLQLFCNQVGSNKKFLLATP+DPRAEELKSASEPVVQRRKKQKA+IRR+KASK
Subjt:  RKMLQLFCNQVGSNKKFLLATPDDPRAEELKSASEPVVQRRKKQKAQIRRRKASK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G73940.1 unknown protein5.3e-3352.03Show/hide
Query:  ADGGGG-----SAGLVF-------STFTRYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRG
        A GGGG      A  +F       S   RY SR RA N+RKINPK+  QEA  ++  LY + K HGPL+V N W++AQE+GV GLNSKTHMKLLLKWMRG
Subjt:  ADGGGG-----SAGLVF-------STFTRYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRG

Query:  RKMLQLFCNQVGSNKKFL-LATPDDPRAEELKSASEPVVQRRKKQKAQ
        +KML+L CNQVGS+KKF     P+DP  E+  +  E   Q  KK++++
Subjt:  RKMLQLFCNQVGSNKKFL-LATPDDPRAEELKSASEPVVQRRKKQKAQ

AT5G49410.1 unknown protein2.2e-1837.37Show/hide
Query:  VFSTFTRYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLAT
        V    TR+F+      ++ I     P++   + + ++ ++K HGPLT++  W + +E G+ GL SK HMK++L+WMR R+ L+L CN VG +K+FL  T
Subjt:  VFSTFTRYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLAT

AT5G49410.2 unknown protein2.2e-1837.37Show/hide
Query:  VFSTFTRYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLAT
        V    TR+F+      ++ I     P++   + + ++ ++K HGPLT++  W + +E G+ GL SK HMK++L+WMR R+ L+L CN VG +K+FL  T
Subjt:  VFSTFTRYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLAT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGTGGCTTCGCGGTATTCAAACAATTAGAAATGCAGATGGAGGTGGAGGTTCTGCTGGCCTTGTTTTCAGCACATTCACGAGGTATTTCTCGAGGTCGCGAGCAGA
GAATCTTAGGAAAATCAATCCCAAGTTGACCCCTCAGGAGGCTTCTTTGGTTGCTCAAGATCTCTATGGTGTCGTCAAGCAGCATGGACCGCTCACAGTTTCCAATGCTT
GGATTAAAGCCCAGGAATCTGGCGTGGGTGGATTGAACAGCAAAACACACATGAAGCTGTTGCTGAAATGGATGAGGGGAAGGAAGATGCTGCAGCTTTTCTGCAACCAA
GTTGGTTCGAACAAGAAATTTCTGCTCGCCACGCCCGATGATCCTCGAGCAGAAGAGTTGAAGAGTGCTTCAGAACCAGTAGTCCAGAGACGAAAGAAACAGAAGGCACA
AATAAGGAGGAGAAAGGCATCGAAATAA
mRNA sequenceShow/hide mRNA sequence
GATCTCCATCATAATTCACAAGTGAAGAAAAACCCTGCGTGTCTAATTCTGTTCGTTCGTCGTCGACTCTCTTCGAATCTCAGTGCCTTGGCGGCAGCGGGGTACCAGTG
CAACAGCGCGCAGTTGTAGCCATAGACGAATAGTGGGAGAATTTTGTACCACGAAGTAGCGCGGTAGACTAGCATCAGATATGTGGTGGCTTCGCGGTATTCAAACAATT
AGAAATGCAGATGGAGGTGGAGGTTCTGCTGGCCTTGTTTTCAGCACATTCACGAGGTATTTCTCGAGGTCGCGAGCAGAGAATCTTAGGAAAATCAATCCCAAGTTGAC
CCCTCAGGAGGCTTCTTTGGTTGCTCAAGATCTCTATGGTGTCGTCAAGCAGCATGGACCGCTCACAGTTTCCAATGCTTGGATTAAAGCCCAGGAATCTGGCGTGGGTG
GATTGAACAGCAAAACACACATGAAGCTGTTGCTGAAATGGATGAGGGGAAGGAAGATGCTGCAGCTTTTCTGCAACCAAGTTGGTTCGAACAAGAAATTTCTGCTCGCC
ACGCCCGATGATCCTCGAGCAGAAGAGTTGAAGAGTGCTTCAGAACCAGTAGTCCAGAGACGAAAGAAACAGAAGGCACAAATAAGGAGGAGAAAGGCATCGAAATAAAC
TTTTGCCAACGTCCATGAGTTTACGATGCAGTCGATGGACTACCCTCGGACTTGTTAGTACTGATGGCAGGCTCACGACTTATGACGATGAATTTATGAGTTTCTGCCAT
TCACTGTTTTCCCCCAAATTTCAACTCTTTTGGGTGTTATGCAAGGTTTCTTTTGAACATTTCACGTTGACTTGGTTTCCATGCATTGACTGACAAACATGCATTTGAAT
CGTGGTTGATAAAAAATTAAGTCAAATAAAAATCTTGAATTTTTAAAATATGACAAAATTTAAAATCAAATTTATCT
Protein sequenceShow/hide protein sequence
MWWLRGIQTIRNADGGGGSAGLVFSTFTRYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQ
VGSNKKFLLATPDDPRAEELKSASEPVVQRRKKQKAQIRRRKASK