; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh02G009920 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G009920
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionKri1_C domain-containing protein
Genome locationCmo_Chr02:6097347..6097850
RNA-Seq ExpressionCmoCh02G009920
SyntenyCmoCh02G009920
Gene Ontology termsGO:0000447 - endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0030686 - 90S preribosome (cellular component)
InterPro domainsIPR018034 - KRR1 interacting protein 1
IPR024626 - Kri1-like, C-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646722.1 hypothetical protein Csa_005044 [Cucumis sativus]2.0e-5684.56Show/hide
Query:  EKPDFEKEDELLGLPRGWASSESGDGFLAARERSLEHKIDSDLSNVDNEEEVEEHGSEDEQGKRKRKRKLSLYTKAKEVMMEEYYKLDYEDTIGDLKARF
        EKPDF+KEDELLGLP+GW SSESGDGF AARERSL HKID+D+SN DNEE+ EE G+EDE+G RKRKRKLSLY KAKE MMEEYYKLDYEDT+GDLK RF
Subjt:  EKPDFEKEDELLGLPRGWASSESGDGFLAARERSLEHKIDSDLSNVDNEEEVEEHGSEDEQGKRKRKRKLSLYTKAKEVMMEEYYKLDYEDTIGDLKARF

Query:  KYAKIRPNRYGLSTAEIMALDDKELNQFVSMKKLAP
        KYAKI+PNRYGLSTAEI+A+DDKELNQFVSMKKLAP
Subjt:  KYAKIRPNRYGLSTAEIMALDDKELNQFVSMKKLAP

KAG6605645.1 Protein KRI1-like protein, partial [Cucurbita argyrosperma subsp. sororia]3.8e-6395.59Show/hide
Query:  RGWASSESGDGFLAARERSLEHKIDSDLSNVDNEEEVEEHGSEDEQGKRKRKRKLSLYTKAKEVMMEEYYKLDYEDTIGDLKARFKYAKIRPNRYGLSTA
        RGWASSE+GDGFLAARERSLEHKIDSDLSN DNEEE EEHGSEDEQGKRKRKRKLSLYTKAKEVMMEEYYKLDYEDTI DLKARFKYAKIRPNRYGLSTA
Subjt:  RGWASSESGDGFLAARERSLEHKIDSDLSNVDNEEEVEEHGSEDEQGKRKRKRKLSLYTKAKEVMMEEYYKLDYEDTIGDLKARFKYAKIRPNRYGLSTA

Query:  EIMALDDKELNQFVSMKKLAPCTRKNGRCQIVLDSA
        EIMALDDKELNQFVSMKKLAP TRKNGRCQIVLDS+
Subjt:  EIMALDDKELNQFVSMKKLAPCTRKNGRCQIVLDSA

KAG7035554.1 Protein KRI1-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-6296.3Show/hide
Query:  GWASSESGDGFLAARERSLEHKIDSDLSNVDNEEEVEEHGSEDEQGKRKRKRKLSLYTKAKEVMMEEYYKLDYEDTIGDLKARFKYAKIRPNRYGLSTAE
        GWASSESGDGFLAARERSLEHKIDSDLSN DNEEE EEHGSEDEQGKRKRKRKLSLYTKAKEVMMEEYYKLDYEDTIGDLKARFKYAKIRPNRYGLSTAE
Subjt:  GWASSESGDGFLAARERSLEHKIDSDLSNVDNEEEVEEHGSEDEQGKRKRKRKLSLYTKAKEVMMEEYYKLDYEDTIGDLKARFKYAKIRPNRYGLSTAE

Query:  IMALDDKELNQFVSMKKLAPCTRKNGRCQIVLDSA
        IMALDDKELNQFVSMKKLAP TRKNGR QIVLDS+
Subjt:  IMALDDKELNQFVSMKKLAPCTRKNGRCQIVLDSA

XP_022154931.1 protein KRI1 homolog [Momordica charantia]2.0e-5685.4Show/hide
Query:  IEKPDFEKEDELLGLPRGWASSESGDGFLAARERSLEHKIDSDLSNVDNEEEVEEHGSEDEQGKRKRKRKLSLYTKAKEVMMEEYYKLDYEDTIGDLKAR
        IEKPDF+KEDELLGLP+ WASS SGDGFLAARERSL+HKID+DL+  DNE+EVEEH SE+E+GKRKRKRKLSLY KAKE MMEEYYKLDYEDTIGDLK R
Subjt:  IEKPDFEKEDELLGLPRGWASSESGDGFLAARERSLEHKIDSDLSNVDNEEEVEEHGSEDEQGKRKRKRKLSLYTKAKEVMMEEYYKLDYEDTIGDLKAR

Query:  FKYAKIRPNRYGLSTAEIMALDDKELNQFVSMKKLAP
        FKYAKI  NRYGLSTAEIMA+DDKELNQFVS+KKLAP
Subjt:  FKYAKIRPNRYGLSTAEIMALDDKELNQFVSMKKLAP

XP_038898725.1 protein KRI1 homolog [Benincasa hispida]4.1e-5785.4Show/hide
Query:  IEKPDFEKEDELLGLPRGWASSESGDGFLAARERSLEHKIDSDLSNVDNEEEVEEHGSEDEQGKRKRKRKLSLYTKAKEVMMEEYYKLDYEDTIGDLKAR
        IEKPDF+KEDELLGLP+GWASSE GDGFLAAR+RSL HK+DSD+SN DNEE+ EE  +EDE+GKRKRKRKLSLY KAKE +MEEYYKLDYEDT+GDLK R
Subjt:  IEKPDFEKEDELLGLPRGWASSESGDGFLAARERSLEHKIDSDLSNVDNEEEVEEHGSEDEQGKRKRKRKLSLYTKAKEVMMEEYYKLDYEDTIGDLKAR

Query:  FKYAKIRPNRYGLSTAEIMALDDKELNQFVSMKKLAP
        FKYAKIRPNRYGLSTAEI+ALDDKELNQFVSMKKLAP
Subjt:  FKYAKIRPNRYGLSTAEIMALDDKELNQFVSMKKLAP

TrEMBL top hitse value%identityAlignment
A0A0A0KYR7 Kri1_C domain-containing protein1.1e-5583.09Show/hide
Query:  EKPDFEKEDELLGLPRGWASSESGDGFLAARERSLEHKIDSDLSNVDNEEEVEEHGSEDEQGKRKRKRKLSLYTKAKEVMMEEYYKLDYEDTIGDLKARF
        EKPDF+KEDELLGLP+GW SSESGDGF AAR+RSL HKID+D+SN DNEE+ EE G+EDE+G RKRKRKLSLY KAKE MMEEYYKLDYEDT+GDLK RF
Subjt:  EKPDFEKEDELLGLPRGWASSESGDGFLAARERSLEHKIDSDLSNVDNEEEVEEHGSEDEQGKRKRKRKLSLYTKAKEVMMEEYYKLDYEDTIGDLKARF

Query:  KYAKIRPNRYGLSTAEIMALDDKELNQFVSMKKLAP
        KYAKI+PNRYGLST EI+A+DDKELNQFVSMKKLAP
Subjt:  KYAKIRPNRYGLSTAEIMALDDKELNQFVSMKKLAP

A0A1S3CSL8 LOW QUALITY PROTEIN: protein KRI1 homolog2.9e-5683.09Show/hide
Query:  EKPDFEKEDELLGLPRGWASSESGDGFLAARERSLEHKIDSDLSNVDNEEEVEEHGSEDEQGKRKRKRKLSLYTKAKEVMMEEYYKLDYEDTIGDLKARF
        EKPDF+KEDELLGLP+GW SSESGDGF AAR+RSL HK+D+D+SN DNEE+ EE G+EDE+G RKRKRKLSLY KAKE MMEEYYKLDYEDT+GDLK RF
Subjt:  EKPDFEKEDELLGLPRGWASSESGDGFLAARERSLEHKIDSDLSNVDNEEEVEEHGSEDEQGKRKRKRKLSLYTKAKEVMMEEYYKLDYEDTIGDLKARF

Query:  KYAKIRPNRYGLSTAEIMALDDKELNQFVSMKKLAP
        KYAKI+PNRYGLSTAEI+A+DDKELNQFVSMKKLAP
Subjt:  KYAKIRPNRYGLSTAEIMALDDKELNQFVSMKKLAP

A0A5A7TRL8 Protein KRI1-like protein2.9e-5683.09Show/hide
Query:  EKPDFEKEDELLGLPRGWASSESGDGFLAARERSLEHKIDSDLSNVDNEEEVEEHGSEDEQGKRKRKRKLSLYTKAKEVMMEEYYKLDYEDTIGDLKARF
        EKPDF+KEDELLGLP+GW SSESGDGF AAR+RSL HK+D+D+SN DNEE+ EE G+EDE+G RKRKRKLSLY KAKE MMEEYYKLDYEDT+GDLK RF
Subjt:  EKPDFEKEDELLGLPRGWASSESGDGFLAARERSLEHKIDSDLSNVDNEEEVEEHGSEDEQGKRKRKRKLSLYTKAKEVMMEEYYKLDYEDTIGDLKARF

Query:  KYAKIRPNRYGLSTAEIMALDDKELNQFVSMKKLAP
        KYAKI+PNRYGLSTAEI+A+DDKELNQFVSMKKLAP
Subjt:  KYAKIRPNRYGLSTAEIMALDDKELNQFVSMKKLAP

A0A6J1DQ63 protein KRI1 homolog9.9e-5785.4Show/hide
Query:  IEKPDFEKEDELLGLPRGWASSESGDGFLAARERSLEHKIDSDLSNVDNEEEVEEHGSEDEQGKRKRKRKLSLYTKAKEVMMEEYYKLDYEDTIGDLKAR
        IEKPDF+KEDELLGLP+ WASS SGDGFLAARERSL+HKID+DL+  DNE+EVEEH SE+E+GKRKRKRKLSLY KAKE MMEEYYKLDYEDTIGDLK R
Subjt:  IEKPDFEKEDELLGLPRGWASSESGDGFLAARERSLEHKIDSDLSNVDNEEEVEEHGSEDEQGKRKRKRKLSLYTKAKEVMMEEYYKLDYEDTIGDLKAR

Query:  FKYAKIRPNRYGLSTAEIMALDDKELNQFVSMKKLAP
        FKYAKI  NRYGLSTAEIMA+DDKELNQFVS+KKLAP
Subjt:  FKYAKIRPNRYGLSTAEIMALDDKELNQFVSMKKLAP

A0A6J1FDF1 protein KRI1 homolog4.9e-5682.48Show/hide
Query:  IEKPDFEKEDELLGLPRGWASSESGDGFLAARERSLEHKIDSDLSNVDNEEEVEEHGSEDEQGKRKRKRKLSLYTKAKEVMMEEYYKLDYEDTIGDLKAR
        IEKPDF+KEDELLGLP+GWASSESGDGFLAAR+RSL HKID+D S+ +N E+ EEH  EDE+GKRKRKRKLSLY +AKE MMEEYYKLDYEDTI D+K R
Subjt:  IEKPDFEKEDELLGLPRGWASSESGDGFLAARERSLEHKIDSDLSNVDNEEEVEEHGSEDEQGKRKRKRKLSLYTKAKEVMMEEYYKLDYEDTIGDLKAR

Query:  FKYAKIRPNRYGLSTAEIMALDDKELNQFVSMKKLAP
        FKYAKI+PNRYGLSTAEI+ALDDKELNQFVS+KKLAP
Subjt:  FKYAKIRPNRYGLSTAEIMALDDKELNQFVSMKKLAP

SwissProt top hitse value%identityAlignment
Q0V8M0 Protein KRI1 homolog5.5e-1235.57Show/hide
Query:  EKPDFEKEDELLGLPRG-----WASSESGDGFLAARERSLEHKIDSDLSNVDNEEEVEEHGSEDEQGKRKRKRKLSLYT-----------KAKEVMMEEY
        EKP FE+E+   GL        WA  E G  +        +   + D ++ D  +  ++       GK+KRK   +              K  E  ++EY
Subjt:  EKPDFEKEDELLGLPRG-----WASSESGDGFLAARERSLEHKIDSDLSNVDNEEEVEEHGSEDEQGKRKRKRKLSLYT-----------KAKEVMMEEY

Query:  YKLDYEDTIGDLKARFKYAKIRPNRYGLSTAEIMALDDKELNQFVSMKK
        Y+LDYED I DL  RFKY  + P  +GLST EI+A DDKELN++ S+KK
Subjt:  YKLDYEDTIGDLKARFKYAKIRPNRYGLSTAEIMALDDKELNQFVSMKK

Q6DRJ4 Protein KRI1 homolog1.3e-0839.18Show/hide
Query:  EEVEEHGSEDEQ---GKRKRKRKLSLYTKAKEVM----------MEEYYKLDYEDTIGDLKARFKYAKIRPNRYGLSTAEIMALDDKELNQFVSMKK
        EE ++   ED      KRK+     + +K+K V           ++EYYKLD+ED I DL  RF+Y ++  N +GLST EI+   DKELN++ S++K
Subjt:  EEVEEHGSEDEQ---GKRKRKRKLSLYTKAKEVM----------MEEYYKLDYEDTIGDLKARFKYAKIRPNRYGLSTAEIMALDDKELNQFVSMKK

Q8N9T8 Protein KRI1 homolog4.6e-1135.14Show/hide
Query:  EKPDFEKEDELLGLPRGWA----SSESGDGFLAARERSLEHKIDSDLSNVDNEEEVEEHGSEDEQGKRKRKRKLSLYT-----------KAKEVMMEEYY
        EKP FE+E+   GL   W          +G  + +E   E    +  ++ D  +  ++       GK+KRK   +              K  E  ++EYY
Subjt:  EKPDFEKEDELLGLPRGWA----SSESGDGFLAARERSLEHKIDSDLSNVDNEEEVEEHGSEDEQGKRKRKRKLSLYT-----------KAKEVMMEEYY

Query:  KLDYEDTIGDLKARFKYAKIRPNRYGLSTAEIMALDDKELNQFVSMKK
        +LDYED I DL  RFKY  + P  +GLST EI+A DDKELN++ S+KK
Subjt:  KLDYEDTIGDLKARFKYAKIRPNRYGLSTAEIMALDDKELNQFVSMKK

Q8VDQ9 Protein KRI1 homolog2.4e-1237.16Show/hide
Query:  EKPDFEKEDELLGLPRGWASSESG----DGFLAARERSLEHKIDSDLSNVDNEEEVEEHGSEDEQGKRKRKRKLSLYT-----------KAKEVMMEEYY
        EKP FE+ED   GL   W     G    DG  + +E   E    +  ++ D  +  ++       GKRKRK   +              K  E  ++EYY
Subjt:  EKPDFEKEDELLGLPRGWASSESG----DGFLAARERSLEHKIDSDLSNVDNEEEVEEHGSEDEQGKRKRKRKLSLYT-----------KAKEVMMEEYY

Query:  KLDYEDTIGDLKARFKYAKIRPNRYGLSTAEIMALDDKELNQFVSMKK
        +LDYED I DL  RFKY  + P  +GLST EI++ DDKELN++ S+KK
Subjt:  KLDYEDTIGDLKARFKYAKIRPNRYGLSTAEIMALDDKELNQFVSMKK

Q9VTU0 Protein KRI1 homolog2.4e-0730.97Show/hide
Query:  EHKIDSDLSNVDNEEEVEEHGSEDEQGKRKRKRKLSLY---------------TKAKEVMMEEYYKLDYEDTIGDLKARFKYAKIRPNRYGLSTAEIMAL
        +  +D D      +E++++   E+ +G++ RK + + +                K     ++EYY++D ED IGD   RFKY +  PN +GL+  EI+  
Subjt:  EHKIDSDLSNVDNEEEVEEHGSEDEQGKRKRKRKLSLY---------------TKAKEVMMEEYYKLDYEDTIGDLKARFKYAKIRPNRYGLSTAEIMAL

Query:  DDKELNQFVSMKK
         +KELNQ+ S+KK
Subjt:  DDKELNQFVSMKK

Arabidopsis top hitse value%identityAlignment
AT3G24080.1 KRR1 family protein1.5e-4157.24Show/hide
Query:  EKPDFEKEDELLGLPRGWASSESGDGFLAARERSLEHKIDSDLSNVDNEEEVEEHGSEDE-----------QGKRKRKRKLSLYTKAKEVMMEEYYKLDY
        EKPDF+KEDELLGLP+ W  ++ GD F AARE+ L+HK   ++  +D EEE +E   EDE           +GKRKRKRK SL  K KE +MEEYYKLDY
Subjt:  EKPDFEKEDELLGLPRGWASSESGDGFLAARERSLEHKIDSDLSNVDNEEEVEEHGSEDE-----------QGKRKRKRKLSLYTKAKEVMMEEYYKLDY

Query:  EDTIGDLKARFKYAKIRPNRYGLSTAEIMALDDKELNQFVSMKKLAPCTRKN
        EDTIG+L+ RFKYAK++PNR+ L T EI+ LDD ELNQ+V +KK+AP   K+
Subjt:  EDTIGDLKARFKYAKIRPNRYGLSTAEIMALDDKELNQFVSMKKLAPCTRKN

AT3G24080.2 KRR1 family protein1.5e-4157.24Show/hide
Query:  EKPDFEKEDELLGLPRGWASSESGDGFLAARERSLEHKIDSDLSNVDNEEEVEEHGSEDE-----------QGKRKRKRKLSLYTKAKEVMMEEYYKLDY
        EKPDF+KEDELLGLP+ W  ++ GD F AARE+ L+HK   ++  +D EEE +E   EDE           +GKRKRKRK SL  K KE +MEEYYKLDY
Subjt:  EKPDFEKEDELLGLPRGWASSESGDGFLAARERSLEHKIDSDLSNVDNEEEVEEHGSEDE-----------QGKRKRKRKLSLYTKAKEVMMEEYYKLDY

Query:  EDTIGDLKARFKYAKIRPNRYGLSTAEIMALDDKELNQFVSMKKLAPCTRKN
        EDTIG+L+ RFKYAK++PNR+ L T EI+ LDD ELNQ+V +KK+AP   K+
Subjt:  EDTIGDLKARFKYAKIRPNRYGLSTAEIMALDDKELNQFVSMKKLAPCTRKN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCCTGAGTTCGGAAGTGATATGGATAATGAAGGTGATGATGATCGAGAAACCTGATTTTGAAAAAGAGGACGAGTTGCTTGGATTGCCAAGAGGGTGGGCGTCATC
TGAGTCGGGCGATGGCTTCTTAGCAGCTAGGGAAAGGAGTTTAGAACATAAAATTGATAGTGATCTGAGTAATGTGGATAATGAAGAAGAGGTTGAAGAACATGGCAGTG
AGGATGAACAAGGCAAAAGGAAGAGGAAGCGGAAACTATCGTTGTACACAAAAGCTAAAGAAGTCATGATGGAGGAATATTATAAATTAGATTACGAGGATACAATTGGA
GACTTGAAGGCGAGGTTTAAGTACGCCAAAATACGACCTAATCGTTACGGATTGAGTACTGCTGAAATCATGGCATTGGATGACAAAGAGTTGAATCAGTTTGTTTCTAT
GAAAAAGCTGGCCCCTTGCACAAGGAAGAATGGAAGATGCCAAATAGTACTAGACAGCGCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTCCTGAGTTCGGAAGTGATATGGATAATGAAGGTGATGATGATCGAGAAACCTGATTTTGAAAAAGAGGACGAGTTGCTTGGATTGCCAAGAGGGTGGGCGTCATC
TGAGTCGGGCGATGGCTTCTTAGCAGCTAGGGAAAGGAGTTTAGAACATAAAATTGATAGTGATCTGAGTAATGTGGATAATGAAGAAGAGGTTGAAGAACATGGCAGTG
AGGATGAACAAGGCAAAAGGAAGAGGAAGCGGAAACTATCGTTGTACACAAAAGCTAAAGAAGTCATGATGGAGGAATATTATAAATTAGATTACGAGGATACAATTGGA
GACTTGAAGGCGAGGTTTAAGTACGCCAAAATACGACCTAATCGTTACGGATTGAGTACTGCTGAAATCATGGCATTGGATGACAAAGAGTTGAATCAGTTTGTTTCTAT
GAAAAAGCTGGCCCCTTGCACAAGGAAGAATGGAAGATGCCAAATAGTACTAGACAGCGCCTGA
Protein sequenceShow/hide protein sequence
MLLSSEVIWIMKVMMIEKPDFEKEDELLGLPRGWASSESGDGFLAARERSLEHKIDSDLSNVDNEEEVEEHGSEDEQGKRKRKRKLSLYTKAKEVMMEEYYKLDYEDTIG
DLKARFKYAKIRPNRYGLSTAEIMALDDKELNQFVSMKKLAPCTRKNGRCQIVLDSA