; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh02G009930 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G009930
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionKri1_C domain-containing protein
Genome locationCmo_Chr02:6097853..6098119
RNA-Seq ExpressionCmoCh02G009930
SyntenyCmoCh02G009930
Gene Ontology termsGO:0000447 - endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0030686 - 90S preribosome (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646722.1 hypothetical protein Csa_005044 [Cucumis sativus]3.9e-1665.48Show/hide
Query:  MKTKELLRGKQFGKQKGIVKKRMKNSSDMHIVDNNENDKDSNGDKGNLSRKARRKQRQAEYKLSDARLQGYAKMISKPKRKTKH
        M+++ELLRGKQ G+QK I K+R KN S+MHI+D+NENDK +N DKGNLSRKARRKQRQAE KLS  R   Y K   K K+K+KH
Subjt:  MKTKELLRGKQFGKQKGIVKKRMKNSSDMHIVDNNENDKDSNGDKGNLSRKARRKQRQAEYKLSDARLQGYAKMISKPKRKTKH

KAG6592188.1 Protein KRI1-like protein, partial [Cucurbita argyrosperma subsp. sororia]1.4e-1654.21Show/hide
Query:  MKTKELLRGKQFGKQKGIVKKRMKNSSDMHIVDNNENDK-----------------------DSNGDKGNLSRKARRKQRQAEYKLSDARLQGYAKMISK
        M+TKELL+GKQFG+QK  +KK+MKN SD+H +D++EN+K                       DSN D  NLSRKARRK RQAE+KLS +RL GY K+ SK
Subjt:  MKTKELLRGKQFGKQKGIVKKRMKNSSDMHIVDNNENDK-----------------------DSNGDKGNLSRKARRKQRQAEYKLSDARLQGYAKMISK

Query:  PKRKTKH
        PK+KTKH
Subjt:  PKRKTKH

XP_022936360.1 protein KRI1 homolog [Cucurbita moschata]7.9e-1754.21Show/hide
Query:  MKTKELLRGKQFGKQKGIVKKRMKNSSDMHIVDNNENDK-----------------------DSNGDKGNLSRKARRKQRQAEYKLSDARLQGYAKMISK
        M+TKELL+GKQFG+QKG +KK+MKN SD+H ++++EN+K                       DSN D  NLSRKARRK RQAE+KLS +RL GY K+ SK
Subjt:  MKTKELLRGKQFGKQKGIVKKRMKNSSDMHIVDNNENDK-----------------------DSNGDKGNLSRKARRKQRQAEYKLSDARLQGYAKMISK

Query:  PKRKTKH
        PK+KTKH
Subjt:  PKRKTKH

XP_023535764.1 protein KRI1 homolog [Cucurbita pepo subsp. pepo]2.3e-1650Show/hide
Query:  MKTKELLRGKQFGKQKGIV--------------------------------------KKRMKNSSDMHIVDNNENDK----DSNGDKGNLSRKARRKQRQ
        M+TKELL+GKQFG+QK  +                                      KK+MKNSSD+HI+D+NENDK    DSN D+ NLSRKARRKQRQ
Subjt:  MKTKELLRGKQFGKQKGIV--------------------------------------KKRMKNSSDMHIVDNNENDK----DSNGDKGNLSRKARRKQRQ

Query:  AEYKLSDARLQGYAKMISKPKRKTKH
        AE+KLS +RL GY K+ SKPK+KTKH
Subjt:  AEYKLSDARLQGYAKMISKPKRKTKH

XP_031742740.1 protein KRI1 homolog isoform X1 [Cucumis sativus]3.9e-1665.48Show/hide
Query:  MKTKELLRGKQFGKQKGIVKKRMKNSSDMHIVDNNENDKDSNGDKGNLSRKARRKQRQAEYKLSDARLQGYAKMISKPKRKTKH
        M+++ELLRGKQ G+QK I K+R KN S+MHI+D+NENDK +N DKGNLSRKARRKQRQAE KLS  R   Y K   K K+K+KH
Subjt:  MKTKELLRGKQFGKQKGIVKKRMKNSSDMHIVDNNENDKDSNGDKGNLSRKARRKQRQAEYKLSDARLQGYAKMISKPKRKTKH

TrEMBL top hitse value%identityAlignment
A0A0A0KYR7 Kri1_C domain-containing protein3.6e-1560.71Show/hide
Query:  MKTKELLRGKQFGKQKGIVKKRMKNSSDMHIVDNNENDKDSNGDKGNLSRKARRKQRQAEYKLSDARLQGYAKMISKPKRKTKH
        M+++ELLRGKQ  +QK I K+R KN S++HI+D+NENDK +N DKGN+SRKARRKQRQAE KLS  R   Y +   K K+K+KH
Subjt:  MKTKELLRGKQFGKQKGIVKKRMKNSSDMHIVDNNENDKDSNGDKGNLSRKARRKQRQAEYKLSDARLQGYAKMISKPKRKTKH

A0A5A7V5D9 Protein KRI1-like protein2.3e-1460.71Show/hide
Query:  MKTKELLRGKQFGKQKGIVKKRMKNSSDMHIVDNNENDKDSNGDKGNLSRKARRKQRQAEYKLSDARLQGYAKMISKPKRKTKH
        M+++ELLRGKQ G+QK I K++ KN S+ +I+++NENDK +N DKGNLSRKARRKQRQAE KLS  R   Y K   K K+K+KH
Subjt:  MKTKELLRGKQFGKQKGIVKKRMKNSSDMHIVDNNENDKDSNGDKGNLSRKARRKQRQAEYKLSDARLQGYAKMISKPKRKTKH

A0A6J1DQ63 protein KRI1 homolog8.0e-1562.5Show/hide
Query:  MKTKELLRGKQFGKQKGIVKKRMKNSSDMHIVDNNENDK----DSNGDKGNLSRKARRKQRQAEYKLSDARLQGYAKMISKPKRKTKH
        M+TKELL G   G +KG +K+R KNSSD H  D+NEN+K    DS+GDKGNLSRKARRK R+AE+KLS +RL  Y K+ SK K+KTKH
Subjt:  MKTKELLRGKQFGKQKGIVKKRMKNSSDMHIVDNNENDK----DSNGDKGNLSRKARRKQRQAEYKLSDARLQGYAKMISKPKRKTKH

A0A6J1FDF1 protein KRI1 homolog3.8e-1754.21Show/hide
Query:  MKTKELLRGKQFGKQKGIVKKRMKNSSDMHIVDNNENDK-----------------------DSNGDKGNLSRKARRKQRQAEYKLSDARLQGYAKMISK
        M+TKELL+GKQFG+QKG +KK+MKN SD+H ++++EN+K                       DSN D  NLSRKARRK RQAE+KLS +RL GY K+ SK
Subjt:  MKTKELLRGKQFGKQKGIVKKRMKNSSDMHIVDNNENDK-----------------------DSNGDKGNLSRKARRKQRQAEYKLSDARLQGYAKMISK

Query:  PKRKTKH
        PK+KTKH
Subjt:  PKRKTKH

A0A6J1IED0 protein KRI1 homolog2.1e-1554.21Show/hide
Query:  MKTKELLRGKQFGKQKGIVKKRMKNSSDMHIVDNNENDK-----------------------DSNGDKGNLSRKARRKQRQAEYKLSDARLQGYAKMISK
        M+TKELL+GKQFG+QK  +KK+MK SSD+H +D+NEN+K                       DSN D  NLSRKARRK RQAE+KLS +RL GY K+  K
Subjt:  MKTKELLRGKQFGKQKGIVKKRMKNSSDMHIVDNNENDK-----------------------DSNGDKGNLSRKARRKQRQAEYKLSDARLQGYAKMISK

Query:  PKRKTKH
        PK+KTKH
Subjt:  PKRKTKH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGACCAAGGAACTACTAAGAGGCAAACAATTTGGTAAACAGAAAGGCATCGTGAAGAAGAGGATGAAGAACAGCTCCGACATGCACATTGTGGATAACAATGAGAA
TGACAAAGATTCGAATGGCGATAAGGGGAATTTATCTAGGAAAGCCAGGAGAAAACAGCGACAAGCTGAATATAAATTGTCAGATGCTCGGCTCCAGGGATACGCCAAGA
TGATCTCGAAACCTAAGAGGAAAACAAAACACTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGACCAAGGAACTACTAAGAGGCAAACAATTTGGTAAACAGAAAGGCATCGTGAAGAAGAGGATGAAGAACAGCTCCGACATGCACATTGTGGATAACAATGAGAA
TGACAAAGATTCGAATGGCGATAAGGGGAATTTATCTAGGAAAGCCAGGAGAAAACAGCGACAAGCTGAATATAAATTGTCAGATGCTCGGCTCCAGGGATACGCCAAGA
TGATCTCGAAACCTAAGAGGAAAACAAAACACTAA
Protein sequenceShow/hide protein sequence
MKTKELLRGKQFGKQKGIVKKRMKNSSDMHIVDNNENDKDSNGDKGNLSRKARRKQRQAEYKLSDARLQGYAKMISKPKRKTKH