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CmoCh02G009960 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G009960
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr02:6101401..6102999
RNA-Seq ExpressionCmoCh02G009960
SyntenyCmoCh02G009960
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAG1842923.1 unnamed protein product, partial [Musa acuminata subsp. malaccensis]1.2e-1149.41Show/hide
Query:  PATYLKNHHETTAAAMPNPPDIKNPMIKSETVIAAGTRTGLNMTNSGVAMARAMTVPVIVRPERARREPPVVAAVMALTTLWERG
        P  YL  H  T  AA P PP+++ P+   +T IAAGT TGL MT+SGVA  R MTV   V P+R   +PP +AAV A TT+ + G
Subjt:  PATYLKNHHETTAAAMPNPPDIKNPMIKSETVIAAGTRTGLNMTNSGVAMARAMTVPVIVRPERARREPPVVAAVMALTTLWERG

CBI25770.3 unnamed protein product, partial [Vitis vinifera]8.8e-1542.76Show/hide
Query:  LTLIVTTTPFSSQPSKHTLFKHYLPNHYFQPSTCIPLPP--NLYDFFPGKSLLASC------------LLPATYLKNHHETTAAAMPNPPDIKNPMIKSE
        L  I+T T   S PS  T+    L     Q   C+PL P  +    F   +L  S               P TYL +H  T  A  PNPPD  +P+    
Subjt:  LTLIVTTTPFSSQPSKHTLFKHYLPNHYFQPSTCIPLPP--NLYDFFPGKSLLASC------------LLPATYLKNHHETTAAAMPNPPDIKNPMIKSE

Query:  TVIAAGTRTGLNMTNSGVAMARAMTVPVIVRPERARREPPVVAAV
        TV+AAGT TGLN+T+SGVA  RA+TVP  VRPER  +EPP+VAAV
Subjt:  TVIAAGTRTGLNMTNSGVAMARAMTVPVIVRPERARREPPVVAAV

KAG1366260.1 hypothetical protein COCNU_13G000500 [Cocos nucifera]1.5e-1152.27Show/hide
Query:  PATYLKNHHETTAAAMPNPPDIKNPMIKSETVIAAGTRTGLNMTNSGVAMARAMTVPVIVRPERARREPPVVAAVMALTTLWERGNSF
        P T L  H   T+A +PN PD  NP+  S   IAAGT TGL  TNSGVAMA  MTVPV   PE+ARR PP+   V   T  WE    F
Subjt:  PATYLKNHHETTAAAMPNPPDIKNPMIKSETVIAAGTRTGLNMTNSGVAMARAMTVPVIVRPERARREPPVVAAVMALTTLWERGNSF

KDP22470.1 hypothetical protein JCGZ_26301 [Jatropha curcas]4.6e-1665.28Show/hide
Query:  AAMPNPPDIKNPMIKSETVIAAGTRTGLNMTNSGVAMARAMTVPVIVRPERARREPPVVAAVMALTTLWERG
        AA P PP+ KNP+I  +TVI AGTRTGLNMT++GVA   AMTVP  V+PER RR+PP V AV A TT W+RG
Subjt:  AAMPNPPDIKNPMIKSETVIAAGTRTGLNMTNSGVAMARAMTVPVIVRPERARREPPVVAAVMALTTLWERG

RDX92809.1 hypothetical protein CR513_25006, partial [Mucuna pruriens]1.9e-0951.28Show/hide
Query:  AAMPNPPDIKNPMIKSETVIAAGTRTGLNMTNSGVAMARAMTVPVIVRPERARREPPVVAAVMALTTLWERGNSFEVK
        AA PNPP+ KNP + S T   AGTRTGLN+TNSGV M R MTV   ++     REPP + AV  LT+   R +S  V+
Subjt:  AAMPNPPDIKNPMIKSETVIAAGTRTGLNMTNSGVAMARAMTVPVIVRPERARREPPVVAAVMALTTLWERGNSFEVK

TrEMBL top hitse value%identityAlignment
A0A067JR34 Uncharacterized protein2.2e-1665.28Show/hide
Query:  AAMPNPPDIKNPMIKSETVIAAGTRTGLNMTNSGVAMARAMTVPVIVRPERARREPPVVAAVMALTTLWERG
        AA P PP+ KNP+I  +TVI AGTRTGLNMT++GVA   AMTVP  V+PER RR+PP V AV A TT W+RG
Subjt:  AAMPNPPDIKNPMIKSETVIAAGTRTGLNMTNSGVAMARAMTVPVIVRPERARREPPVVAAVMALTTLWERG

A0A151TSW3 Uncharacterized protein1.5e-0750Show/hide
Query:  AAMPNPPDIKNPMIKSETVIAAGTRTGLNMTNSGVAMARAMTVPVIVRPERARREPPVVAAVMALTTLWERG
        AA P PP+ K P     +  AAGTR GL +T  GVAM   MTVPV   P++++ E P+VAAVM L T+W  G
Subjt:  AAMPNPPDIKNPMIKSETVIAAGTRTGLNMTNSGVAMARAMTVPVIVRPERARREPPVVAAVMALTTLWERG

A0A251RF23 Uncharacterized protein1.2e-0648Show/hide
Query:  YLKNHHETTAAAMPNPPDIKNPMIKSETVIAAGTRTGLNMTNSGVAMARAMTVPVIVRPERARREPPVVAAVMAL
        YL  +     AA P+PP+   P     T I AGTR GLN T++GVAM RA+TVPV V P+R +R  P   AV  L
Subjt:  YLKNHHETTAAAMPNPPDIKNPMIKSETVIAAGTRTGLNMTNSGVAMARAMTVPVIVRPERARREPPVVAAVMAL

A0A371GQH9 Uncharacterized protein (Fragment)9.2e-1051.28Show/hide
Query:  AAMPNPPDIKNPMIKSETVIAAGTRTGLNMTNSGVAMARAMTVPVIVRPERARREPPVVAAVMALTTLWERGNSFEVK
        AA PNPP+ KNP + S T   AGTRTGLN+TNSGV M R MTV   ++     REPP + AV  LT+   R +S  V+
Subjt:  AAMPNPPDIKNPMIKSETVIAAGTRTGLNMTNSGVAMARAMTVPVIVRPERARREPPVVAAVMALTTLWERGNSFEVK

M0U6S1 Uncharacterized protein3.5e-0948.75Show/hide
Query:  PATYLKNHHETTAAAMPNPPDIKNPMIKSETVIAAGTRTGLNMTNSGVAMARAMTVPVIVRPERARREPPVVAAVMALTT
        P   L  HH T +AA P+PPD + P   S T IAAGT TGL + +SGVA A AMTV   V P+    + P  AA+ A TT
Subjt:  PATYLKNHHETTAAAMPNPPDIKNPMIKSETVIAAGTRTGLNMTNSGVAMARAMTVPVIVRPERARREPPVVAAVMALTT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G07572.1 unknown protein2.0e-0435.87Show/hide
Query:  PPDIKNPMIKSET--VIAAGTRTGLNMTNSGVAMARAMTVPVIVRPERARREPPVVAAVMALTTLWERGNSFEVKKSDYIESGVVRGGKLLL
        PP IK   +K+ T  VI AGTRTGLN   SG+  A AM VP   +P   +R    V A  A+ T    G         ++ + +  G K+ L
Subjt:  PPDIKNPMIKSET--VIAAGTRTGLNMTNSGVAMARAMTVPVIVRPERARREPPVVAAVMALTTLWERGNSFEVKKSDYIESGVVRGGKLLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGTATTTCACGTTTTTCTCAATTTTGATTCGTTTGGTTTGTCTACACATGGTGGCTTTGATGATTTCATGAAAGATCAAGCTCAACAGACCGGAATGCAGGTTTA
TTTTATTCATCGAACATTTAGGCCAACCTCAAATTACATTATCCAACTGCCACTGACTTTAATCGTTACCACCACCCCCTTCTCTTCTCAACCATCAAAACACACTTTGT
TCAAACATTACCTACCAAATCATTACTTTCAACCTTCAACTTGTATCCCCTTACCGCCAAACTTATACGATTTTTTTCCGGGCAAATCATTGTTAGCATCTTGCCTTCTC
CCAGCCACGTACCTGAAAAACCACCACGAAACAACCGCCGCAGCGATGCCGAATCCACCAGATATCAAGAACCCCATGATCAAAAGTGAGACAGTGATCGCCGCCGGGAC
GAGAACTGGACTGAATATGACAAACAGCGGTGTGGCGATGGCTAGAGCAATGACTGTACCAGTCATTGTGAGGCCGGAGAGGGCGAGGAGGGAGCCGCCAGTTGTGGCTG
CGGTAATGGCCTTGACGACTTTGTGGGAGCGGGGTAATTCATTCGAGGTGAAGAAGAGTGATTATATAGAGAGTGGAGTGGTACGTGGTGGAAAGCTTCTCTTGCATGAA
TTTTAA
mRNA sequenceShow/hide mRNA sequence
CTTCCCTTGATACTCGTCTTCTTTAACTCGGCGGTGATAGCAGCTATACCCTAGCCAATCGTGCTTCGTCTTCGGAGGTTCTTCAGTTTTATCGCTTCTTAATTACTTCA
ACAAAATCTGGATTATCCGCCGCTGTTTTTGAGAGATCGAGTTCTTTTCGTTTAGGGTAGAAGATAGCTTTTGATTCATATGTTCTCCCGTATGTTTTGATGCTTGATAG
ATCGTTTTCGGTTTGTGAGTTTTTTTGAGATCCAGAGATGGATGTATTTCACGTTTTTCTCAATTTTGATTCGTTTGGTTTGTCTACACATGGTGGCTTTGATGATTTCA
TGAAAGATCAAGCTCAACAGACCGGAATGCAGGTTTATTTTATTCATCGAACATTTAGGCCAACCTCAAATTACATTATCCAACTGCCACTGACTTTAATCGTTACCACC
ACCCCCTTCTCTTCTCAACCATCAAAACACACTTTGTTCAAACATTACCTACCAAATCATTACTTTCAACCTTCAACTTGTATCCCCTTACCGCCAAACTTATACGATTT
TTTTCCGGGCAAATCATTGTTAGCATCTTGCCTTCTCCCAGCCACGTACCTGAAAAACCACCACGAAACAACCGCCGCAGCGATGCCGAATCCACCAGATATCAAGAACC
CCATGATCAAAAGTGAGACAGTGATCGCCGCCGGGACGAGAACTGGACTGAATATGACAAACAGCGGTGTGGCGATGGCTAGAGCAATGACTGTACCAGTCATTGTGAGG
CCGGAGAGGGCGAGGAGGGAGCCGCCAGTTGTGGCTGCGGTAATGGCCTTGACGACTTTGTGGGAGCGGGGTAATTCATTCGAGGTGAAGAAGAGTGATTATATAGAGAG
TGGAGTGGTACGTGGTGGAAAGCTTCTCTTGCATGAATTTTAA
Protein sequenceShow/hide protein sequence
MDVFHVFLNFDSFGLSTHGGFDDFMKDQAQQTGMQVYFIHRTFRPTSNYIIQLPLTLIVTTTPFSSQPSKHTLFKHYLPNHYFQPSTCIPLPPNLYDFFPGKSLLASCLL
PATYLKNHHETTAAAMPNPPDIKNPMIKSETVIAAGTRTGLNMTNSGVAMARAMTVPVIVRPERARREPPVVAAVMALTTLWERGNSFEVKKSDYIESGVVRGGKLLLHE
F