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CmoCh02G009990 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G009990
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionorigin of replication complex subunit 3
Genome locationCmo_Chr02:6115771..6118178
RNA-Seq ExpressionCmoCh02G009990
SyntenyCmoCh02G009990
Gene Ontology termsGO:0006270 - DNA replication initiation (biological process)
GO:0005656 - nuclear pre-replicative complex (cellular component)
GO:0005664 - nuclear origin of replication recognition complex (cellular component)
GO:0031261 - DNA replication preinitiation complex (cellular component)
GO:0003688 - DNA replication origin binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR040855 - ORC3, winged helix C-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7035560.1 Origin of replication complex subunit 3, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-0778.95Show/hide
Query:  MYNLAQEHGDLINLHDWFQSFKTVVSHPDYRVASDAKQ
        MYNLAQEHGDLINLHDWFQSFKTVVSHP  +     KQ
Subjt:  MYNLAQEHGDLINLHDWFQSFKTVVSHPDYRVASDAKQ
XP_022957914.1 origin of replication complex subunit 3 isoform X1 [Cucurbita moschata]2.2e-0778.95Show/hide
Query:  MYNLAQEHGDLINLHDWFQSFKTVVSHPDYRVASDAKQ
        MYNLAQEHGDLINLHDWFQSFKTVVSHP  +     KQ
Subjt:  MYNLAQEHGDLINLHDWFQSFKTVVSHPDYRVASDAKQ
XP_022957916.1 origin of replication complex subunit 3 isoform X2 [Cucurbita moschata]2.2e-0778.95Show/hide
Query:  MYNLAQEHGDLINLHDWFQSFKTVVSHPDYRVASDAKQ
        MYNLAQEHGDLINLHDWFQSFKTVVSHP  +     KQ
Subjt:  MYNLAQEHGDLINLHDWFQSFKTVVSHPDYRVASDAKQ
XP_022957918.1 origin of replication complex subunit 3 isoform X3 [Cucurbita moschata]2.2e-0778.95Show/hide
Query:  MYNLAQEHGDLINLHDWFQSFKTVVSHPDYRVASDAKQ
        MYNLAQEHGDLINLHDWFQSFKTVVSHP  +     KQ
Subjt:  MYNLAQEHGDLINLHDWFQSFKTVVSHPDYRVASDAKQ
XP_023534344.1 origin of replication complex subunit 3 isoform X2 [Cucurbita pepo subsp. pepo]2.9e-07100Show/hide
Query:  MYNLAQEHGDLINLHDWFQSFKTVVSHP
        MYNLAQEHGDLINLHDWFQSFKTVVSHP
Subjt:  MYNLAQEHGDLINLHDWFQSFKTVVSHP
TrEMBL top hitse value%identityAlignment
A0A6J1H0J7 origin of replication complex subunit 3 isoform X21.1e-0778.95Show/hide
Query:  MYNLAQEHGDLINLHDWFQSFKTVVSHPDYRVASDAKQ
        MYNLAQEHGDLINLHDWFQSFKTVVSHP  +     KQ
Subjt:  MYNLAQEHGDLINLHDWFQSFKTVVSHPDYRVASDAKQ
A0A6J1H1M8 origin of replication complex subunit 3 isoform X31.1e-0778.95Show/hide
Query:  MYNLAQEHGDLINLHDWFQSFKTVVSHPDYRVASDAKQ
        MYNLAQEHGDLINLHDWFQSFKTVVSHP  +     KQ
Subjt:  MYNLAQEHGDLINLHDWFQSFKTVVSHPDYRVASDAKQ
A0A6J1H3F7 origin of replication complex subunit 3 isoform X11.1e-0778.95Show/hide
Query:  MYNLAQEHGDLINLHDWFQSFKTVVSHPDYRVASDAKQ
        MYNLAQEHGDLINLHDWFQSFKTVVSHP  +     KQ
Subjt:  MYNLAQEHGDLINLHDWFQSFKTVVSHPDYRVASDAKQ
A0A6J1K0R6 origin of replication complex subunit 3 isoform X21.4e-07100Show/hide
Query:  MYNLAQEHGDLINLHDWFQSFKTVVSHP
        MYNLAQEHGDLINLHDWFQSFKTVVSHP
Subjt:  MYNLAQEHGDLINLHDWFQSFKTVVSHP
A0A6J1K3I8 origin of replication complex subunit 3 isoform X11.4e-07100Show/hide
Query:  MYNLAQEHGDLINLHDWFQSFKTVVSHP
        MYNLAQEHGDLINLHDWFQSFKTVVSHP
Subjt:  MYNLAQEHGDLINLHDWFQSFKTVVSHP
SwissProt top hitse value%identityAlignment
Q6E7H0 Origin of replication complex subunit 39.6e-0649.06Show/hide
Query:  GSSGVPENHK---MYNLAQEHGDLINLHDWFQSFKTVVSHPDYRVASDAKQKT
        G++ +P  H    +Y LAQEH D+INLHDW+QSFKT++       +S AKQK+
Subjt:  GSSGVPENHK---MYNLAQEHGDLINLHDWFQSFKTVVSHPDYRVASDAKQKT
Arabidopsis top hitse value%identityAlignment
AT5G16690.1 origin recognition complex subunit 36.8e-0749.06Show/hide
Query:  GSSGVPENHK---MYNLAQEHGDLINLHDWFQSFKTVVSHPDYRVASDAKQKT
        G++ +P  H    +Y LAQEH D+INLHDW+QSFKT++       +S AKQK+
Subjt:  GSSGVPENHK---MYNLAQEHGDLINLHDWFQSFKTVVSHPDYRVASDAKQKT

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGGCTCTGCGATGTTGAAGTGAACCTAGGCCTTGATTGGAGATCCAAGAAGAAGGATTCAAGTGGATCTTCTGGAGTTCCAGAAAATCATAAAATGTATAACCTAGCACA
AGAGCATGGTGATCTCATCAATCTCCATGATTGGTTCCAATCGTTCAAGACAGTTGTTAGTCATCCTGATTACAGGGTTGCTTCGGATGCCAAGCAAAAGACGGCC
mRNA sequenceShow/hide mRNA sequence
CGGCTCTGCGATGTTGAAGTGAACCTAGGCCTTGATTGGAGATCCAAGAAGAAGGATTCAAGTGGATCTTCTGGAGTTCCAGAAAATCATAAAATGTATAACCTAGCACA
AGAGCATGGTGATCTCATCAATCTCCATGATTGGTTCCAATCGTTCAAGACAGTTGTTAGTCATCCTGATTACAGGGTTGCTTCGGATGCCAAGCAAAAGACGGCC
Protein sequenceShow/hide protein sequence
RLCDVEVNLGLDWRSKKKDSSGSSGVPENHKMYNLAQEHGDLINLHDWFQSFKTVVSHPDYRVASDAKQKTA