CuGenDBv2

Gene ID	CmoCh02G010040
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	60S ribosomal protein L13
Genome location	Cmo_Chr02:6139466..6141428
RNA-Seq Expression	CmoCh02G010040
Synteny	CmoCh02G010040
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0022625 - cytosolic large ribosomal subunit (cellular component) GO:0003723 - RNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR001380 - Ribosomal protein L13e IPR018256 - Ribosomal protein L13e, conserved site

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6605653.1 hypothetical protein SDJN03_02970, partial [Cucurbita argyrosperma subsp. sororia]

1.8e-107

99.51

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Query:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
        MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
Subjt:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR

Query:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA
        RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKAPVELV VTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA
Subjt:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

XP_022929155.1 60S ribosomal protein L13-3-like [Cucurbita moschata]

1.5e-104

96.12

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Query:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
        MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVK FPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
Subjt:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR

Query:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA
        RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQG YMSIGLEK  VELVK+TE++KSFKAYDKLR+ERTNARHVGARLKRAAEA
Subjt:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

XP_022958723.1 60S ribosomal protein L13-3-like [Cucurbita moschata]

3.7e-108

100

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Query:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
        MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
Subjt:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR

Query:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA
        RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA
Subjt:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

XP_022995473.1 60S ribosomal protein L13-3-like [Cucurbita maxima]

1.4e-107

99.51

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Query:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
        MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
Subjt:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR

Query:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA
        RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYM IGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA
Subjt:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

XP_023550831.1 60S ribosomal protein L13-3-like [Cucurbita pepo subsp. pepo]

2.5e-104

95.63

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Query:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
        MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVK FPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
Subjt:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR

Query:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA
        RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQG YMSIGLEK  VELVK+TE++KSFKAYDK+R+ERTNARHVGARLKRAAEA
Subjt:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CTG8 60S ribosomal protein L13

1.6e-104

96.6

Show/hide

Query:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
        MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVK FPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
Subjt:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR

Query:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA
        RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYM IGLEK  VELVKVTE+MKSFKAYDKLRVER NARHVGARLK+AAEA
Subjt:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

A0A6J1ETG8 60S ribosomal protein L13

7.0e-105

96.12

Show/hide

Query:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
        MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVK FPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
Subjt:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR

Query:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA
        RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQG YMSIGLEK  VELVK+TE++KSFKAYDKLR+ERTNARHVGARLKRAAEA
Subjt:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

A0A6J1H3W1 60S ribosomal protein L13

1.8e-108

100

Show/hide

Query:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
        MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
Subjt:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR

Query:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA
        RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA
Subjt:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

A0A6J1I0U7 60S ribosomal protein L13

2.0e-104

95.63

Show/hide

Query:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
        MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRN RQEKAVK FPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
Subjt:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR

Query:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA
        RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQG YMSIGLEK  VELVK+TE++KSFKAYDKLR+ERTNARHVGARLKRAAEA
Subjt:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

A0A6J1K811 60S ribosomal protein L13

6.8e-108

99.51

Show/hide

Query:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
        MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
Subjt:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR

Query:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA
        RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYM IGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA
Subjt:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

SwissProt top hits

e value

%identity

Alignment

P41127 60S ribosomal protein L13-1

4.5e-93

82.52

Show/hide

Query:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
        MKHNNVIP+GHF+KHWQNYV+TWFNQPARKTRRR ARQ+KAVK FPRPT+GPLRP+VHGQTLKYNMKVR G+GF+LEELKAAGIPKK APTIGIAVDHRR
Subjt:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR

Query:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA
        +NRSLE LQ NVQRLKTYK K+V+FPRRARK KAGDSTPEELA ATQVQG Y+ I  EK  +ELVK+T EMKSFKA+DK+R+ERTN RH GAR KRAAEA
Subjt:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

P41128 60S ribosomal protein L13-1

1.5e-91

82.04

Show/hide

Query:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
        MKHNNVIP+GHF+KHWQNYV+TWFNQPARKTRRR ARQ+KAVK FPRPTAGPLRP+VHGQTLKYNMKVR G+GF+LEELK+AGIPKK APTIGIAVDHRR
Subjt:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR

Query:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA
        +NRSLE LQ+NVQRLKTYKAK+V+FPRRARK KAGDST EELA ATQVQG YM I  EK   ELVK+T EMKS KA+DK+R+ERTN RH GAR KRAA+A
Subjt:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

P41129 60S ribosomal protein L13-2

1.9e-91

81.55

Show/hide

Query:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
        MKHNNVIP+GHF+KHWQNYV+TWFNQPARKTRRR ARQ+KAVK FPRPTAGPLRP+VHGQTLKYNMKVR G+GF+LEELKAAGIPKK APTIGI++DHRR
Subjt:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR

Query:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA
        +NRSLE LQ+NVQRLKTYKAK+V+FPRRARK KAGDST EELA ATQVQG YM I  EK  +ELVK+T EMKS  AYDK+R+ERTN RH GAR KRAA+A
Subjt:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

Q9FF90 60S ribosomal protein L13-3

5.9e-93

82.52

Show/hide

Query:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
        MKHNNVIPS HFRKHWQNYV+TWFNQPARKTRRR ARQ+KAVK FPRPT+GPLRP+VHGQTLKYNMKVRAG+GF+LEELK AGIPKK APTIGI+VDHRR
Subjt:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR

Query:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA
        +NRSLE LQ+NVQRLKTYKAK+VVFPRR+R+ KAGDSTPEELA ATQVQG YM I   KA +ELVK+T ++K+FKAYDK+R+ERTNARH GAR KRAAEA
Subjt:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

Q9SMT4 Putative 60S ribosomal protein L13-2

1.9e-78

72.82

Show/hide

Query:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
        MKHNNVIP+GHF+K W+NYV+T FNQPA KTRRR ARQ KAVK FPRPTAGP+RP+VH QTL YNMKVRAG+GF+LEELKAAGIPKK APTIGI+VDH R
Subjt:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR

Query:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA
        +NRSLE  Q NVQRLKTYKAK+V+FPR AR  K GDS  +ELA ATQVQ  +M I  E   +ELVK+T +MK F AYDK+R+E  N RH G R KRAAEA
Subjt:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

Arabidopsis top hits

e value

%identity

Alignment

AT3G49010.1 breast basic conserved 1

3.2e-94

82.52

Show/hide

Query:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
        MKHNNVIP+GHF+KHWQNYV+TWFNQPARKTRRR ARQ+KAVK FPRPT+GPLRP+VHGQTLKYNMKVR G+GF+LEELKAAGIPKK APTIGIAVDHRR
Subjt:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR

Query:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA
        +NRSLE LQ NVQRLKTYK K+V+FPRRARK KAGDSTPEELA ATQVQG Y+ I  EK  +ELVK+T EMKSFKA+DK+R+ERTN RH GAR KRAAEA
Subjt:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

AT3G49010.2 breast basic conserved 1

3.2e-94

82.52

Show/hide

Query:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
        MKHNNVIP+GHF+KHWQNYV+TWFNQPARKTRRR ARQ+KAVK FPRPT+GPLRP+VHGQTLKYNMKVR G+GF+LEELKAAGIPKK APTIGIAVDHRR
Subjt:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR

Query:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA
        +NRSLE LQ NVQRLKTYK K+V+FPRRARK KAGDSTPEELA ATQVQG Y+ I  EK  +ELVK+T EMKSFKA+DK+R+ERTN RH GAR KRAAEA
Subjt:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

AT3G49010.3 breast basic conserved 1

3.2e-94

82.52

Show/hide

Query:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
        MKHNNVIP+GHF+KHWQNYV+TWFNQPARKTRRR ARQ+KAVK FPRPT+GPLRP+VHGQTLKYNMKVR G+GF+LEELKAAGIPKK APTIGIAVDHRR
Subjt:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR

Query:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA
        +NRSLE LQ NVQRLKTYK K+V+FPRRARK KAGDSTPEELA ATQVQG Y+ I  EK  +ELVK+T EMKSFKA+DK+R+ERTN RH GAR KRAAEA
Subjt:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

AT3G49010.4 breast basic conserved 1

3.0e-92

82.04

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Query:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
        MKHNNVIP+GHF+KHWQNYV+TWFNQPARKTRRR ARQ+KAVK FPRPT+GPLRP+VHGQTLKYNMKVR G+GF+LEELKAAGIPKK APTIGIAVDHRR
Subjt:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR

Query:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA
        +NRSLE LQ NVQRLKTYK K+V+FPRRAR  KAGDSTPEELA ATQVQG Y+ I  EK  +ELVK+T EMKSFKA+DK+R+ERTN RH GAR KRAAEA
Subjt:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

AT5G23900.1 Ribosomal protein L13e family protein

4.2e-94

82.52

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Query:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
        MKHNNVIPS HFRKHWQNYV+TWFNQPARKTRRR ARQ+KAVK FPRPT+GPLRP+VHGQTLKYNMKVRAG+GF+LEELK AGIPKK APTIGI+VDHRR
Subjt:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR

Query:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA
        +NRSLE LQ+NVQRLKTYKAK+VVFPRR+R+ KAGDSTPEELA ATQVQG YM I   KA +ELVK+T ++K+FKAYDK+R+ERTNARH GAR KRAAEA
Subjt:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

Sequences

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CDS sequence

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ATGAAGCACAACAATGTTATCCCTAGTGGGCACTTTAGGAAGCATTGGCAAAATTATGTTAGAACTTGGTTCAACCAACCTGCTCGGAAAACAAGGAGAAGGAATGCTCG
TCAGGAAAAGGCTGTGAAAACTTTCCCTCGGCCTACTGCTGGACCACTTCGACCTATTGTTCATGGACAGACATTGAAGTATAACATGAAAGTCAGGGCTGGCAGAGGCT
TCTCTTTGGAAGAATTGAAGGCAGCTGGCATTCCAAAGAAATACGCACCAACAATTGGCATTGCAGTCGACCATCGTCGCAGAAACCGCTCCTTGGAGAGTCTTCAAGCC
AATGTGCAGAGGCTGAAGACTTACAAGGCCAAGGTGGTCGTTTTCCCACGACGTGCTCGCAAGTTCAAGGCTGGTGATTCTACTCCTGAGGAACTAGCAACTGCCACTCA
GGTCCAGGGCTCTTACATGTCTATTGGACTAGAGAAGGCACCAGTTGAGCTTGTGAAGGTAACAGAAGAAATGAAATCTTTTAAGGCCTATGACAAGCTTCGTGTTGAGC
GAACGAATGCTCGCCATGTTGGTGCTCGGTTGAAGAGGGCCGCCGAGGCAGAGAAGGAAGAGAAGAAGTAA

mRNA sequence

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GGAGAGTCCCTAGGGTTTTGTCAATGGCCGTATATATGAAATTTTAGTGGCCATTGAACGCAGAAGGAACGGAGTGACTGGAATTGCCGAAGCGGGCGCAGAGAAAGAAT
AAGGTAAGCCATGAAGCACAACAATGTTATCCCTAGTGGGCACTTTAGGAAGCATTGGCAAAATTATGTTAGAACTTGGTTCAACCAACCTGCTCGGAAAACAAGGAGAA
GGAATGCTCGTCAGGAAAAGGCTGTGAAAACTTTCCCTCGGCCTACTGCTGGACCACTTCGACCTATTGTTCATGGACAGACATTGAAGTATAACATGAAAGTCAGGGCT
GGCAGAGGCTTCTCTTTGGAAGAATTGAAGGCAGCTGGCATTCCAAAGAAATACGCACCAACAATTGGCATTGCAGTCGACCATCGTCGCAGAAACCGCTCCTTGGAGAG
TCTTCAAGCCAATGTGCAGAGGCTGAAGACTTACAAGGCCAAGGTGGTCGTTTTCCCACGACGTGCTCGCAAGTTCAAGGCTGGTGATTCTACTCCTGAGGAACTAGCAA
CTGCCACTCAGGTCCAGGGCTCTTACATGTCTATTGGACTAGAGAAGGCACCAGTTGAGCTTGTGAAGGTAACAGAAGAAATGAAATCTTTTAAGGCCTATGACAAGCTT
CGTGTTGAGCGAACGAATGCTCGCCATGTTGGTGCTCGGTTGAAGAGGGCCGCCGAGGCAGAGAAGGAAGAGAAGAAGTAAATGGTTCAAAGGTTTTAACTGTGCGCCCA
TATGTTTTGAAACGAAAATTCAAGTTTGCTAGTGTACGGCGTTGAAATTTGGTACCTTTTTCCCTAATTTATATGTTCAAACCTGAATTATGAGTTCAATTTTGAAATGA
TTAGAGATTTTTTCTATGATGCATATGAACGAACATGCGCAGATTTCACAGGTGTTATACGATACCTAGATAGTTATCTGTGGCTTATACTATTGAAATATACTATTAGT
CCC

Protein sequence

Show/hide protein sequence

MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQA
NVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEAEKEEKK

CmoCh02G010040 (gene) of Cucurbita moschata (Rifu) v1 genome