; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh02G010460 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G010460
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionprotein BOLA4, chloroplastic/mitochondrial
Genome locationCmo_Chr02:6366399..6371939
RNA-Seq ExpressionCmoCh02G010460
SyntenyCmoCh02G010460
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
GO:0009507 - chloroplast (cellular component)
InterPro domainsIPR002634 - BolA protein
IPR036065 - BolA-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605693.1 Protein BOLA4, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]8.4e-8598.87Show/hide
Query:  MIKVPQVAFRRVLPLFVHRNEQFSIVSQQFTTNCVRTAAVSAAITTTTATCVRSKSSNVLKFSYVNGRSSNWGSSRNMCVRATQVNDSGSIDSPLMQSME
        MIKVPQVAFRRVLPLFVHRNEQFSIVSQQFTTNCVRTAAVSAAITTTTATCVRSKSSNVLKFSYVNGRSSNWGSSRNMCVRATQVNDSGSIDSPLMQSME
Subjt:  MIKVPQVAFRRVLPLFVHRNEQFSIVSQQFTTNCVRTAAVSAAITTTTATCVRSKSSNVLKFSYVNGRSSNWGSSRNMCVRATQVNDSGSIDSPLMQSME

Query:  NKVIKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQIS
        NK IKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQ S
Subjt:  NKVIKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQIS

KAG7035601.1 Protein BOLA4, chloroplastic/mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-7995.48Show/hide
Query:  MIKVPQVAFRRVLPLFVHRNEQFSIVSQQFTTNCVRTAAVSAAITTTTATCVRSKSSNVLKFSYVNGRSSNWGSSRNMCVRATQVNDSGSIDSPLMQSME
        MIKVPQVAFRRVLPLFVHRNEQF IVSQQFTT+CVRTAAVSAAITTTTAT V SKSSNVLKFSYVN R SNWGSSRNMCVRATQVNDSGSIDSPLMQSME
Subjt:  MIKVPQVAFRRVLPLFVHRNEQFSIVSQQFTTNCVRTAAVSAAITTTTATCVRSKSSNVLKFSYVNGRSSNWGSSRNMCVRATQVNDSGSIDSPLMQSME

Query:  NKVIKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQIS
        NK IKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQ S
Subjt:  NKVIKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQIS

XP_022958680.1 protein BOLA4, chloroplastic/mitochondrial [Cucurbita moschata]1.3e-8599.44Show/hide
Query:  MIKVPQVAFRRVLPLFVHRNEQFSIVSQQFTTNCVRTAAVSAAITTTTATCVRSKSSNVLKFSYVNGRSSNWGSSRNMCVRATQVNDSGSIDSPLMQSME
        MIKVPQVAFRRVLPLFVHRNEQFSIVSQQFTTNCVRTAAVSAAITTTTATCVRSKSSNVLKFSYVNGRSSNWGSSRNMCVRATQVNDSGSIDSPLMQSME
Subjt:  MIKVPQVAFRRVLPLFVHRNEQFSIVSQQFTTNCVRTAAVSAAITTTTATCVRSKSSNVLKFSYVNGRSSNWGSSRNMCVRATQVNDSGSIDSPLMQSME

Query:  NKVIKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQIS
        NK IKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQIS
Subjt:  NKVIKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQIS

XP_022996142.1 protein BOLA4, chloroplastic/mitochondrial [Cucurbita maxima]1.3e-8096.05Show/hide
Query:  MIKVPQVAFRRVLPLFVHRNEQFSIVSQQFTTNCVRTAAVSAAITTTTATCVRSKSSNVLKFSYVNGRSSNWGSSRNMCVRATQVNDSGSIDSPLMQSME
        MIKVPQVAFRRVLPLFVHRNEQF IVSQQFTTNCVRTAAVSAAITTTTAT V SKSSNVLKFSYVNGR SNWGSSRNMCVRATQVNDSGSIDSPLMQSME
Subjt:  MIKVPQVAFRRVLPLFVHRNEQFSIVSQQFTTNCVRTAAVSAAITTTTATCVRSKSSNVLKFSYVNGRSSNWGSSRNMCVRATQVNDSGSIDSPLMQSME

Query:  NKVIKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQIS
        NK IKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTP EAEAQ S
Subjt:  NKVIKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQIS

XP_023534696.1 protein BOLA4, chloroplastic/mitochondrial [Cucurbita pepo subsp. pepo]6.2e-8094.92Show/hide
Query:  MIKVPQVAFRRVLPLFVHRNEQFSIVSQQFTTNCVRTAAVSAAITTTTATCVRSKSSNVLKFSYVNGRSSNWGSSRNMCVRATQVNDSGSIDSPLMQSME
        MIK PQVAFRRVLPL VHRNEQF +VSQQFTTNCVRTAAVSAAITTTTAT V SKSSNVLKFSYVNGR SNWGSSRNMCVRATQVNDSGSIDSPLMQSME
Subjt:  MIKVPQVAFRRVLPLFVHRNEQFSIVSQQFTTNCVRTAAVSAAITTTTATCVRSKSSNVLKFSYVNGRSSNWGSSRNMCVRATQVNDSGSIDSPLMQSME

Query:  NKVIKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQIS
        NK IKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQ S
Subjt:  NKVIKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQIS

TrEMBL top hitse value%identityAlignment
A0A0A0KRR5 Uncharacterized protein1.6e-6580.23Show/hide
Query:  MIKVPQVAFRRVLPLFVHRNEQFSIVSQQFTTNCVRTAAVSAAITTTTATCVRSKSSNVLKFSYVNGRSSNWGSSRNMCVRATQVNDSGSIDSPLMQSME
        MIKVPQVAFRRVLP+F+ RN  FS+VS+Q T+NCV T AV A I +T+ T +RSKSSNV K+S  NG    WGSSRN+ +RATQVN+SGSIDSPLMQSME
Subjt:  MIKVPQVAFRRVLPLFVHRNEQFSIVSQQFTTNCVRTAAVSAAITTTTATCVRSKSSNVLKFSYVNGRSSNWGSSRNMCVRATQVNDSGSIDSPLMQSME

Query:  NKVIKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQIS
        NK IKEQL+AQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEA AQ S
Subjt:  NKVIKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQIS

A0A1S3CT29 protein BOLA4, chloroplastic/mitochondrial2.1e-6579.66Show/hide
Query:  MIKVPQVAFRRVLPLFVHRNEQFSIVSQQFTTNCVRTAAVSAAITTTTATCVRSKSSNVLKFSYVNGRSSNWGSSRNMCVRATQVNDSGSIDSPLMQSME
        MIKVPQ+AFRRVLP+ + RN+ FS+VS+Q T+NCV TAAV A IT+ + T +RSKSSNV+K+S  NG    WGSSRN+ +RATQVN+SGSIDSPLMQSME
Subjt:  MIKVPQVAFRRVLPLFVHRNEQFSIVSQQFTTNCVRTAAVSAAITTTTATCVRSKSSNVLKFSYVNGRSSNWGSSRNMCVRATQVNDSGSIDSPLMQSME

Query:  NKVIKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQIS
        NK IKEQL+AQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEA AQ S
Subjt:  NKVIKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQIS

A0A5A7UJH5 Protein BOLA44.7e-6579.66Show/hide
Query:  MIKVPQVAFRRVLPLFVHRNEQFSIVSQQFTTNCVRTAAVSAAITTTTATCVRSKSSNVLKFSYVNGRSSNWGSSRNMCVRATQVNDSGSIDSPLMQSME
        MIKVPQ+AFRRVLP+ + RN+ FS+VS+Q T+NCV TAAV A IT+ + T +RSKSSNV+K+S  NG    WGSSRN  +RATQVN+SGSIDSPLMQSME
Subjt:  MIKVPQVAFRRVLPLFVHRNEQFSIVSQQFTTNCVRTAAVSAAITTTTATCVRSKSSNVLKFSYVNGRSSNWGSSRNMCVRATQVNDSGSIDSPLMQSME

Query:  NKVIKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQIS
        NK IKEQL+AQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEA AQ S
Subjt:  NKVIKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQIS

A0A6J1H464 protein BOLA4, chloroplastic/mitochondrial6.3e-8699.44Show/hide
Query:  MIKVPQVAFRRVLPLFVHRNEQFSIVSQQFTTNCVRTAAVSAAITTTTATCVRSKSSNVLKFSYVNGRSSNWGSSRNMCVRATQVNDSGSIDSPLMQSME
        MIKVPQVAFRRVLPLFVHRNEQFSIVSQQFTTNCVRTAAVSAAITTTTATCVRSKSSNVLKFSYVNGRSSNWGSSRNMCVRATQVNDSGSIDSPLMQSME
Subjt:  MIKVPQVAFRRVLPLFVHRNEQFSIVSQQFTTNCVRTAAVSAAITTTTATCVRSKSSNVLKFSYVNGRSSNWGSSRNMCVRATQVNDSGSIDSPLMQSME

Query:  NKVIKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQIS
        NK IKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQIS
Subjt:  NKVIKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQIS

A0A6J1K139 protein BOLA4, chloroplastic/mitochondrial6.1e-8196.05Show/hide
Query:  MIKVPQVAFRRVLPLFVHRNEQFSIVSQQFTTNCVRTAAVSAAITTTTATCVRSKSSNVLKFSYVNGRSSNWGSSRNMCVRATQVNDSGSIDSPLMQSME
        MIKVPQVAFRRVLPLFVHRNEQF IVSQQFTTNCVRTAAVSAAITTTTAT V SKSSNVLKFSYVNGR SNWGSSRNMCVRATQVNDSGSIDSPLMQSME
Subjt:  MIKVPQVAFRRVLPLFVHRNEQFSIVSQQFTTNCVRTAAVSAAITTTTATCVRSKSSNVLKFSYVNGRSSNWGSSRNMCVRATQVNDSGSIDSPLMQSME

Query:  NKVIKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQIS
        NK IKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTP EAEAQ S
Subjt:  NKVIKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQIS

SwissProt top hitse value%identityAlignment
Q84W65 SufE-like protein 1, chloroplastic/mitochondrial9.9e-0431.18Show/hide
Query:  GSIDSPLMQSMENKVIKEQLEAQSVS--------VKDAYGDG--RHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAE
        GS    + + +E ++   +LE + VS        V+ + GD    H ++ +VS AF+G++ V R R++Y  + +EL+S +HA+  +  +TPAE
Subjt:  GSIDSPLMQSMENKVIKEQLEAQSVS--------VKDAYGDG--RHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAE

Q9D8S9 BolA-like protein 17.6e-0433.72Show/hide
Query:  SGSIDSPLMQSMENKVIKEQLEAQSVSVKDAY--GDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAE
        +G +++ +   +E  +  E LE ++ S   A   G   H  + VVSS FEG + + R R+V++A+ EEL   VHA+  +  +TPA+
Subjt:  SGSIDSPLMQSMENKVIKEQLEAQSVSVKDAY--GDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAE

Q9LF68 Protein BOLA4, chloroplastic/mitochondrial1.4e-2957.14Show/hide
Query:  TNCVRTAAVSAAITTTTATCVRSKSSNVLKFSYVNGRSSNWGSSRNMCVRATQVNDSGSIDSPLMQSMENKVIKEQLEAQSVSVKDAYGDGRHVSIDVVS
        TN    +AV +   T  ++   ++ S V  F  ++ RS N+ +      +++Q+ND+GSID  LMQSME K IKEQL A+SV+V D  GDGRHV I+VVS
Subjt:  TNCVRTAAVSAAITTTTATCVRSKSSNVLKFSYVNGRSSNWGSSRNMCVRATQVNDSGSIDSPLMQSMENKVIKEQLEAQSVSVKDAYGDGRHVSIDVVS

Query:  SAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAE
        SAFEGQ+AVNRQRMVYKAIWEELQ+ VHAVDQMTT+TP+E
Subjt:  SAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAE

Arabidopsis top hitse value%identityAlignment
AT1G55805.1 BolA-like family protein2.7e-0426.81Show/hide
Query:  VRSKSSNVLKFSYVNGRSSNWGS-SRNMCVRATQV--NDSGSID---SPLMQSMENKVIKEQLEAQSVS--------VKDAYGDGRHVSIDVVSSAFEGQ
        V S S  +    + N  S + G+ SR++ + + +   +DSG+I+   S + + ++ ++   +L  + VS        +K    D  H ++ +VS  FEG 
Subjt:  VRSKSSNVLKFSYVNGRSSNWGS-SRNMCVRATQV--NDSGSID---SPLMQSMENKVIKEQLEAQSVS--------VKDAYGDGRHVSIDVVSSAFEGQ

Query:  TAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQ
          V R R+VY  + EEL + +HA+  + ++TP+E+ ++
Subjt:  TAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQ

AT4G26500.1 chloroplast sulfur E7.0e-0531.18Show/hide
Query:  GSIDSPLMQSMENKVIKEQLEAQSVS--------VKDAYGDG--RHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAE
        GS    + + +E ++   +LE + VS        V+ + GD    H ++ +VS AF+G++ V R R++Y  + +EL+S +HA+  +  +TPAE
Subjt:  GSIDSPLMQSMENKVIKEQLEAQSVS--------VKDAYGDG--RHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAE

AT5G17560.1 BolA-like family protein9.7e-3157.14Show/hide
Query:  TNCVRTAAVSAAITTTTATCVRSKSSNVLKFSYVNGRSSNWGSSRNMCVRATQVNDSGSIDSPLMQSMENKVIKEQLEAQSVSVKDAYGDGRHVSIDVVS
        TN    +AV +   T  ++   ++ S V  F  ++ RS N+ +      +++Q+ND+GSID  LMQSME K IKEQL A+SV+V D  GDGRHV I+VVS
Subjt:  TNCVRTAAVSAAITTTTATCVRSKSSNVLKFSYVNGRSSNWGSSRNMCVRATQVNDSGSIDSPLMQSMENKVIKEQLEAQSVSVKDAYGDGRHVSIDVVS

Query:  SAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAE
        SAFEGQ+AVNRQRMVYKAIWEELQ+ VHAVDQMTT+TP+E
Subjt:  SAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTAAGGTTCCGCAAGTCGCGTTCCGTCGGGTTCTTCCACTATTTGTTCACCGAAACGAACAGTTTTCTATTGTTTCCCAACAATTCACGACCAACTGTGTCCGCAC
CGCCGCCGTTTCCGCTGCAATCACTACAACAACCGCCACTTGTGTCCGTAGTAAGAGTAGTAATGTTTTGAAATTTAGTTATGTTAATGGAAGATCCTCAAATTGGGGTT
CAAGTCGGAACATGTGTGTTAGAGCCACTCAAGTGAATGACTCTGGATCTATCGATTCCCCGCTTATGCAGTCAATGGAGAACAAGGTAATTAAGGAACAATTAGAAGCA
CAATCTGTATCAGTAAAAGATGCTTATGGAGATGGACGACATGTTAGCATTGATGTTGTTTCTTCTGCCTTTGAGGGACAAACGGCTGTTAATAGGCAGAGGATGGTGTA
CAAAGCTATTTGGGAGGAGCTACAGAGCACAGTCCATGCAGTGGATCAGATGACAACCAGAACACCCGCTGAAGCAGAAGCTCAGATCTCGTAA
mRNA sequenceShow/hide mRNA sequence
TTATAACTCAGCCTGGGTGTTAAGCGTGTGCAGACCATACATCAAAGATCAACCAAGAACTCGGTAGAACAAACCAATCAAGTAAGAGCAGTTCGATCGATTCAGCCGCG
GCTAAGACTTCGACGAGGATGATTAAGGTTCCGCAAGTCGCGTTCCGTCGGGTTCTTCCACTATTTGTTCACCGAAACGAACAGTTTTCTATTGTTTCCCAACAATTCAC
GACCAACTGTGTCCGCACCGCCGCCGTTTCCGCTGCAATCACTACAACAACCGCCACTTGTGTCCGTAGTAAGAGTAGTAATGTTTTGAAATTTAGTTATGTTAATGGAA
GATCCTCAAATTGGGGTTCAAGTCGGAACATGTGTGTTAGAGCCACTCAAGTGAATGACTCTGGATCTATCGATTCCCCGCTTATGCAGTCAATGGAGAACAAGGTAATT
AAGGAACAATTAGAAGCACAATCTGTATCAGTAAAAGATGCTTATGGAGATGGACGACATGTTAGCATTGATGTTGTTTCTTCTGCCTTTGAGGGACAAACGGCTGTTAA
TAGGCAGAGGATGGTGTACAAAGCTATTTGGGAGGAGCTACAGAGCACAGTCCATGCAGTGGATCAGATGACAACCAGAACACCCGCTGAAGCAGAAGCTCAGATCTCGT
AACTCTAAAAGTTTGTCCAACCCTTATCTTTGCCAATAAATGTCTTACAATTAAAGTATGCACTTATTATTCCCTTTCAGCAATTGATTAATGGCACAAATCTTATGTTC
GATCTTTCATTCAAGATTGGTGGTCAAGGAATCAACCTGTGTTTTTTTTACATGGTTATCCAAAACCTGTCTCCATGTTTTTTCCTTGAAATATCAAACATCATCCTTAT
TAACTTAAAATATCATTCCCAGCCAAATCGTATTACC
Protein sequenceShow/hide protein sequence
MIKVPQVAFRRVLPLFVHRNEQFSIVSQQFTTNCVRTAAVSAAITTTTATCVRSKSSNVLKFSYVNGRSSNWGSSRNMCVRATQVNDSGSIDSPLMQSMENKVIKEQLEA
QSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQIS