; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh02G010650 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G010650
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptioncysteine and histidine-rich domain-containing protein RAR1
Genome locationCmo_Chr02:6499913..6502003
RNA-Seq ExpressionCmoCh02G010650
SyntenyCmoCh02G010650
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR007051 - CHORD domain
IPR043316 - Cysteine and histidine-rich domain-containing protein RAR1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7035618.1 Cysteine and histidine-rich domain-containing protein RAR1 [Cucurbita argyrosperma subsp. argyrosperma]3.3e-91100Show/hide
Query:  CKTGKHTTEKPVLTKPTTSVKKPSPAPVSSMTNTLGKESCARCRQGFFCSDHGSQVQGNNKSINQASNLPPASNIDSQVSPAPAKKTVGINEPQICKNKG
        CKTGKHTTEKPVLTKPTTSVKKPSPAPVSSMTNTLGKESCARCRQGFFCSDHGSQVQGNNKSINQASNLPPASNIDSQVSPAPAKKTVGINEPQICKNKG
Subjt:  CKTGKHTTEKPVLTKPTTSVKKPSPAPVSSMTNTLGKESCARCRQGFFCSDHGSQVQGNNKSINQASNLPPASNIDSQVSPAPAKKTVGINEPQICKNKG

Query:  CGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTHGWHNADSA
        CGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTHGWHNADSA
Subjt:  CGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTHGWHNADSA

XP_022957825.1 cysteine and histidine-rich domain-containing protein RAR1 [Cucurbita moschata]3.3e-91100Show/hide
Query:  CKTGKHTTEKPVLTKPTTSVKKPSPAPVSSMTNTLGKESCARCRQGFFCSDHGSQVQGNNKSINQASNLPPASNIDSQVSPAPAKKTVGINEPQICKNKG
        CKTGKHTTEKPVLTKPTTSVKKPSPAPVSSMTNTLGKESCARCRQGFFCSDHGSQVQGNNKSINQASNLPPASNIDSQVSPAPAKKTVGINEPQICKNKG
Subjt:  CKTGKHTTEKPVLTKPTTSVKKPSPAPVSSMTNTLGKESCARCRQGFFCSDHGSQVQGNNKSINQASNLPPASNIDSQVSPAPAKKTVGINEPQICKNKG

Query:  CGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTHGWHNADSA
        CGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTHGWHNADSA
Subjt:  CGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTHGWHNADSA

XP_022995761.1 cysteine and histidine-rich domain-containing protein RAR1 [Cucurbita maxima]5.2e-8997.5Show/hide
Query:  CKTGKHTTEKPVLTKPTTSVKKPSPAPVSSMTNTLGKESCARCRQGFFCSDHGSQVQGNNKSINQASNLPPASNIDSQVSPAPAKKTVGINEPQICKNKG
        CKTGKHTTEKPVLTKPTTSVKKPSPAPVSSMTNTLGKESCARCRQGFFCSDHGSQV+GNNKSINQ SNLPPASNIDSQVSPAPAKKTVGINEPQICKNKG
Subjt:  CKTGKHTTEKPVLTKPTTSVKKPSPAPVSSMTNTLGKESCARCRQGFFCSDHGSQVQGNNKSINQASNLPPASNIDSQVSPAPAKKTVGINEPQICKNKG

Query:  CGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTHGWHNADSA
        CGK FTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTHGWH ADSA
Subjt:  CGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTHGWHNADSA

XP_023533461.1 cysteine and histidine-rich domain-containing protein RAR1 isoform X1 [Cucurbita pepo subsp. pepo]6.2e-9098.75Show/hide
Query:  CKTGKHTTEKPVLTKPTTSVKKPSPAPVSSMTNTLGKESCARCRQGFFCSDHGSQVQGNNKSINQASNLPPASNIDSQVSPAPAKKTVGINEPQICKNKG
        CKTGKHTTEKPVLTKPTTSVKKPSPAPVSSMTNTLGKESCARCRQGFFCSDHGSQVQGNNKSINQASN+PPASNIDSQVSPAPAKKTVGINEPQICKNKG
Subjt:  CKTGKHTTEKPVLTKPTTSVKKPSPAPVSSMTNTLGKESCARCRQGFFCSDHGSQVQGNNKSINQASNLPPASNIDSQVSPAPAKKTVGINEPQICKNKG

Query:  CGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTHGWHNADSA
        CGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCT GWHNADSA
Subjt:  CGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTHGWHNADSA

XP_023533462.1 cysteine and histidine-rich domain-containing protein RAR1 isoform X2 [Cucurbita pepo subsp. pepo]6.2e-9098.75Show/hide
Query:  CKTGKHTTEKPVLTKPTTSVKKPSPAPVSSMTNTLGKESCARCRQGFFCSDHGSQVQGNNKSINQASNLPPASNIDSQVSPAPAKKTVGINEPQICKNKG
        CKTGKHTTEKPVLTKPTTSVKKPSPAPVSSMTNTLGKESCARCRQGFFCSDHGSQVQGNNKSINQASN+PPASNIDSQVSPAPAKKTVGINEPQICKNKG
Subjt:  CKTGKHTTEKPVLTKPTTSVKKPSPAPVSSMTNTLGKESCARCRQGFFCSDHGSQVQGNNKSINQASNLPPASNIDSQVSPAPAKKTVGINEPQICKNKG

Query:  CGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTHGWHNADSA
        CGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCT GWHNADSA
Subjt:  CGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTHGWHNADSA

TrEMBL top hitse value%identityAlignment
A0A0A0LKX0 Uncharacterized protein3.8e-6976.88Show/hide
Query:  CKTGKHTTEKPVLTKPTTSVKKPSPAPVSSMTNTLGKESCARCRQGFFCSDHGSQVQGNNKSINQASNLPPASNIDSQVSPAPAKKTVGINEPQICKNKG
        CKTGKHTTEKPVLTKPTT VKKPSP   SSMTNTLGKE CARC+QGFFCSDHG+Q++GNNKSIN+ S +P ASN D+Q      KK +G+NEPQICKNKG
Subjt:  CKTGKHTTEKPVLTKPTTSVKKPSPAPVSSMTNTLGKESCARCRQGFFCSDHGSQVQGNNKSINQASNLPPASNIDSQVSPAPAKKTVGINEPQICKNKG

Query:  CGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTHGWHNADSA
        CGKTFTEM+NHDTACSYHPGP VFHDR+RGW+CC++HVKEFDEFM+I PC+ GWHNA  A
Subjt:  CGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTHGWHNADSA

A0A1S3B5A5 LOW QUALITY PROTEIN: cysteine and histidine-rich domain-containing protein RAR12.8e-7280Show/hide
Query:  CKTGKHTTEKPVLTKPTTSVKKPSPAPVSSMTNTLGKESCARCRQGFFCSDHGSQVQGNNKSINQASNLPPASNIDSQVSPAPAKKTVGINEPQICKNKG
        CKTGKHTTEKPVLTKPTT+VKK SP P+SSMTNTLGKESCARC+QGFFCSDHG+Q++G NKSIN+ S +P ASN D+Q    P KK +GINEPQICKNKG
Subjt:  CKTGKHTTEKPVLTKPTTSVKKPSPAPVSSMTNTLGKESCARCRQGFFCSDHGSQVQGNNKSINQASNLPPASNIDSQVSPAPAKKTVGINEPQICKNKG

Query:  CGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTHGWHNADSA
        CGKTFTEM+NH+TACSYHPGP VFHDRLRGW+CC++HVKEFDEFMEIPPC+ GWHNAD A
Subjt:  CGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTHGWHNADSA

A0A6J1DZH1 cysteine and histidine-rich domain-containing protein RAR13.4e-7883.75Show/hide
Query:  CKTGKHTTEKPVLTKPTTSVKKPSPAPVSSMTNTLGKESCARCRQGFFCSDHGSQVQGNNKSINQASNLPPASNIDSQVSPAPAKKTVGINEPQICKNKG
        CKTGKHTTE+PVL+KP+T+VKKPSPAPVSS+TNTLGKESCARCRQGFFCSDHGSQV+G+NKS N+AS LP  +N DSQ +PAPAKK +GINEPQICKNKG
Subjt:  CKTGKHTTEKPVLTKPTTSVKKPSPAPVSSMTNTLGKESCARCRQGFFCSDHGSQVQGNNKSINQASNLPPASNIDSQVSPAPAKKTVGINEPQICKNKG

Query:  CGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTHGWHNADSA
        CGKTFTEM+NHDTAC++HPGP VFHDRLRGWKCCD+HVKEFDEFMEI PCT GWHNAD A
Subjt:  CGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTHGWHNADSA

A0A6J1H1M2 cysteine and histidine-rich domain-containing protein RAR11.6e-91100Show/hide
Query:  CKTGKHTTEKPVLTKPTTSVKKPSPAPVSSMTNTLGKESCARCRQGFFCSDHGSQVQGNNKSINQASNLPPASNIDSQVSPAPAKKTVGINEPQICKNKG
        CKTGKHTTEKPVLTKPTTSVKKPSPAPVSSMTNTLGKESCARCRQGFFCSDHGSQVQGNNKSINQASNLPPASNIDSQVSPAPAKKTVGINEPQICKNKG
Subjt:  CKTGKHTTEKPVLTKPTTSVKKPSPAPVSSMTNTLGKESCARCRQGFFCSDHGSQVQGNNKSINQASNLPPASNIDSQVSPAPAKKTVGINEPQICKNKG

Query:  CGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTHGWHNADSA
        CGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTHGWHNADSA
Subjt:  CGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTHGWHNADSA

A0A6J1K2T7 cysteine and histidine-rich domain-containing protein RAR12.5e-8997.5Show/hide
Query:  CKTGKHTTEKPVLTKPTTSVKKPSPAPVSSMTNTLGKESCARCRQGFFCSDHGSQVQGNNKSINQASNLPPASNIDSQVSPAPAKKTVGINEPQICKNKG
        CKTGKHTTEKPVLTKPTTSVKKPSPAPVSSMTNTLGKESCARCRQGFFCSDHGSQV+GNNKSINQ SNLPPASNIDSQVSPAPAKKTVGINEPQICKNKG
Subjt:  CKTGKHTTEKPVLTKPTTSVKKPSPAPVSSMTNTLGKESCARCRQGFFCSDHGSQVQGNNKSINQASNLPPASNIDSQVSPAPAKKTVGINEPQICKNKG

Query:  CGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTHGWHNADSA
        CGK FTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTHGWH ADSA
Subjt:  CGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTHGWHNADSA

SwissProt top hitse value%identityAlignment
A9YUB1 Cysteine and histidine-rich domain-containing protein 12.3e-1548.44Show/hide
Query:  ICKNKGCGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTHGWHNAD
        +C N+GCG+ F    N D AC+YHPG  VFHD L+GW CC     +F +F+ I  CT G HN++
Subjt:  ICKNKGCGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTHGWHNAD

Q29RL2 Cysteine and histidine-rich domain-containing protein 13.1e-1548.44Show/hide
Query:  ICKNKGCGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTHGWHNAD
        +C N+GCG+ F    N D AC+YHPG  VFHD L+GW CC     +F +F+ I  CT G HN++
Subjt:  ICKNKGCGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTHGWHNAD

Q6EPW7 Cysteine and histidine-rich domain-containing protein RAR12.6e-5460.87Show/hide
Query:  CKTGKHTTEKPVLTKPTTSVKKPSPA-PVSSMTNTLGKESCARCRQGFFCSDHGSQVQGNNKSINQASNLPPASNIDSQVSPAPAKKTVGINEPQICKNK
        CKTGKHTTEKP+     T   KPS A PV +   ++G ++C+RCRQGFFCSDHGSQ +    +    +N+ P   ++    P P KK + +NEP++CKNK
Subjt:  CKTGKHTTEKPVLTKPTTSVKKPSPA-PVSSMTNTLGKESCARCRQGFFCSDHGSQVQGNNKSINQASNLPPASNIDSQVSPAPAKKTVGINEPQICKNK

Query:  GCGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTHGWHNADSA
        GCGKT+ E DNHD AC YHPGPAVF DR+RGWKCCD+HVKEFDEFMEIPPCT GWHNAD+A
Subjt:  GCGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTHGWHNADSA

Q9SE33 Cysteine and histidine-rich domain-containing protein RAR17.4e-5463.75Show/hide
Query:  CKTGKHTTEKPVLTKPTTSVKKPSPAPVSSM-TNTLGKESCARCRQGFFCSDHGSQVQGNNKSINQASNLPPASNID--SQVSPAPAKKTVGINEPQICK
        CKTGKHTTEKPVL K     K P  AP SS   N   K+SC+RCRQGFFCSDHGSQ +   + I Q  N P  +  +    ++P   K  + IN+PQ+CK
Subjt:  CKTGKHTTEKPVLTKPTTSVKKPSPAPVSSM-TNTLGKESCARCRQGFFCSDHGSQVQGNNKSINQASNLPPASNID--SQVSPAPAKKTVGINEPQICK

Query:  NKGCGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTHGWHNA
        NKGCG+TF E DNH+TACS+HPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCT GWH++
Subjt:  NKGCGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTHGWHNA

Q9UHD1 Cysteine and histidine-rich domain-containing protein 13.1e-1548.44Show/hide
Query:  ICKNKGCGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTHGWHNAD
        +C N+GCG+ F    N D AC+YHPG  VFHD L+GW CC     +F +F+ I  CT G HN++
Subjt:  ICKNKGCGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTHGWHNAD

Arabidopsis top hitse value%identityAlignment
AT5G51700.1 protein binding;zinc ion binding5.3e-5563.75Show/hide
Query:  CKTGKHTTEKPVLTKPTTSVKKPSPAPVSSM-TNTLGKESCARCRQGFFCSDHGSQVQGNNKSINQASNLPPASNID--SQVSPAPAKKTVGINEPQICK
        CKTGKHTTEKPVL K     K P  AP SS   N   K+SC+RCRQGFFCSDHGSQ +   + I Q  N P  +  +    ++P   K  + IN+PQ+CK
Subjt:  CKTGKHTTEKPVLTKPTTSVKKPSPAPVSSM-TNTLGKESCARCRQGFFCSDHGSQVQGNNKSINQASNLPPASNID--SQVSPAPAKKTVGINEPQICK

Query:  NKGCGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTHGWHNA
        NKGCG+TF E DNH+TACS+HPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCT GWH++
Subjt:  NKGCGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTHGWHNA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACACGCTTAGATGCAAGACCGGAAAACATACAACGGAAAAGCCAGTTTTGACCAAGCCTACCACGTCCGTGAAGAAGCCAAGTCCGGCTCCTGTGTCTTCCATGAC
AAATACATTAGGAAAAGAGTCATGCGCTAGGTGCCGGCAAGGTTTCTTTTGTTCAGATCATGGTTCACAAGTCCAAGGCAATAACAAATCTATTAATCAAGCCTCAAATT
TACCCCCTGCAAGCAATATAGATTCTCAGGTCTCGCCTGCTCCAGCAAAAAAGACAGTAGGCATAAATGAACCTCAGATCTGCAAGAATAAGGGATGTGGTAAAACTTTC
ACAGAGATGGATAATCATGACACTGCCTGTAGTTACCATCCCGGACCTGCAGTCTTTCATGACCGGCTGAGAGGGTGGAAATGCTGCGACGTTCACGTTAAGGAATTTGA
CGAGTTTATGGAAATTCCACCCTGCACTCATGGTTGGCACAATGCAGATTCAGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGAACACGCTTAGATGCAAGACCGGAAAACATACAACGGAAAAGCCAGTTTTGACCAAGCCTACCACGTCCGTGAAGAAGCCAAGTCCGGCTCCTGTGTCTTCCATGAC
AAATACATTAGGAAAAGAGTCATGCGCTAGGTGCCGGCAAGGTTTCTTTTGTTCAGATCATGGTTCACAAGTCCAAGGCAATAACAAATCTATTAATCAAGCCTCAAATT
TACCCCCTGCAAGCAATATAGATTCTCAGGTCTCGCCTGCTCCAGCAAAAAAGACAGTAGGCATAAATGAACCTCAGATCTGCAAGAATAAGGGATGTGGTAAAACTTTC
ACAGAGATGGATAATCATGACACTGCCTGTAGTTACCATCCCGGACCTGCAGTCTTTCATGACCGGCTGAGAGGGTGGAAATGCTGCGACGTTCACGTTAAGGAATTTGA
CGAGTTTATGGAAATTCCACCCTGCACTCATGGTTGGCACAATGCAGATTCAGCATAACTATACAACAGAGGCGGATGAGGAGAAATATCTGTGGAGATCAAGGTACCCT
CATCAAGCATATATACAAAATGAAGCTGCGTGTTGTTTCTGCATTTCGCGTTCTACTCTCTCGATTGAACTTTTAAATTGATCATAGAGAGATGTGCTTGCATATGTCTT
GACCGTCGAATGTTATGAACTGCTGATCCTGCAATATAACAGTCTTAACCCTTGGAAGCTATATAATTGATATCATCATATTCGCTACAAATGCTCATTTTATGTGTGGT
TTCAATAATTGAACATTGCACTCTCCTGTCATCTGTGATAGAAAATGACAGTTTGACTGAGTGAGTGATATTGTATCCATTACATGTTCTATCTGTTCTAACTTCCACGA
GTTTCAATTTCAATATAGGGTTTCCTCTTTGATAGGATTGTGTATATTGGGAATTTCAGCTACTTTTGTTACTGCTGCATATGAAGCTCTTTGCAACGGTAATTTCTTAT
TTTATTTTACCCATTTGATTACGTTTTTATCTCTTTTATCTTTTTGGTTTGTGAGAAGGAAATACTGAAGCCTATTTCTGTT
Protein sequenceShow/hide protein sequence
MNTLRCKTGKHTTEKPVLTKPTTSVKKPSPAPVSSMTNTLGKESCARCRQGFFCSDHGSQVQGNNKSINQASNLPPASNIDSQVSPAPAKKTVGINEPQICKNKGCGKTF
TEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTHGWHNADSA