| GenBank top hits | e value | %identity | Alignment |
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| KAG6605739.1 putative RNA-binding protein 18, partial [Cucurbita argyrosperma subsp. sororia] | 3.8e-100 | 97.97 | Show/hide |
Query: MVMDSSGFVDEKCESKLYIGNLDLRITEAALIKMFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKESMHGKLACSRPLVVRLASEKLVI
MVMDSSGFVDEKCESKLYIGNLDLRITEAALIKMFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKE+MHGKLACSRPLVVRLASEKLVI
Subjt: MVMDSSGFVDEKCESKLYIGNLDLRITEAALIKMFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKESMHGKLACSRPLVVRLASEKLVI
Query: NTTNNNNTSRAAGETSKSRPSGSNYGHMSRSDKIAAIKNKLRALEGGEGERSGVKKQKQGQANLIRSAKLYYDANIQHIALWPDDIILDMRLSFLLH
NTT NNNTSRAAGETSKSRPSGSNYGHMSRSDKIAAIKNKLRALEGGEGERSGVKKQKQGQANLIRSAKLYYDANIQHIALWPDD ILDMR SFLLH
Subjt: NTTNNNNTSRAAGETSKSRPSGSNYGHMSRSDKIAAIKNKLRALEGGEGERSGVKKQKQGQANLIRSAKLYYDANIQHIALWPDDIILDMRLSFLLH
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| XP_022958043.1 probable RNA-binding protein 18 isoform X1 [Cucurbita moschata] | 5.1e-81 | 97.53 | Show/hide |
Query: VMDSSGFVDEKCESKLYIGNLDLRITEAALIKMFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKESMHGKLACSRPLVVRLASEKLVIN
++DSSGFVDEKCESKLYIGNLDLRITEAALIKMFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKESMHGKLACSRPLVVRLASEKLVIN
Subjt: VMDSSGFVDEKCESKLYIGNLDLRITEAALIKMFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKESMHGKLACSRPLVVRLASEKLVIN
Query: TTNNNNTSRAAGETSKSRPSGSNYGHMSRSDKIAAIKNKLRALEGGEGERSGVKKQKQGQAN
TTNNNNTSRAAGETSKSRPSGSNYGHMSRSDKIAAIKNKLRALEGGEGERSGVKKQKQGQ +
Subjt: TTNNNNTSRAAGETSKSRPSGSNYGHMSRSDKIAAIKNKLRALEGGEGERSGVKKQKQGQAN
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| XP_022958046.1 probable RNA-binding protein 18 isoform X2 [Cucurbita moschata] | 3.5e-82 | 98.77 | Show/hide |
Query: MVMDSSGFVDEKCESKLYIGNLDLRITEAALIKMFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKESMHGKLACSRPLVVRLASEKLVI
MVMDSSGFVDEKCESKLYIGNLDLRITEAALIKMFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKESMHGKLACSRPLVVRLASEKLVI
Subjt: MVMDSSGFVDEKCESKLYIGNLDLRITEAALIKMFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKESMHGKLACSRPLVVRLASEKLVI
Query: NTTNNNNTSRAAGETSKSRPSGSNYGHMSRSDKIAAIKNKLRALEGGEGERSGVKKQKQGQAN
NTTNNNNTSRAAGETSKSRPSGSNYGHMSRSDKIAAIKNKLRALEGGEGERSGVKKQKQGQ +
Subjt: NTTNNNNTSRAAGETSKSRPSGSNYGHMSRSDKIAAIKNKLRALEGGEGERSGVKKQKQGQAN
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| XP_022958047.1 probable RNA-binding protein 18 isoform X3 [Cucurbita moschata] | 5.1e-81 | 98.76 | Show/hide |
Query: MDSSGFVDEKCESKLYIGNLDLRITEAALIKMFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKESMHGKLACSRPLVVRLASEKLVINT
MDSSGFVDEKCESKLYIGNLDLRITEAALIKMFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKESMHGKLACSRPLVVRLASEKLVINT
Subjt: MDSSGFVDEKCESKLYIGNLDLRITEAALIKMFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKESMHGKLACSRPLVVRLASEKLVINT
Query: TNNNNTSRAAGETSKSRPSGSNYGHMSRSDKIAAIKNKLRALEGGEGERSGVKKQKQGQAN
TNNNNTSRAAGETSKSRPSGSNYGHMSRSDKIAAIKNKLRALEGGEGERSGVKKQKQGQ +
Subjt: TNNNNTSRAAGETSKSRPSGSNYGHMSRSDKIAAIKNKLRALEGGEGERSGVKKQKQGQAN
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| XP_023534515.1 probable RNA-binding protein 18 isoform X2 [Cucurbita pepo subsp. pepo] | 6.7e-81 | 96.93 | Show/hide |
Query: MVMDSSGFVDEKCESKLYIGNLDLRITEAALIKMFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKESMHGKLACSRPLVVRLASEKLVI
MVMDSSGFVDEKCESKLYIGNLDLRITEAALIKMFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKE+MHGKLACSRPLVVRLASEKLVI
Subjt: MVMDSSGFVDEKCESKLYIGNLDLRITEAALIKMFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKESMHGKLACSRPLVVRLASEKLVI
Query: NTTNNNNTSRAAGETSKSRPSGSNYGHMSRSDKIAAIKNKLRALEGGEGERSGVKKQKQGQAN
NTTNNNNTSR GETSKSRPSGSNYGHMSRSDKIAAIKNKLRALEGGEGERSGVKKQKQGQ +
Subjt: NTTNNNNTSRAAGETSKSRPSGSNYGHMSRSDKIAAIKNKLRALEGGEGERSGVKKQKQGQAN
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A6J1H0U8 probable RNA-binding protein 18 isoform X3 | 2.5e-81 | 98.76 | Show/hide |
Query: MDSSGFVDEKCESKLYIGNLDLRITEAALIKMFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKESMHGKLACSRPLVVRLASEKLVINT
MDSSGFVDEKCESKLYIGNLDLRITEAALIKMFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKESMHGKLACSRPLVVRLASEKLVINT
Subjt: MDSSGFVDEKCESKLYIGNLDLRITEAALIKMFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKESMHGKLACSRPLVVRLASEKLVINT
Query: TNNNNTSRAAGETSKSRPSGSNYGHMSRSDKIAAIKNKLRALEGGEGERSGVKKQKQGQAN
TNNNNTSRAAGETSKSRPSGSNYGHMSRSDKIAAIKNKLRALEGGEGERSGVKKQKQGQ +
Subjt: TNNNNTSRAAGETSKSRPSGSNYGHMSRSDKIAAIKNKLRALEGGEGERSGVKKQKQGQAN
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| A0A6J1H0X4 probable RNA-binding protein 18 isoform X2 | 1.7e-82 | 98.77 | Show/hide |
Query: MVMDSSGFVDEKCESKLYIGNLDLRITEAALIKMFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKESMHGKLACSRPLVVRLASEKLVI
MVMDSSGFVDEKCESKLYIGNLDLRITEAALIKMFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKESMHGKLACSRPLVVRLASEKLVI
Subjt: MVMDSSGFVDEKCESKLYIGNLDLRITEAALIKMFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKESMHGKLACSRPLVVRLASEKLVI
Query: NTTNNNNTSRAAGETSKSRPSGSNYGHMSRSDKIAAIKNKLRALEGGEGERSGVKKQKQGQAN
NTTNNNNTSRAAGETSKSRPSGSNYGHMSRSDKIAAIKNKLRALEGGEGERSGVKKQKQGQ +
Subjt: NTTNNNNTSRAAGETSKSRPSGSNYGHMSRSDKIAAIKNKLRALEGGEGERSGVKKQKQGQAN
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| A0A6J1H211 probable RNA-binding protein 18 isoform X1 | 2.5e-81 | 97.53 | Show/hide |
Query: VMDSSGFVDEKCESKLYIGNLDLRITEAALIKMFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKESMHGKLACSRPLVVRLASEKLVIN
++DSSGFVDEKCESKLYIGNLDLRITEAALIKMFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKESMHGKLACSRPLVVRLASEKLVIN
Subjt: VMDSSGFVDEKCESKLYIGNLDLRITEAALIKMFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKESMHGKLACSRPLVVRLASEKLVIN
Query: TTNNNNTSRAAGETSKSRPSGSNYGHMSRSDKIAAIKNKLRALEGGEGERSGVKKQKQGQAN
TTNNNNTSRAAGETSKSRPSGSNYGHMSRSDKIAAIKNKLRALEGGEGERSGVKKQKQGQ +
Subjt: TTNNNNTSRAAGETSKSRPSGSNYGHMSRSDKIAAIKNKLRALEGGEGERSGVKKQKQGQAN
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| A0A6J1K0K5 probable RNA-binding protein 18 isoform X1 | 2.6e-78 | 93.9 | Show/hide |
Query: VMDSSGFVDEKCESKLYIGNLDLRITEAALIKMFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKESMHGKLACSRPLVVRLASEKLVIN
++DSSGFVDEKCESKLYIGNLDLRITEAALIKMFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKE+MHGKLACSRPLVVRLASEKL+IN
Subjt: VMDSSGFVDEKCESKLYIGNLDLRITEAALIKMFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKESMHGKLACSRPLVVRLASEKLVIN
Query: TT--NNNNTSRAAGETSKSRPSGSNYGHMSRSDKIAAIKNKLRALEGGEGERSGVKKQKQGQAN
TT NNNNTSR AGETSKSRPSGSNYGHMSRSDKIAAIKNKLRALEGGEGERSG+KKQKQGQ +
Subjt: TT--NNNNTSRAAGETSKSRPSGSNYGHMSRSDKIAAIKNKLRALEGGEGERSGVKKQKQGQAN
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| A0A6J1K5I1 probable RNA-binding protein 18 isoform X2 | 1.8e-79 | 95.15 | Show/hide |
Query: MVMDSSGFVDEKCESKLYIGNLDLRITEAALIKMFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKESMHGKLACSRPLVVRLASEKLVI
MVMDSSGFVDEKCESKLYIGNLDLRITEAALIKMFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKE+MHGKLACSRPLVVRLASEKL+I
Subjt: MVMDSSGFVDEKCESKLYIGNLDLRITEAALIKMFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKESMHGKLACSRPLVVRLASEKLVI
Query: NTT--NNNNTSRAAGETSKSRPSGSNYGHMSRSDKIAAIKNKLRALEGGEGERSGVKKQKQGQAN
NTT NNNNTSR AGETSKSRPSGSNYGHMSRSDKIAAIKNKLRALEGGEGERSG+KKQKQGQ +
Subjt: NTT--NNNNTSRAAGETSKSRPSGSNYGHMSRSDKIAAIKNKLRALEGGEGERSGVKKQKQGQAN
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| Q5R6W3 Probable RNA-binding protein 18 | 1.7e-15 | 38.93 | Show/hide |
Query: KLYIGNLDLRITEAALIKMFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKESMHGKLACSRPLVVRLASEKLVINTTNNNN--TSRAAG
+L+IGNLD +ITE L+K+ FGK+ DFL+H G G+PRG+ F+ + +K+EA+ A + ++GKLA S+ LVVR A ++ N N+ +
Subjt: KLYIGNLDLRITEAALIKMFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKESMHGKLACSRPLVVRLASEKLVINTTNNNN--TSRAAG
Query: ETSKSRPSGSNYGHMSRSDKIAAIKNKLRAL
+S + P+ SN +S + KI AI+ KL+ +
Subjt: ETSKSRPSGSNYGHMSRSDKIAAIKNKLRAL
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| Q66J99 Probable RNA-binding protein 18 | 5.1e-15 | 38.93 | Show/hide |
Query: KLYIGNLDLRITEAALIKMFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKESMHGKLACSRPLVVRLASE--KLVINTTNNNNTSRAAG
+L+IGN+D +ITE L+K+ FGK+ DFL+H GP G+PRG+ F+ + +K EA+ A ++GK+A S+ LVVR A K N N +
Subjt: KLYIGNLDLRITEAALIKMFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKESMHGKLACSRPLVVRLASE--KLVINTTNNNNTSRAAG
Query: ETSKSRPSGSNYGHMSRSDKIAAIKNKLRAL
+S + P+ S +S S KI AI+ KL+ +
Subjt: ETSKSRPSGSNYGHMSRSDKIAAIKNKLRAL
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| Q6PBM8 Probable RNA-binding protein 18 | 2.3e-15 | 39.13 | Show/hide |
Query: KLYIGNLDLRITEAALIKMFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKESMHGKLACSRPLVVRLASEKLVINTTNNNNTSRAAGET
+L+IGN+D +ITE L+K+ FGK+ DFL+H GP G+PRG+ F+ + +KEEA+ A + ++GKLA S+ LVVR A + N A+ E
Subjt: KLYIGNLDLRITEAALIKMFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKESMHGKLACSRPLVVRLASEKLVINTTNNNNTSRAAGET
Query: SKSRPSGSNYGHMSRSDKIAAIKNKLRALEGGEGERSG
S S +S + KI AI+ KL+ +E + SG
Subjt: SKSRPSGSNYGHMSRSDKIAAIKNKLRALEGGEGERSG
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| Q96H35 Probable RNA-binding protein 18 | 1.7e-15 | 38.93 | Show/hide |
Query: KLYIGNLDLRITEAALIKMFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKESMHGKLACSRPLVVRLASEKLVINTTNNNN--TSRAAG
+L+IGNLD +ITE L+K+ FGK+ DFL+H G G+PRG+ F+ + +K+EA+ A + ++GKLA S+ LVVR A ++ N N+ +
Subjt: KLYIGNLDLRITEAALIKMFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKESMHGKLACSRPLVVRLASEKLVINTTNNNN--TSRAAG
Query: ETSKSRPSGSNYGHMSRSDKIAAIKNKLRAL
+S + P+ SN +S + KI AI+ KL+ +
Subjt: ETSKSRPSGSNYGHMSRSDKIAAIKNKLRAL
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| Q9CR83 Probable RNA-binding protein 18 | 1.7e-15 | 38.93 | Show/hide |
Query: KLYIGNLDLRITEAALIKMFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKESMHGKLACSRPLVVRLASEKLVINTTNNNN--TSRAAG
+L+IGNLD +ITE L+K+ FGK+ DFL+H G G+PRG+ F+ + +K+EA+ A + ++GKLA S+ LVVR A ++ N N+ +
Subjt: KLYIGNLDLRITEAALIKMFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKESMHGKLACSRPLVVRLASEKLVINTTNNNN--TSRAAG
Query: ETSKSRPSGSNYGHMSRSDKIAAIKNKLRAL
+S + P+ SN +S + KI AI+ KL+ +
Subjt: ETSKSRPSGSNYGHMSRSDKIAAIKNKLRAL
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G71770.1 poly(A)-binding protein 5 | 1.1e-09 | 39.76 | Show/hide |
Query: SKLYIGNLDLRITEAALIKMFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKESMHGKLACSRPLVVRLASEK
S LY+ NLD + + L +MFS +G + S + +++G RGF F+ YS+ EEA LA + M+GK+ +PL V LA K
Subjt: SKLYIGNLDLRITEAALIKMFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKESMHGKLACSRPLVVRLASEK
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| AT1G71770.2 poly(A)-binding protein 5 | 1.1e-09 | 39.76 | Show/hide |
Query: SKLYIGNLDLRITEAALIKMFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKESMHGKLACSRPLVVRLASEK
S LY+ NLD + + L +MFS +G + S + +++G RGF F+ YS+ EEA LA + M+GK+ +PL V LA K
Subjt: SKLYIGNLDLRITEAALIKMFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKESMHGKLACSRPLVVRLASEK
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| AT3G16380.1 poly(A) binding protein 6 | 1.2e-08 | 36.14 | Show/hide |
Query: SKLYIGNLDLRITEAALIKMFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKESMHGKLACSRPLVVRLASEK
S LY+ NL + E L ++F +G+I+S + H + G +GF F+ +S+ EE+K AK ++G L +P+VVR+A K
Subjt: SKLYIGNLDLRITEAALIKMFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKESMHGKLACSRPLVVRLASEK
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| AT5G03580.1 RNA-binding (RRM/RBD/RNP motifs) family protein | 9.5e-09 | 42.68 | Show/hide |
Query: SKLYIGNLDLRITEAALIKMFSPFGKII----SEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKESMHGKLACSRPLVVR
+ LYI NLD +++E L MFS FGK+I ++DF RGE RGFAFIE+ S + A A M G+L + L V+
Subjt: SKLYIGNLDLRITEAALIKMFSPFGKII----SEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKESMHGKLACSRPLVVR
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| AT5G52545.1 unknown protein | 3.5e-11 | 51.85 | Show/hide |
Query: MHGKLACSRPLVVRLASEKLVINTTNNNNTSRAAGETSKSR-PSGSNYGHMSRSDKIAAIKNKLRALEGGEGERSGVKKQK
MHG+LAC RPLVVRLASEK + ++++++ R+ E +++R +GS+ G MSR +K+ AIKNKL+ALE E E+ KKQK
Subjt: MHGKLACSRPLVVRLASEKLVINTTNNNNTSRAAGETSKSR-PSGSNYGHMSRSDKIAAIKNKLRALEGGEGERSGVKKQK
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