; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh02G011140 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G011140
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionprotein timeless homolog
Genome locationCmo_Chr02:6759977..6761668
RNA-Seq ExpressionCmoCh02G011140
SyntenyCmoCh02G011140
Gene Ontology termsGO:0005634 - nucleus (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605759.1 Protein timeless-like protein, partial [Cucurbita argyrosperma subsp. sororia]1.9e-2688Show/hide
Query:  EDSNQARRLEPMGVGKVPSDDVHLNDFTEVEGKDAEAGVSMDDELADSEGETDSNVYRATATTGRKFRMVVIEME
        EDSNQA RLEPMGVGKVPSDDV LNDFTEVEGKDAEAGVSMDDELADSEGE D+NVYRA+ATTGRKFR+V +E E
Subjt:  EDSNQARRLEPMGVGKVPSDDVHLNDFTEVEGKDAEAGVSMDDELADSEGETDSNVYRATATTGRKFRMVVIEME

KAG7022464.1 hypothetical protein SDJN02_16195 [Cucurbita argyrosperma subsp. argyrosperma]1.9e-2688Show/hide
Query:  EDSNQARRLEPMGVGKVPSDDVHLNDFTEVEGKDAEAGVSMDDELADSEGETDSNVYRATATTGRKFRMVVIEME
        EDSNQA RLEPMGVGKVPSDDV LNDFTEVEGKDAEAGVSMDDELADSEGE D+NVYRA+ATTGRKFR+V +E E
Subjt:  EDSNQARRLEPMGVGKVPSDDVHLNDFTEVEGKDAEAGVSMDDELADSEGETDSNVYRATATTGRKFRMVVIEME

XP_022957784.1 protein timeless homolog isoform X1 [Cucurbita moschata]1.6e-33100Show/hide
Query:  EDSNQARRLEPMGVGKVPSDDVHLNDFTEVEGKDAEAGVSMDDELADSEGETDSNVYRATATTGRKFRMVVIEMEMAR
        EDSNQARRLEPMGVGKVPSDDVHLNDFTEVEGKDAEAGVSMDDELADSEGETDSNVYRATATTGRKFRMVVIEMEMAR
Subjt:  EDSNQARRLEPMGVGKVPSDDVHLNDFTEVEGKDAEAGVSMDDELADSEGETDSNVYRATATTGRKFRMVVIEMEMAR

XP_022995214.1 protein timeless homolog [Cucurbita maxima]2.1e-2585.33Show/hide
Query:  EDSNQARRLEPMGVGKVPSDDVHLNDFTEVEGKDAEAGVSMDDELADSEGETDSNVYRATATTGRKFRMVVIEME
        EDSNQA RLEPMGVGK+PSDDV LNDFTEVEGKDAE GVSMDDELADSEGE DSNV+RA+ATTGRKFR+V +E E
Subjt:  EDSNQARRLEPMGVGKVPSDDVHLNDFTEVEGKDAEAGVSMDDELADSEGETDSNVYRATATTGRKFRMVVIEME

XP_023533520.1 protein timeless homolog [Cucurbita pepo subsp. pepo]1.9e-2688Show/hide
Query:  EDSNQARRLEPMGVGKVPSDDVHLNDFTEVEGKDAEAGVSMDDELADSEGETDSNVYRATATTGRKFRMVVIEME
        EDSNQA RLEPMGVGKVPSDDV LNDFTEVEGKDAEAGVSMDDELADSEGE D+NVYRA+ATTGRKFR+V +E E
Subjt:  EDSNQARRLEPMGVGKVPSDDVHLNDFTEVEGKDAEAGVSMDDELADSEGETDSNVYRATATTGRKFRMVVIEME

TrEMBL top hitse value%identityAlignment
A0A5A7TKU9 Protein timeless-like protein5.9e-1361.9Show/hide
Query:  EDSNQARRLEPMGVGKVPSDDVHLNDFTEVEGKDAEAG-VSMD--------DELADSEGETDSNVYRATATTGRKFRMVVIEME
        ED NQAR L+ MGVG  PSDDV LNDFTE +GKDAEAG VSMD        DE ADS+ E   +VYR   TTGRKFR+V +E E
Subjt:  EDSNQARRLEPMGVGKVPSDDVHLNDFTEVEGKDAEAG-VSMD--------DELADSEGETDSNVYRATATTGRKFRMVVIEME

A0A6J1DTS2 protein timeless homolog1.1e-1458.82Show/hide
Query:  QEDSNQARRLEPMGVGKVP-SDDVHLNDFTEVEGKDAEAGVSM--------DDELADSEGETDSNVYRATATTGRKFRMVVIEME
        +EDSNQA RLEP+GVGKVP  D++ L DFTE++GKDAE G+SM        D+E  DSE E   +VYRA+ATTGRK R+V +E E
Subjt:  QEDSNQARRLEPMGVGKVP-SDDVHLNDFTEVEGKDAEAGVSM--------DDELADSEGETDSNVYRATATTGRKFRMVVIEME

A0A6J1H072 protein timeless homolog isoform X21.8e-2586.67Show/hide
Query:  EDSNQARRLEPMGVGKVPSDDVHLNDFTEVEGKDAEAGVSMDDELADSEGETDSNVYRATATTGRKFRMVVIEME
        EDSNQA RLEPMGVGKV SDDV LNDFTEVEGKDAEAGVSMDDELADSEGE DSNV+RA+ATTGRKFR+V +E E
Subjt:  EDSNQARRLEPMGVGKVPSDDVHLNDFTEVEGKDAEAGVSMDDELADSEGETDSNVYRATATTGRKFRMVVIEME

A0A6J1H2Z9 protein timeless homolog isoform X17.9e-34100Show/hide
Query:  EDSNQARRLEPMGVGKVPSDDVHLNDFTEVEGKDAEAGVSMDDELADSEGETDSNVYRATATTGRKFRMVVIEMEMAR
        EDSNQARRLEPMGVGKVPSDDVHLNDFTEVEGKDAEAGVSMDDELADSEGETDSNVYRATATTGRKFRMVVIEMEMAR
Subjt:  EDSNQARRLEPMGVGKVPSDDVHLNDFTEVEGKDAEAGVSMDDELADSEGETDSNVYRATATTGRKFRMVVIEMEMAR

A0A6J1K533 protein timeless homolog1.0e-2585.33Show/hide
Query:  EDSNQARRLEPMGVGKVPSDDVHLNDFTEVEGKDAEAGVSMDDELADSEGETDSNVYRATATTGRKFRMVVIEME
        EDSNQA RLEPMGVGK+PSDDV LNDFTEVEGKDAE GVSMDDELADSEGE DSNV+RA+ATTGRKFR+V +E E
Subjt:  EDSNQARRLEPMGVGKVPSDDVHLNDFTEVEGKDAEAGVSMDDELADSEGETDSNVYRATATTGRKFRMVVIEME

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAATGGGTTCCTCCGCTATTTTCGGATTCTGATTGATCCGGCGCTTCACCAATGTCGGCTGCAACAAACCCTTGTTGCCATTCTCTCTTCTTTCGCTCTGCTCCT
CCCAATTCCAGTTCGGTTCGAATATGATTCTTATGGAGGGCTATTCCTTCTTCGAAGTCAGCCAATCCAGGAGGACAGCAACCAAGCGAGGAGGTTGGAACCTATGGGGG
TTGGTAAAGTGCCTTCCGATGATGTTCACTTGAATGACTTCACAGAAGTTGAAGGTAAGGATGCTGAAGCTGGCGTCAGTATGGATGATGAGCTTGCAGATTCTGAAGGT
GAAACGGATTCTAATGTGTATCGTGCAACTGCTACAACTGGAAGAAAGTTTAGGATGGTTGTGATTGAGATGGAAATGGCCAGGTTTGTTCTCTTTGTATTTGCTTTACT
TTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTAATGGGTTCCTCCGCTATTTTCGGATTCTGATTGATCCGGCGCTTCACCAATGTCGGCTGCAACAAACCCTTGTTGCCATTCTCTCTTCTTTCGCTCTGCTCCT
CCCAATTCCAGTTCGGTTCGAATATGATTCTTATGGAGGGCTATTCCTTCTTCGAAGTCAGCCAATCCAGGAGGACAGCAACCAAGCGAGGAGGTTGGAACCTATGGGGG
TTGGTAAAGTGCCTTCCGATGATGTTCACTTGAATGACTTCACAGAAGTTGAAGGTAAGGATGCTGAAGCTGGCGTCAGTATGGATGATGAGCTTGCAGATTCTGAAGGT
GAAACGGATTCTAATGTGTATCGTGCAACTGCTACAACTGGAAGAAAGTTTAGGATGGTTGTGATTGAGATGGAAATGGCCAGGTTTGTTCTCTTTGTATTTGCTTTACT
TTGA
Protein sequenceShow/hide protein sequence
MSNGFLRYFRILIDPALHQCRLQQTLVAILSSFALLLPIPVRFEYDSYGGLFLLRSQPIQEDSNQARRLEPMGVGKVPSDDVHLNDFTEVEGKDAEAGVSMDDELADSEG
ETDSNVYRATATTGRKFRMVVIEMEMARFVLFVFALL