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CmoCh02G011270 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G011270
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptiontranscription factor TRY-like
Genome locationCmo_Chr02:6840178..6840854
RNA-Seq ExpressionCmoCh02G011270
SyntenyCmoCh02G011270
Gene Ontology termsGO:0030154 - cell differentiation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_016898876.1 PREDICTED: transcription factor TRY [Cucumis melo]5.7e-3691.46Show/hide
Query:  MDNHRSQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRRG
        MDNHR Q+QAK +PL+SEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGF  RRRG
Subjt:  MDNHRSQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRRG

XP_022958649.1 transcription factor TRY-like [Cucurbita moschata]1.1e-39100Show/hide
Query:  MDNHRSQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRRG
        MDNHRSQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRRG
Subjt:  MDNHRSQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRRG

XP_022996343.1 transcription factor TRY-like [Cucurbita maxima]2.5e-3998.78Show/hide
Query:  MDNHRSQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRRG
        MDNHR+QQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRRG
Subjt:  MDNHRSQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRRG

XP_031742154.1 transcription factor TRY [Cucumis sativus]1.3e-3591.46Show/hide
Query:  MDNHRSQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRRG
        MDNHR Q+ AK +PLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGF  RRRG
Subjt:  MDNHRSQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRRG

XP_038875738.1 transcription factor TRY [Benincasa hispida]1.3e-3592.68Show/hide
Query:  MDNHRSQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRRG
        MDNHR Q+QAK T LESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGF  RRRG
Subjt:  MDNHRSQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRRG

TrEMBL top hitse value%identityAlignment
A0A1S4DSB1 transcription factor TRY2.8e-3691.46Show/hide
Query:  MDNHRSQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRRG
        MDNHR Q+QAK +PL+SEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGF  RRRG
Subjt:  MDNHRSQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRRG

A0A5D3C2B2 Transcription factor TRY2.8e-3691.46Show/hide
Query:  MDNHRSQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRRG
        MDNHR Q+QAK +PL+SEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGF  RRRG
Subjt:  MDNHRSQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRRG

A0A6J1H5Q3 transcription factor TRY-like5.4e-40100Show/hide
Query:  MDNHRSQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRRG
        MDNHRSQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRRG
Subjt:  MDNHRSQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRRG

A0A6J1KAI4 transcription factor TRY-like1.2e-3998.78Show/hide
Query:  MDNHRSQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRRG
        MDNHR+QQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRRG
Subjt:  MDNHRSQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRRG

I6NF75 R3 MYB transcription factor6.1e-3691.46Show/hide
Query:  MDNHRSQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRRG
        MDNHR Q+ AK +PLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGF  RRRG
Subjt:  MDNHRSQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRRG

SwissProt top hitse value%identityAlignment
B3H4X8 MYB-like transcription factor TCL24.6e-2057.14Show/hide
Query:  RSQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRR
        RS++Q+K T  ++ EV+S +W+FI MT QEEDLI RMH+L+GDRWDLIAGR+ GR+ ++IERYWIM + +  + +RR
Subjt:  RSQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRR

O22059 Transcription factor CPC5.4e-2162.34Show/hide
Query:  RSQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRR
        R ++Q+K     SEEVSS  W+ + M+ +EEDLI RM+KL+GDRW+LIAGRIPGR PEEIERYW+M H   FA RRR
Subjt:  RSQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRR

Q84RD1 MYB-like transcription factor ETC21.3e-1965.15Show/hide
Query:  ESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRR
        +SEEVSS  W+FI+MT QEEDLI RM++L+G+RWDLIAGR+ GRK  EIERYWIM + + F+ +RR
Subjt:  ESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRR

Q8GV05 Transcription factor TRY8.0e-2566.25Show/hide
Query:  DNHRSQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRR
        D  R ++Q K    +SEEVSS  W+FI MT QEEDLI RM++L+GDRWDLIAGR+PGR+PEEIERYWIM + EGFA +RR
Subjt:  DNHRSQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRR

Q9M157 MYB-like transcription factor ETC31.7e-1960.27Show/hide
Query:  MDNHRSQQQAKTTPL---ESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIM
        MDNHR  +Q KT  +    SEEVSS  W+ + M+ +EEDL+ RMHKL+GDRW+LIAGRIPGR   EIER+W+M
Subjt:  MDNHRSQQQAKTTPL---ESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIM

Arabidopsis top hitse value%identityAlignment
AT2G30420.1 Homeodomain-like superfamily protein9.4e-2165.15Show/hide
Query:  ESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRR
        +SEEVSS  W+FI+MT QEEDLI RM++L+G+RWDLIAGR+ GRK  EIERYWIM + + F+ +RR
Subjt:  ESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRR

AT2G30424.1 Homeodomain-like superfamily protein3.2e-2157.14Show/hide
Query:  RSQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRR
        RS++Q+K T  ++ EV+S +W+FI MT QEEDLI RMH+L+GDRWDLIAGR+ GR+ ++IERYWIM + +  + +RR
Subjt:  RSQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRR

AT2G46410.1 Homeodomain-like superfamily protein3.8e-2262.34Show/hide
Query:  RSQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRR
        R ++Q+K     SEEVSS  W+ + M+ +EEDLI RM+KL+GDRW+LIAGRIPGR PEEIERYW+M H   FA RRR
Subjt:  RSQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRR

AT4G01060.2 CAPRICE-like MYB33.6e-2059.72Show/hide
Query:  MDNHRSQQQAKTTPL--ESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIM
        MDNHR  +Q KT  +   S EVSS  W+ + M+ +EEDL+ RMHKL+GDRW+LIAGRIPGR   EIER+W+M
Subjt:  MDNHRSQQQAKTTPL--ESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIM

AT5G53200.1 Homeodomain-like superfamily protein5.7e-2666.25Show/hide
Query:  DNHRSQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRR
        D  R ++Q K    +SEEVSS  W+FI MT QEEDLI RM++L+GDRWDLIAGR+PGR+PEEIERYWIM + EGFA +RR
Subjt:  DNHRSQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAACCATCGTAGCCAGCAACAAGCTAAAACAACTCCACTAGAGTCTGAAGAAGTCAGCAGCACTAGGTGGCAGTTTATAACGATGACAGCACAGGAGGAAGATCT
CATCCATAGAATGCATAAGCTGATTGGAGATAGGTGGGATCTGATAGCAGGCAGAATTCCAGGGCGTAAACCAGAAGAAATAGAGAGGTATTGGATAATGACTCACCTTG
AAGGGTTTGCAGTGAGAAGAAGAGGGTGA
mRNA sequenceShow/hide mRNA sequence
GCAGAAGAAAATATAGGCAGCATTCACATGAACTTAAATTTCCCTGTGGAAGTTTCAGATCTCTCTATCATAGTTTTTCCTAAAATTCTTTTCATTCCCAGTTCTCTATC
TTCCTGTTTTTGTGCTGCCTCTAATCTTTGGGGGGGAACATGGACAACCATCGTAGCCAGCAACAAGCTAAAACAACTCCACTAGAGTCTGAAGAAGTCAGCAGCACTAG
GTGGCAGTTTATAACGATGACAGCACAGGAGGAAGATCTCATCCATAGAATGCATAAGCTGATTGGAGATAGGTGGGATCTGATAGCAGGCAGAATTCCAGGGCGTAAAC
CAGAAGAAATAGAGAGGTATTGGATAATGACTCACCTTGAAGGGTTTGCAGTGAGAAGAAGAGGGTGAAAAAAGACAGGGG
Protein sequenceShow/hide protein sequence
MDNHRSQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRRG