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CmoCh02G011540 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G011540
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionacyl-CoA-binding domain-containing protein 1-like
Genome locationCmo_Chr02:6984789..6986935
RNA-Seq ExpressionCmoCh02G011540
SyntenyCmoCh02G011540
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0000062 - fatty-acyl-CoA binding (molecular function)
GO:0005515 - protein binding (molecular function)
GO:0008289 - lipid binding (molecular function)
InterPro domainsIPR002110 - Ankyrin repeat
IPR036770 - Ankyrin repeat-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004145936.1 acyl-CoA-binding domain-containing protein 1 isoform X1 [Cucumis sativus]3.4e-2977.78Show/hide
Query:  HWIV--GHSNVVELHVSRNADIDVKEVDGQTPLHYAIVCVRVGIAEYLVKNNASINEKDNDGKWPCDLCEFNWPFMVSTGK
        HW V  GHSNVVE+ VSRNADIDVK+VDGQTPLHYA+VC R GIAEYLVKNNA+++EKDN+GK PCD+CE NWPFMVS  K
Subjt:  HWIV--GHSNVVELHVSRNADIDVKEVDGQTPLHYAIVCVRVGIAEYLVKNNASINEKDNDGKWPCDLCEFNWPFMVSTGK

XP_008437617.1 PREDICTED: acyl-CoA-binding domain-containing protein 1 isoform X1 [Cucumis melo]5.3e-3080.25Show/hide
Query:  HWIV--GHSNVVELHVSRNADIDVKEVDGQTPLHYAIVCVRVGIAEYLVKNNASINEKDNDGKWPCDLCEFNWPFMVSTGK
        HW V  GHSNVVEL VSRNADIDVK+VDGQTPLHYA+VC R GIAEYLVKNNAS++E+DNDGK PCD+CE NWPFMVS  K
Subjt:  HWIV--GHSNVVELHVSRNADIDVKEVDGQTPLHYAIVCVRVGIAEYLVKNNASINEKDNDGKWPCDLCEFNWPFMVSTGK

XP_008437618.1 PREDICTED: acyl-CoA-binding domain-containing protein 1 isoform X2 [Cucumis melo]5.3e-3080.25Show/hide
Query:  HWIV--GHSNVVELHVSRNADIDVKEVDGQTPLHYAIVCVRVGIAEYLVKNNASINEKDNDGKWPCDLCEFNWPFMVSTGK
        HW V  GHSNVVEL VSRNADIDVK+VDGQTPLHYA+VC R GIAEYLVKNNAS++E+DNDGK PCD+CE NWPFMVS  K
Subjt:  HWIV--GHSNVVELHVSRNADIDVKEVDGQTPLHYAIVCVRVGIAEYLVKNNASINEKDNDGKWPCDLCEFNWPFMVSTGK

XP_011654606.1 acyl-CoA-binding domain-containing protein 1 isoform X2 [Cucumis sativus]3.4e-2977.78Show/hide
Query:  HWIV--GHSNVVELHVSRNADIDVKEVDGQTPLHYAIVCVRVGIAEYLVKNNASINEKDNDGKWPCDLCEFNWPFMVSTGK
        HW V  GHSNVVE+ VSRNADIDVK+VDGQTPLHYA+VC R GIAEYLVKNNA+++EKDN+GK PCD+CE NWPFMVS  K
Subjt:  HWIV--GHSNVVELHVSRNADIDVKEVDGQTPLHYAIVCVRVGIAEYLVKNNASINEKDNDGKWPCDLCEFNWPFMVSTGK

XP_023533274.1 acyl-CoA-binding domain-containing protein 2-like isoform X1 [Cucurbita pepo subsp. pepo]2.7e-3490.12Show/hide
Query:  IGHWIVGHSNVVELHVSRNADIDVKEVDGQTPLHYAIVCVRVGIAEYLVKNNASINEKDNDGKWPCDLCEFNWPFMVSTGK
        IG W  GHSNVVEL VSRNADIDVKEVDGQTPLHYAIVC RV IAEYLVKNNASINEKDNDGKWPCDLCEFNWPFMV  GK
Subjt:  IGHWIVGHSNVVELHVSRNADIDVKEVDGQTPLHYAIVCVRVGIAEYLVKNNASINEKDNDGKWPCDLCEFNWPFMVSTGK

TrEMBL top hitse value%identityAlignment
A0A0A0KN62 Uncharacterized protein1.7e-2977.78Show/hide
Query:  HWIV--GHSNVVELHVSRNADIDVKEVDGQTPLHYAIVCVRVGIAEYLVKNNASINEKDNDGKWPCDLCEFNWPFMVSTGK
        HW V  GHSNVVE+ VSRNADIDVK+VDGQTPLHYA+VC R GIAEYLVKNNA+++EKDN+GK PCD+CE NWPFMVS  K
Subjt:  HWIV--GHSNVVELHVSRNADIDVKEVDGQTPLHYAIVCVRVGIAEYLVKNNASINEKDNDGKWPCDLCEFNWPFMVSTGK

A0A1S3AU47 acyl-CoA-binding domain-containing protein 1 isoform X12.6e-3080.25Show/hide
Query:  HWIV--GHSNVVELHVSRNADIDVKEVDGQTPLHYAIVCVRVGIAEYLVKNNASINEKDNDGKWPCDLCEFNWPFMVSTGK
        HW V  GHSNVVEL VSRNADIDVK+VDGQTPLHYA+VC R GIAEYLVKNNAS++E+DNDGK PCD+CE NWPFMVS  K
Subjt:  HWIV--GHSNVVELHVSRNADIDVKEVDGQTPLHYAIVCVRVGIAEYLVKNNASINEKDNDGKWPCDLCEFNWPFMVSTGK

A0A1S3AUK9 acyl-CoA-binding domain-containing protein 1 isoform X22.6e-3080.25Show/hide
Query:  HWIV--GHSNVVELHVSRNADIDVKEVDGQTPLHYAIVCVRVGIAEYLVKNNASINEKDNDGKWPCDLCEFNWPFMVSTGK
        HW V  GHSNVVEL VSRNADIDVK+VDGQTPLHYA+VC R GIAEYLVKNNAS++E+DNDGK PCD+CE NWPFMVS  K
Subjt:  HWIV--GHSNVVELHVSRNADIDVKEVDGQTPLHYAIVCVRVGIAEYLVKNNASINEKDNDGKWPCDLCEFNWPFMVSTGK

A0A5D3C3R6 Acyl-CoA-binding domain-containing protein 1 isoform X12.6e-3080.25Show/hide
Query:  HWIV--GHSNVVELHVSRNADIDVKEVDGQTPLHYAIVCVRVGIAEYLVKNNASINEKDNDGKWPCDLCEFNWPFMVSTGK
        HW V  GHSNVVEL VSRNADIDVK+VDGQTPLHYA+VC R GIAEYLVKNNAS++E+DNDGK PCD+CE NWPFMVS  K
Subjt:  HWIV--GHSNVVELHVSRNADIDVKEVDGQTPLHYAIVCVRVGIAEYLVKNNASINEKDNDGKWPCDLCEFNWPFMVSTGK

A0A6J1I6A7 acyl-CoA-binding domain-containing protein 1-like4.8e-2979.01Show/hide
Query:  HWIV--GHSNVVELHVSRNADIDVKEVDGQTPLHYAIVCVRVGIAEYLVKNNASINEKDNDGKWPCDLCEFNWPFMVSTGK
        HW V  GHSNVVEL VSRNADI+ K++DGQTPLHYA+VC R  IAEYLVKNNA+INEKDNDGK PCDLCE  WPFMVS GK
Subjt:  HWIV--GHSNVVELHVSRNADIDVKEVDGQTPLHYAIVCVRVGIAEYLVKNNASINEKDNDGKWPCDLCEFNWPFMVSTGK

SwissProt top hitse value%identityAlignment
A3AYR1 Acyl-CoA-binding domain-containing protein 41.9e-1448.68Show/hide
Query:  HWIV--GHSNVVELHVSRNADIDVKEVDGQTPLHYAIVCVRVGIAEYLVKNNASINEKDNDGKWPCDLCEFNWPFM
        HW V  GH N VE+ V+ NAD++ ++ +GQT LHYA++C R  IAE LVK++A +  KD DG    +LC  +W FM
Subjt:  HWIV--GHSNVVELHVSRNADIDVKEVDGQTPLHYAIVCVRVGIAEYLVKNNASINEKDNDGKWPCDLCEFNWPFM

Q4V8X4 Acyl-CoA-binding domain-containing protein 65.0e-0740Show/hide
Query:  HWIV--GHSNVVELHVSRNADIDVKEVDGQTPLHYAIVCVRVGIAEYLVKNNASINEKDNDGKWPCDLCE
        HW    GH ++V L +  NADI+ ++ +GQT LHYA  C    I E L+K  A  + KD +G  P ++ E
Subjt:  HWIV--GHSNVVELHVSRNADIDVKEVDGQTPLHYAIVCVRVGIAEYLVKNNASINEKDNDGKWPCDLCE

Q9J5I3 Putative ankyrin repeat protein FPV0182.2e-0728.74Show/hide
Query:  VGHSNVVELHVSRNADIDVKEVDGQTPLHYAIVCVRVGIAEYLVKNNASINEKDNDGKWPCDLCE-----FNWPFMVSTGKYIDAYD
        +  S +  L +++ AD++V+   G+TP+H A +  ++G  + L+KN A++NE+DN G  P  +C       N  ++++ G  ++  D
Subjt:  VGHSNVVELHVSRNADIDVKEVDGQTPLHYAIVCVRVGIAEYLVKNNASINEKDNDGKWPCDLCE-----FNWPFMVSTGKYIDAYD

Q9SM23 Acyl-CoA-binding domain-containing protein 11.5e-1651.32Show/hide
Query:  HWIV--GHSNVVELHVSRNADIDVKEVDGQTPLHYAIVCVRVGIAEYLVKNNASINEKDNDGKWPCDLCEFNWPFM
        HW +  GH NV E  V +NAD++ K+ +GQT LHYA+VC R  +AE+LVK  A    KD DG  P DLCE  W +M
Subjt:  HWIV--GHSNVVELHVSRNADIDVKEVDGQTPLHYAIVCVRVGIAEYLVKNNASINEKDNDGKWPCDLCEFNWPFM

Q9STP8 Acyl-CoA-binding domain-containing protein 21.1e-1950Show/hide
Query:  HWIV--GHSNVVELHVSRNADIDVKEVDGQTPLHYAIVCVRVGIAEYLVKNNASINEKDNDGKWPCDLCEFNWPFMVSTGKYID
        HW +  GH N+ ++ V +NAD++ K+ +GQTPLHYA+VC R  IAE+LVK NA+   KD DG  P DLCE +WP++  + K  D
Subjt:  HWIV--GHSNVVELHVSRNADIDVKEVDGQTPLHYAIVCVRVGIAEYLVKNNASINEKDNDGKWPCDLCEFNWPFMVSTGKYID

Arabidopsis top hitse value%identityAlignment
AT2G03430.1 Ankyrin repeat family protein2.3e-0732.14Show/hide
Query:  VGHSNVVELHVSRNADIDVKEVDGQTPLHYAIVCVRVGIAEYLVKNNASINEKDNDGKWP---------CDLCEFNWPFMVSTGKYIDAYDLHFDIDFSG
        +G++ +VE+ ++R AD++ K   G+T LHYA    R+ IA+ L+ + A IN  D  G  P          ++CE    F++  G  IDA D         
Subjt:  VGHSNVVELHVSRNADIDVKEVDGQTPLHYAIVCVRVGIAEYLVKNNASINEKDNDGKWP---------CDLCEFNWPFMVSTGKYIDAYDLHFDIDFSG

Query:  EILGKLALLASV
          +G+ AL+ SV
Subjt:  EILGKLALLASV

AT3G24530.1 AAA-type ATPase family protein / ankyrin repeat family protein9.0e-0432.31Show/hide
Query:  GHSNVVELHVSRNADIDVKEVDGQTPLH----YAIVCVRVGIAEYLVKNNASINEKDNDGKWPCD
        G +   +L +   A I+ K  +G TPLH    Y+I    +   + L+ +NA  + KDN+G  P D
Subjt:  GHSNVVELHVSRNADIDVKEVDGQTPLH----YAIVCVRVGIAEYLVKNNASINEKDNDGKWPCD

AT4G27780.1 acyl-CoA binding protein 28.1e-2150Show/hide
Query:  HWIV--GHSNVVELHVSRNADIDVKEVDGQTPLHYAIVCVRVGIAEYLVKNNASINEKDNDGKWPCDLCEFNWPFMVSTGKYID
        HW +  GH N+ ++ V +NAD++ K+ +GQTPLHYA+VC R  IAE+LVK NA+   KD DG  P DLCE +WP++  + K  D
Subjt:  HWIV--GHSNVVELHVSRNADIDVKEVDGQTPLHYAIVCVRVGIAEYLVKNNASINEKDNDGKWPCDLCEFNWPFMVSTGKYID

AT5G40160.1 Ankyrin repeat family protein1.4e-0431.33Show/hide
Query:  VGHSNVVELHVSRNADIDVKEVDGQTPLHYAIVCVRVGIAEYLVKNNASINEKDNDGKWPCDLCEFNWPFMVSTGKYIDAYDL
        VG    V+L    N D++V + +G TPLH A+      I + L+ N A    +  DGK   DL        +  G+   +YDL
Subjt:  VGHSNVVELHVSRNADIDVKEVDGQTPLHYAIVCVRVGIAEYLVKNNASINEKDNDGKWPCDLCEFNWPFMVSTGKYIDAYDL

AT5G53470.1 acyl-CoA binding protein 11.1e-1751.32Show/hide
Query:  HWIV--GHSNVVELHVSRNADIDVKEVDGQTPLHYAIVCVRVGIAEYLVKNNASINEKDNDGKWPCDLCEFNWPFM
        HW +  GH NV E  V +NAD++ K+ +GQT LHYA+VC R  +AE+LVK  A    KD DG  P DLCE  W +M
Subjt:  HWIV--GHSNVVELHVSRNADIDVKEVDGQTPLHYAIVCVRVGIAEYLVKNNASINEKDNDGKWPCDLCEFNWPFM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGTGATGACCAAATATGGGAATGTTTATGGTAGAAGTAAAGATACTAAAGGATTAATCGTTGATATCTCAGTTCTAACTGGATTTGTAGCTTCGACTTCACAAAA
CTATCTCTCCTCGAACATTGACAAAAAAGTTATTGTTAATCAAGAACTCTATCCAAAAAATGAAGGTCAGTTTGCGGGAAATGCACCTATTCATGATTTTCTTATGTATT
CTACTTCGTTAAGAGAAGCCCTTATTTGGGAACTACTTGGAGAAGTGAAGGAAGGACCACAGTGCATTGGGCATTGGATCGTGGGGCATTCTAATGTTGTGGAGCTGCAT
GTTAGCAGGAATGCTGATATAGATGTAAAGGAAGTCGATGGCCAAACTCCATTGCATTATGCCATTGTATGTGTTAGAGTAGGGATCGCTGAATATCTCGTCAAGAACAA
TGCCAGCATTAATGAAAAAGACAATGATGGAAAGTGGCCTTGTGATCTTTGCGAGTTTAACTGGCCTTTCATGGTCTCTACGGGAAAGTACATAGATGCCTACGATCTCC
ATTTTGATATCGATTTCTCGGGTGAGATTTTAGGAAAGCTTGCTCTACTTGCCTCGGTAACAGTTGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGTGATGACCAAATATGGGAATGTTTATGGTAGAAGTAAAGATACTAAAGGATTAATCGTTGATATCTCAGTTCTAACTGGATTTGTAGCTTCGACTTCACAAAA
CTATCTCTCCTCGAACATTGACAAAAAAGTTATTGTTAATCAAGAACTCTATCCAAAAAATGAAGGTCAGTTTGCGGGAAATGCACCTATTCATGATTTTCTTATGTATT
CTACTTCGTTAAGAGAAGCCCTTATTTGGGAACTACTTGGAGAAGTGAAGGAAGGACCACAGTGCATTGGGCATTGGATCGTGGGGCATTCTAATGTTGTGGAGCTGCAT
GTTAGCAGGAATGCTGATATAGATGTAAAGGAAGTCGATGGCCAAACTCCATTGCATTATGCCATTGTATGTGTTAGAGTAGGGATCGCTGAATATCTCGTCAAGAACAA
TGCCAGCATTAATGAAAAAGACAATGATGGAAAGTGGCCTTGTGATCTTTGCGAGTTTAACTGGCCTTTCATGGTCTCTACGGGAAAGTACATAGATGCCTACGATCTCC
ATTTTGATATCGATTTCTCGGGTGAGATTTTAGGAAAGCTTGCTCTACTTGCCTCGGTAACAGTTGCATGA
Protein sequenceShow/hide protein sequence
MSVMTKYGNVYGRSKDTKGLIVDISVLTGFVASTSQNYLSSNIDKKVIVNQELYPKNEGQFAGNAPIHDFLMYSTSLREALIWELLGEVKEGPQCIGHWIVGHSNVVELH
VSRNADIDVKEVDGQTPLHYAIVCVRVGIAEYLVKNNASINEKDNDGKWPCDLCEFNWPFMVSTGKYIDAYDLHFDIDFSGEILGKLALLASVTVA