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CmoCh02G011550 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G011550
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionacyl-CoA-binding domain-containing protein 1-like
Genome locationCmo_Chr02:6987103..6987719
RNA-Seq ExpressionCmoCh02G011550
SyntenyCmoCh02G011550
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605793.1 Importin subunit beta-1, partial [Cucurbita argyrosperma subsp. sororia]2.3e-4896.43Show/hide
Query:  RASPNRHGGVVKLISVVVSFKEDNLSTSRTTAISIQESAGGASGIKVIESDLAVFGSGSVDFGLAHEHGSVRNGGIGGRDSDDDDWEGVESTEFDELYSA
        RASPNRHGGVVKLISVVVSFKEDNLSTSRTTAISIQESAGGASGIKVIESDLAV GSG  DFGLAHEHGSVRNGGIGGRDSDDD+WEGVESTEFDELYSA
Subjt:  RASPNRHGGVVKLISVVVSFKEDNLSTSRTTAISIQESAGGASGIKVIESDLAVFGSGSVDFGLAHEHGSVRNGGIGGRDSDDDDWEGVESTEFDELYSA

Query:  ATAFVAASAFSQ
        ATAFVAASAFSQ
Subjt:  ATAFVAASAFSQ

XP_004145936.1 acyl-CoA-binding domain-containing protein 1 isoform X1 [Cucumis sativus]4.0e-2467.29Show/hide
Query:  VVKLISVVVSFKEDNLSTSRTTAISIQESAGGASGIKVIESDLAVFGSGSVDFGLAH-------EHGSVRNGGIGGRDSDDDDWEGVESTEFDELYSAAT
        V KLIS+VVSFKEDNLS SR T+  I +S  G S  K IE+D+   GSGS DFG AH       EHGSVRN  IGG D+DDDDWEGVESTE DEL+SAAT
Subjt:  VVKLISVVVSFKEDNLSTSRTTAISIQESAGGASGIKVIESDLAVFGSGSVDFGLAH-------EHGSVRNGGIGGRDSDDDDWEGVESTEFDELYSAAT

Query:  AFVAASA
        AFVAASA
Subjt:  AFVAASA

XP_011654606.1 acyl-CoA-binding domain-containing protein 1 isoform X2 [Cucumis sativus]4.0e-2467.29Show/hide
Query:  VVKLISVVVSFKEDNLSTSRTTAISIQESAGGASGIKVIESDLAVFGSGSVDFGLAH-------EHGSVRNGGIGGRDSDDDDWEGVESTEFDELYSAAT
        V KLIS+VVSFKEDNLS SR T+  I +S  G S  K IE+D+   GSGS DFG AH       EHGSVRN  IGG D+DDDDWEGVESTE DEL+SAAT
Subjt:  VVKLISVVVSFKEDNLSTSRTTAISIQESAGGASGIKVIESDLAVFGSGSVDFGLAH-------EHGSVRNGGIGGRDSDDDDWEGVESTEFDELYSAAT

Query:  AFVAASA
        AFVAASA
Subjt:  AFVAASA

XP_022922221.1 acyl-CoA-binding domain-containing protein 1-like isoform X5 [Cucurbita moschata]2.0e-2368.22Show/hide
Query:  VVKLISVVVSFKEDNLSTSRTTAISIQESAGGASGIKVIESDLAVFGSGSVDFGLAH-------EHGSVRNGGIGGRDSDDDDWEGVESTEFDELYSAAT
        V KLIS+VVSFKEDNLS SRTT  S  +S+ GAS    IE D A  GSGS DFGLAH       EHGSVRN   GG D+ DDDWEGVESTE DEL+SAAT
Subjt:  VVKLISVVVSFKEDNLSTSRTTAISIQESAGGASGIKVIESDLAVFGSGSVDFGLAH-------EHGSVRNGGIGGRDSDDDDWEGVESTEFDELYSAAT

Query:  AFVAASA
        AFVAASA
Subjt:  AFVAASA

XP_023551544.1 acyl-CoA-binding domain-containing protein 1-like [Cucurbita pepo subsp. pepo]1.5e-2366.07Show/hide
Query:  VVKLISVVVSFKEDNLSTSRTTAISIQESAGGASGIKVIESDLAVFGSGSVDFGLAH-------EHGSVRNGGIGGRDS-----DDDDWEGVESTEFDEL
        V KLIS+VVSFKEDNLS SRTT  S  +S+ GAS    IE D A  GSGS DFGLAH       EHGSVRN   GG D+     DDDDWEGVESTE DEL
Subjt:  VVKLISVVVSFKEDNLSTSRTTAISIQESAGGASGIKVIESDLAVFGSGSVDFGLAH-------EHGSVRNGGIGGRDS-----DDDDWEGVESTEFDEL

Query:  YSAATAFVAASA
        +SAATAFVAASA
Subjt:  YSAATAFVAASA

TrEMBL top hitse value%identityAlignment
A0A0A0KN62 Uncharacterized protein1.9e-2467.29Show/hide
Query:  VVKLISVVVSFKEDNLSTSRTTAISIQESAGGASGIKVIESDLAVFGSGSVDFGLAH-------EHGSVRNGGIGGRDSDDDDWEGVESTEFDELYSAAT
        V KLIS+VVSFKEDNLS SR T+  I +S  G S  K IE+D+   GSGS DFG AH       EHGSVRN  IGG D+DDDDWEGVESTE DEL+SAAT
Subjt:  VVKLISVVVSFKEDNLSTSRTTAISIQESAGGASGIKVIESDLAVFGSGSVDFGLAH-------EHGSVRNGGIGGRDSDDDDWEGVESTEFDELYSAAT

Query:  AFVAASA
        AFVAASA
Subjt:  AFVAASA

A0A1S3AUK9 acyl-CoA-binding domain-containing protein 1 isoform X21.6e-2366.36Show/hide
Query:  VVKLISVVVSFKEDNLSTSRTTAISIQESAGGASGIKVIESDLAVFGSGSVDFGLAH-------EHGSVRNGGIGGRDSDDDDWEGVESTEFDELYSAAT
        V KLIS+VVSFKEDNLS SR T+  I +S    S  K IE+D+   GSGS DFG AH       EHGSVRN  IGG D+DDDDWEGVESTE DEL+SAAT
Subjt:  VVKLISVVVSFKEDNLSTSRTTAISIQESAGGASGIKVIESDLAVFGSGSVDFGLAH-------EHGSVRNGGIGGRDSDDDDWEGVESTEFDELYSAAT

Query:  AFVAASA
        AFVAASA
Subjt:  AFVAASA

A0A5D3C3R6 Acyl-CoA-binding domain-containing protein 1 isoform X11.6e-2366.36Show/hide
Query:  VVKLISVVVSFKEDNLSTSRTTAISIQESAGGASGIKVIESDLAVFGSGSVDFGLAH-------EHGSVRNGGIGGRDSDDDDWEGVESTEFDELYSAAT
        V KLIS+VVSFKEDNLS SR T+  I +S    S  K IE+D+   GSGS DFG AH       EHGSVRN  IGG D+DDDDWEGVESTE DEL+SAAT
Subjt:  VVKLISVVVSFKEDNLSTSRTTAISIQESAGGASGIKVIESDLAVFGSGSVDFGLAH-------EHGSVRNGGIGGRDSDDDDWEGVESTEFDELYSAAT

Query:  AFVAASA
        AFVAASA
Subjt:  AFVAASA

A0A6J1E3J3 acyl-CoA-binding domain-containing protein 1-like isoform X59.6e-2468.22Show/hide
Query:  VVKLISVVVSFKEDNLSTSRTTAISIQESAGGASGIKVIESDLAVFGSGSVDFGLAH-------EHGSVRNGGIGGRDSDDDDWEGVESTEFDELYSAAT
        V KLIS+VVSFKEDNLS SRTT  S  +S+ GAS    IE D A  GSGS DFGLAH       EHGSVRN   GG D+ DDDWEGVESTE DEL+SAAT
Subjt:  VVKLISVVVSFKEDNLSTSRTTAISIQESAGGASGIKVIESDLAVFGSGSVDFGLAH-------EHGSVRNGGIGGRDSDDDDWEGVESTEFDELYSAAT

Query:  AFVAASA
        AFVAASA
Subjt:  AFVAASA

A0A6J1I6A7 acyl-CoA-binding domain-containing protein 1-like9.6e-2465.49Show/hide
Query:  VVKLISVVVSFKEDNLSTSRTTAISIQESAGGASGIKVIESDLAVFGSGSVDFGLAH-------EHGSVRNGGIGGRDS------DDDDWEGVESTEFDE
        V KLIS+VVSFKEDNLS SR+T  SI +S+ GAS    IE D A  GSGS DFGLAH       EHGSVRN   GG D+      DDDDWEGVESTE DE
Subjt:  VVKLISVVVSFKEDNLSTSRTTAISIQESAGGASGIKVIESDLAVFGSGSVDFGLAH-------EHGSVRNGGIGGRDS------DDDDWEGVESTEFDE

Query:  LYSAATAFVAASA
        L+SAATAFVAASA
Subjt:  LYSAATAFVAASA

SwissProt top hitse value%identityAlignment
A3AYR1 Acyl-CoA-binding domain-containing protein 43.2e-0847.06Show/hide
Query:  VVKLISVVVSFKEDNLSTSRTTAISIQESAGGASGIKVIESDLAVFGSGSVDFGLAHEHGSVRNGGIGGRDSDDDDWEGVESTEFDELYSAATAFVAASA
        V KLIS V++FKEDNL  +R+T  S   +   A+               S+D G    HG   +G   G DS D DWEGVESTE DE +SAA+AFVAASA
Subjt:  VVKLISVVVSFKEDNLSTSRTTAISIQESAGGASGIKVIESDLAVFGSGSVDFGLAHEHGSVRNGGIGGRDSDDDDWEGVESTEFDELYSAATAFVAASA

Query:  FS
         S
Subjt:  FS

Q9SM23 Acyl-CoA-binding domain-containing protein 17.6e-1045.54Show/hide
Query:  VVKLISVVVSFKEDNLSTSRTTAISIQESAGGASGIKVIESDLAVFGSGSVDFGLAHEHGSVRNGGIGGRD-SDDDDWEGVESTEFDELYSAATAFVAAS
        + KLIS++++FK++NLS +R        +      ++ +E+   +  SG  D  L  E GS+R    G  D SDDDDWEGVESTE DE +SAATAFVAA+
Subjt:  VVKLISVVVSFKEDNLSTSRTTAISIQESAGGASGIKVIESDLAVFGSGSVDFGLAHEHGSVRNGGIGGRD-SDDDDWEGVESTEFDELYSAATAFVAAS

Query:  A
        A
Subjt:  A

Q9STP8 Acyl-CoA-binding domain-containing protein 21.1e-1148.51Show/hide
Query:  VVKLISVVVSFKEDNLSTSRTTAISIQESAGGASGIKVIESDLAVFGSGSVDFGLAHEHGSVRNGGIGGRDS-DDDDWEGVESTEFDELYSAATAFVAAS
        + KLIS+VV+FKEDNLS +R    S  E        + ++S    FG G  D  L  E GS R+  + G DS +DDDWEGVESTE DE +SAAT FV  +
Subjt:  VVKLISVVVSFKEDNLSTSRTTAISIQESAGGASGIKVIESDLAVFGSGSVDFGLAHEHGSVRNGGIGGRDS-DDDDWEGVESTEFDELYSAATAFVAAS

Query:  A
        A
Subjt:  A

Arabidopsis top hitse value%identityAlignment
AT4G27780.1 acyl-CoA binding protein 27.5e-1348.51Show/hide
Query:  VVKLISVVVSFKEDNLSTSRTTAISIQESAGGASGIKVIESDLAVFGSGSVDFGLAHEHGSVRNGGIGGRDS-DDDDWEGVESTEFDELYSAATAFVAAS
        + KLIS+VV+FKEDNLS +R    S  E        + ++S    FG G  D  L  E GS R+  + G DS +DDDWEGVESTE DE +SAAT FV  +
Subjt:  VVKLISVVVSFKEDNLSTSRTTAISIQESAGGASGIKVIESDLAVFGSGSVDFGLAHEHGSVRNGGIGGRDS-DDDDWEGVESTEFDELYSAATAFVAAS

Query:  A
        A
Subjt:  A

AT5G53470.1 acyl-CoA binding protein 15.4e-1145.54Show/hide
Query:  VVKLISVVVSFKEDNLSTSRTTAISIQESAGGASGIKVIESDLAVFGSGSVDFGLAHEHGSVRNGGIGGRD-SDDDDWEGVESTEFDELYSAATAFVAAS
        + KLIS++++FK++NLS +R        +      ++ +E+   +  SG  D  L  E GS+R    G  D SDDDDWEGVESTE DE +SAATAFVAA+
Subjt:  VVKLISVVVSFKEDNLSTSRTTAISIQESAGGASGIKVIESDLAVFGSGSVDFGLAHEHGSVRNGGIGGRD-SDDDDWEGVESTEFDELYSAATAFVAAS

Query:  A
        A
Subjt:  A


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCCATGCTAATGATGTTTCGACGAGCAAGATCATGACACGTATTCATTTACTACTTCTTGTTTCAATCGCCTCGCCATGGCGGAATGGCAGAGCTTCTCCAAACCG
CCATGGCGGAGTTGTCAAGTTGATCTCTGTAGTTGTCTCTTTTAAAGAAGACAACCTCTCTACCTCTCGTACTACCGCTATTTCCATTCAGGAATCCGCCGGAGGAGCTT
CCGGCATCAAGGTAATCGAAAGCGACCTGGCTGTTTTCGGGTCGGGTTCGGTAGATTTCGGATTGGCGCACGAACATGGTAGTGTGAGGAATGGCGGTATTGGTGGGAGG
GATTCCGATGATGATGATTGGGAAGGGGTGGAGAGCACCGAATTCGATGAGCTCTACAGCGCCGCAACTGCATTTGTGGCTGCATCTGCTTTCTCCCAAGGTCTCCAATG
A
mRNA sequenceShow/hide mRNA sequence
ATGTGCCATGCTAATGATGTTTCGACGAGCAAGATCATGACACGTATTCATTTACTACTTCTTGTTTCAATCGCCTCGCCATGGCGGAATGGCAGAGCTTCTCCAAACCG
CCATGGCGGAGTTGTCAAGTTGATCTCTGTAGTTGTCTCTTTTAAAGAAGACAACCTCTCTACCTCTCGTACTACCGCTATTTCCATTCAGGAATCCGCCGGAGGAGCTT
CCGGCATCAAGGTAATCGAAAGCGACCTGGCTGTTTTCGGGTCGGGTTCGGTAGATTTCGGATTGGCGCACGAACATGGTAGTGTGAGGAATGGCGGTATTGGTGGGAGG
GATTCCGATGATGATGATTGGGAAGGGGTGGAGAGCACCGAATTCGATGAGCTCTACAGCGCCGCAACTGCATTTGTGGCTGCATCTGCTTTCTCCCAAGGTCTCCAATG
A
Protein sequenceShow/hide protein sequence
MCHANDVSTSKIMTRIHLLLLVSIASPWRNGRASPNRHGGVVKLISVVVSFKEDNLSTSRTTAISIQESAGGASGIKVIESDLAVFGSGSVDFGLAHEHGSVRNGGIGGR
DSDDDDWEGVESTEFDELYSAATAFVAASAFSQGLQ