; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh02G011630 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G011630
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptiondof zinc finger protein 1-like
Genome locationCmo_Chr02:7022547..7023336
RNA-Seq ExpressionCmoCh02G011630
SyntenyCmoCh02G011630
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR003851 - Zinc finger, Dof-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605798.1 Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia]5.5e-7290.97Show/hide
Query:  MDMPYSPQNSAGGGGGGGSSSSSSKGNHALERKVRPEKERALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRSSFS
        MD+ +  Q      GGGGSSSSSSKGNHALERKVRPEKE+ALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRSSFS
Subjt:  MDMPYSPQNSAGGGGGGGSSSSSSKGNHALERKVRPEKERALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRSSFS

Query:  SSSADDDRKIDTHHPIPASSTTSPHLFGSFMAANGGGGDDQTAVMFPAEKVELNR
        SSSADDDRKIDTHHPIPASSTTSPHLFGSFMAANGGG DDQTAV+FPAEKVELNR
Subjt:  SSSADDDRKIDTHHPIPASSTTSPHLFGSFMAANGGGGDDQTAVMFPAEKVELNR

KAG7035762.1 Dof zinc finger protein DOF4.6, partial [Cucurbita argyrosperma subsp. argyrosperma]7.9e-7996.2Show/hide
Query:  MDMPYSPQNSA---GGGGGGGSSSSSSKGNHALERKVRPEKERALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRS
        MDMPYSPQNSA   GGGGGGGSSSSSSKGNHALERKVRPEKE+ALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRS
Subjt:  MDMPYSPQNSA---GGGGGGGSSSSSSKGNHALERKVRPEKERALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRS

Query:  SFSSSSADDDRKIDTHHPIPASSTTSPHLFGSFMAANGGGGDDQTAVMFPAEKVELNR
        SFSSSSADDDRKIDTHHPIPASSTTSPHLFGSFMAANGGG DDQTAV+FPAEKVELNR
Subjt:  SFSSSSADDDRKIDTHHPIPASSTTSPHLFGSFMAANGGGGDDQTAVMFPAEKVELNR

XP_004145942.2 dof zinc finger protein DOF2.5 [Cucumis sativus]6.7e-3849.53Show/hide
Query:  GGGGGGGSSSSSSK--------GNHALERKVRPEKERALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRSSF--SS
        GGGGGGGSSSS SK        GN+ LE+KVR EKE+AL+CPRCNS+NTKFCYYNNYSLSQPRYFCKACR+YWT+G SLRNVPVGGGSRKN+RSS   SS
Subjt:  GGGGGGGSSSSSSK--------GNHALERKVRPEKERALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRSSF--SS

Query:  SSADDDRKIDTHH----------------------PIPASSTTSPHLFGSFMAA------NGGGG-----------------------------------
        SS+D ++KI+  H                       I  SS++S HL  SFM A      NG GG                                   
Subjt:  SSADDDRKIDTHH----------------------PIPASSTTSPHLFGSFMAA------NGGGG-----------------------------------

Query:  DDQTAVMFPAEKVE
         DQTAVMFP E ++
Subjt:  DDQTAVMFPAEKVE

XP_022958525.1 dof zinc finger protein 1-like [Cucurbita moschata]4.5e-82100Show/hide
Query:  MDMPYSPQNSAGGGGGGGSSSSSSKGNHALERKVRPEKERALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRSSFS
        MDMPYSPQNSAGGGGGGGSSSSSSKGNHALERKVRPEKERALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRSSFS
Subjt:  MDMPYSPQNSAGGGGGGGSSSSSSKGNHALERKVRPEKERALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRSSFS

Query:  SSSADDDRKIDTHHPIPASSTTSPHLFGSFMAANGGGGDDQTAVMFPAEKVELNR
        SSSADDDRKIDTHHPIPASSTTSPHLFGSFMAANGGGGDDQTAVMFPAEKVELNR
Subjt:  SSSADDDRKIDTHHPIPASSTTSPHLFGSFMAANGGGGDDQTAVMFPAEKVELNR

XP_022996208.1 dof zinc finger protein 1-like [Cucurbita maxima]8.8e-6287.25Show/hide
Query:  QNSAGGGGGGGSSSSSSKGNHALERKVRPEKERALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRSSF---SSSSA
        QN+A  GGGGGSSSSSSKGNH LERKVRP+KE+AL CPRCNSANTKFCYYNNYSLSQPRYFCKACRKYWT GSSLRNVPVGGGSRKNRRSSF   SSSSA
Subjt:  QNSAGGGGGGGSSSSSSKGNHALERKVRPEKERALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRSSF---SSSSA

Query:  DDDRKIDTHHPIPASSTTSPHLFGSFMAAN---GGGGDDQTAVMFPAEK
        DDDR IDTHHPIPASSTT+ HLF SFMAAN   GGGGDDQTAVMFPAE+
Subjt:  DDDRKIDTHHPIPASSTTSPHLFGSFMAAN---GGGGDDQTAVMFPAEK

TrEMBL top hitse value%identityAlignment
A0A0A0KJS3 Dof-type domain-containing protein3.3e-3849.53Show/hide
Query:  GGGGGGGSSSSSSK--------GNHALERKVRPEKERALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRSSF--SS
        GGGGGGGSSSS SK        GN+ LE+KVR EKE+AL+CPRCNS+NTKFCYYNNYSLSQPRYFCKACR+YWT+G SLRNVPVGGGSRKN+RSS   SS
Subjt:  GGGGGGGSSSSSSK--------GNHALERKVRPEKERALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRSSF--SS

Query:  SSADDDRKIDTHH----------------------PIPASSTTSPHLFGSFMAA------NGGGG-----------------------------------
        SS+D ++KI+  H                       I  SS++S HL  SFM A      NG GG                                   
Subjt:  SSADDDRKIDTHH----------------------PIPASSTTSPHLFGSFMAA------NGGGG-----------------------------------

Query:  DDQTAVMFPAEKVE
         DQTAVMFP E ++
Subjt:  DDQTAVMFPAEKVE

A0A1S3AV39 dof zinc finger protein DOF4.6-like4.7e-3755.68Show/hide
Query:  MDMPYSPQNSAGGG-------GGGGSSSSSSK-------GNHALERKVRPEKERALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRKYWTDGSSLRNVP
        MD  + PQ + GGG       GGGGSSSS SK       GN+ LERKVR EKE+AL+CPRCNS+NTKFCYYNNYSLSQPRYFCKACR+YWT+G SLRNVP
Subjt:  MDMPYSPQNSAGGG-------GGGGSSSSSSK-------GNHALERKVRPEKERALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRKYWTDGSSLRNVP

Query:  VGGGSRKNRRSSFSSS--SADDDRKIDTHHPI-----------------------PASSTTSPHLFGSFMAANGGG
        VGGGSRKN+RSS SSS  S+D ++KI+  H I                        ++S++S HL  SFM A   G
Subjt:  VGGGSRKNRRSSFSSS--SADDDRKIDTHHPI-----------------------PASSTTSPHLFGSFMAANGGG

A0A5D3C6H0 Dof zinc finger protein DOF4.6-like8.9e-3658.71Show/hide
Query:  GGGGSSSSSSK-------GNHALERKVRPEKERALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRSSFSSS--SAD
        GGGGSSSS SK       GN+ LERKVR EKE+AL+CPRCNS+NTKFCYYNNYSLSQPRYFCKACR+YWT+G SLRNVPVGGGSRKN+RSS SSS  S+D
Subjt:  GGGGSSSSSSK-------GNHALERKVRPEKERALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRSSFSSS--SAD

Query:  DDRKIDTHHPI-----------------------PASSTTSPHLFGSFMAANGGG
         ++KI+  H I                        ++S++S HL  SFM A   G
Subjt:  DDRKIDTHHPI-----------------------PASSTTSPHLFGSFMAANGGG

A0A6J1H3S0 dof zinc finger protein 1-like2.2e-82100Show/hide
Query:  MDMPYSPQNSAGGGGGGGSSSSSSKGNHALERKVRPEKERALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRSSFS
        MDMPYSPQNSAGGGGGGGSSSSSSKGNHALERKVRPEKERALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRSSFS
Subjt:  MDMPYSPQNSAGGGGGGGSSSSSSKGNHALERKVRPEKERALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRSSFS

Query:  SSSADDDRKIDTHHPIPASSTTSPHLFGSFMAANGGGGDDQTAVMFPAEKVELNR
        SSSADDDRKIDTHHPIPASSTTSPHLFGSFMAANGGGGDDQTAVMFPAEKVELNR
Subjt:  SSSADDDRKIDTHHPIPASSTTSPHLFGSFMAANGGGGDDQTAVMFPAEKVELNR

A0A6J1KA74 dof zinc finger protein 1-like4.2e-6287.25Show/hide
Query:  QNSAGGGGGGGSSSSSSKGNHALERKVRPEKERALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRSSF---SSSSA
        QN+A  GGGGGSSSSSSKGNH LERKVRP+KE+AL CPRCNSANTKFCYYNNYSLSQPRYFCKACRKYWT GSSLRNVPVGGGSRKNRRSSF   SSSSA
Subjt:  QNSAGGGGGGGSSSSSSKGNHALERKVRPEKERALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRSSF---SSSSA

Query:  DDDRKIDTHHPIPASSTTSPHLFGSFMAAN---GGGGDDQTAVMFPAEK
        DDDR IDTHHPIPASSTT+ HLF SFMAAN   GGGGDDQTAVMFPAE+
Subjt:  DDDRKIDTHHPIPASSTTSPHLFGSFMAAN---GGGGDDQTAVMFPAEK

SwissProt top hitse value%identityAlignment
B9F1L8 Dof zinc finger protein 23.5e-2964.95Show/hide
Query:  PYSPQNSAGGGGGGGSSSSSSKGNHALERKVRPEKERALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRSSFS
        P +P  +AG   G G++ + +      ER+ RP+KE+AL CPRCNS NTKFCYYNNYSL QPRYFCK CR+YWT+G SLRNVPVGGGSRKN+RSS S
Subjt:  PYSPQNSAGGGGGGGSSSSSSKGNHALERKVRPEKERALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRSSFS

O24463 Dof zinc finger protein PBF1.2e-2647.86Show/hide
Query:  ERKVRPEKERALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRSS--------FSSSSA------------DDDRKI
        ERK RP+   AL+CPRC+S NTKFCYYNNYS+SQPRYFCKACR+YWT G +LRNVP+GGG RKN+ +S         SSSSA              +  I
Subjt:  ERKVRPEKERALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRSS--------FSSSSA------------DDDRKI

Query:  DTH--------HPIPASSTTSPHLFGSFMAANGGGGDDQT
        + H         P P +    P++  + M   GGGG D T
Subjt:  DTH--------HPIPASSTTSPHLFGSFMAANGGGGDDQT

Q84JQ8 Dof zinc finger protein DOF1.88.3e-3163.37Show/hide
Query:  LERKVRPEKERALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRSSFSSSSADDDRKIDTHHPIPASSTTS----PH
        +ERK RPEK++AL CPRCNS NTKFCYYNNYSL+QPRYFCK CR+YWT G SLRN+PVGGG RKN+RSS +SSS+       +  P+ A++ T     PH
Subjt:  LERKVRPEKERALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRSSFSSSSADDDRKIDTHHPIPASSTTS----PH

Query:  L
        L
Subjt:  L

Q8LAP8 Dof zinc finger protein DOF4.63.2e-3064.58Show/hide
Query:  ERKVRPEKERALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRSSFSSSSADDDRKIDTHHPIPASSTTSPHL
        ERK RPEK++A+ CPRCNS NTKFCYYNNYSL+QPRYFCK CR+YWT+G SLRN+PVGGGSRKN+RS  SSS       I  +H       T  HL
Subjt:  ERKVRPEKERALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRSSFSSSSADDDRKIDTHHPIPASSTTSPHL

Q9SXG8 Dof zinc finger protein 13.0e-3358.02Show/hide
Query:  GGGGGGGSSSSSSKGNHALERKVRPEKERALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRSSFSSSSADDDRKID
        GGGGGG    +   G  + ER+ RP+KE+AL CPRCNS NTKFCYYNNYSL QPRYFCK CR+YWT+G SLRNVPVGGGSRKN+RSS S++SA       
Subjt:  GGGGGGGSSSSSSKGNHALERKVRPEKERALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRSSFSSSSADDDRKID

Query:  THHPIPASSTTSPHLFGS-----FMAANGGG
             PAS++T+  +  S      MA+ GGG
Subjt:  THHPIPASSTTSPHLFGS-----FMAANGGG

Arabidopsis top hitse value%identityAlignment
AT1G64620.1 Dof-type zinc finger DNA-binding family protein5.9e-3263.37Show/hide
Query:  LERKVRPEKERALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRSSFSSSSADDDRKIDTHHPIPASSTTS----PH
        +ERK RPEK++AL CPRCNS NTKFCYYNNYSL+QPRYFCK CR+YWT G SLRN+PVGGG RKN+RSS +SSS+       +  P+ A++ T     PH
Subjt:  LERKVRPEKERALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRSSFSSSSADDDRKIDTHHPIPASSTTS----PH

Query:  L
        L
Subjt:  L

AT2G46590.1 Dof-type zinc finger DNA-binding family protein1.2e-2764.89Show/hide
Query:  SAGGGGGGGSSSSSSKGNHALERKVRPEKERALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRSSFSSSS
        S  G    G S++++      ERK RP+++  L CPRCNS NTKFCYYNNYSL+QPRYFCK CR+YWT+G SLRNVPVGG SRKN+RSS SSSS
Subjt:  SAGGGGGGGSSSSSSKGNHALERKVRPEKERALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRSSFSSSS

AT2G46590.2 Dof-type zinc finger DNA-binding family protein1.2e-2764.89Show/hide
Query:  SAGGGGGGGSSSSSSKGNHALERKVRPEKERALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRSSFSSSS
        S  G    G S++++      ERK RP+++  L CPRCNS NTKFCYYNNYSL+QPRYFCK CR+YWT+G SLRNVPVGG SRKN+RSS SSSS
Subjt:  SAGGGGGGGSSSSSSKGNHALERKVRPEKERALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRSSFSSSS

AT3G61850.1 Dof-type zinc finger DNA-binding family protein2.0e-2755.26Show/hide
Query:  PQNSAGGGGGGGSSSSSSKGNHALERKVRPEKERALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRSSFSSSSADD
        P  +A  GG GG++++++       RK RP+++  + CPRCNS NTKFCYYNNYSL+QPRYFCK CR+YWT+G SLRNVPVGG SRKN+RSS   +S  +
Subjt:  PQNSAGGGGGGGSSSSSSKGNHALERKVRPEKERALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRSSFSSSSADD

Query:  DRKIDTHHPIPASS
         +  D + PI  SS
Subjt:  DRKIDTHHPIPASS

AT4G24060.1 Dof-type zinc finger DNA-binding family protein2.2e-3164.58Show/hide
Query:  ERKVRPEKERALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRSSFSSSSADDDRKIDTHHPIPASSTTSPHL
        ERK RPEK++A+ CPRCNS NTKFCYYNNYSL+QPRYFCK CR+YWT+G SLRN+PVGGGSRKN+RS  SSS       I  +H       T  HL
Subjt:  ERKVRPEKERALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRSSFSSSSADDDRKIDTHHPIPASSTTSPHL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACATGCCTTATTCGCCACAGAATTCAGCTGGAGGAGGAGGAGGAGGAGGATCTTCATCAAGTTCTTCAAAGGGTAATCATGCATTAGAGAGAAAAGTAAGGCCAGA
AAAGGAACGAGCTTTGAGGTGTCCGAGGTGCAATTCAGCCAACACCAAGTTCTGTTATTACAACAATTACAGTTTGTCTCAGCCCAGGTATTTTTGCAAAGCTTGTCGGA
AGTATTGGACTGACGGCAGCTCTTTAAGGAATGTTCCTGTCGGCGGTGGCTCAAGGAAGAACAGAAGGTCTTCATTTTCATCATCATCAGCTGATGATGATAGAAAGATT
GACACCCACCACCCTATTCCGGCTTCTTCAACTACTTCTCCTCATCTTTTTGGTTCTTTCATGGCGGCCAACGGCGGCGGCGGCGATGACCAGACGGCTGTTATGTTTCC
AGCTGAAAAAGTTGAGTTAAATCGATGA
mRNA sequenceShow/hide mRNA sequence
TTTCCATGGACATGCCTTATTCGCCACAGAATTCAGCTGGAGGAGGAGGAGGAGGAGGATCTTCATCAAGTTCTTCAAAGGGTAATCATGCATTAGAGAGAAAAGTAAGG
CCAGAAAAGGAACGAGCTTTGAGGTGTCCGAGGTGCAATTCAGCCAACACCAAGTTCTGTTATTACAACAATTACAGTTTGTCTCAGCCCAGGTATTTTTGCAAAGCTTG
TCGGAAGTATTGGACTGACGGCAGCTCTTTAAGGAATGTTCCTGTCGGCGGTGGCTCAAGGAAGAACAGAAGGTCTTCATTTTCATCATCATCAGCTGATGATGATAGAA
AGATTGACACCCACCACCCTATTCCGGCTTCTTCAACTACTTCTCCTCATCTTTTTGGTTCTTTCATGGCGGCCAACGGCGGCGGCGGCGATGACCAGACGGCTGTTATG
TTTCCAGCTGAAAAAGTTGAGTTAAATCGATGA
Protein sequenceShow/hide protein sequence
MDMPYSPQNSAGGGGGGGSSSSSSKGNHALERKVRPEKERALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRSSFSSSSADDDRKI
DTHHPIPASSTTSPHLFGSFMAANGGGGDDQTAVMFPAEKVELNR