CuGenDBv2

Gene ID	CmoCh02G012210
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Non-structural maintenance of chromosomes element 1 homolog
Genome location	Cmo_Chr02:7347116..7351760
RNA-Seq Expression	CmoCh02G012210
Synteny	CmoCh02G012210
Gene Ontology terms	GO:0006281 - DNA repair (biological process) GO:0006310 - DNA recombination (biological process) GO:0005634 - nucleus (cellular component) GO:0030915 - Smc5-Smc6 complex (cellular component) GO:0016740 - transferase activity (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR011513 - Non-structural maintenance of chromosomes element 1 IPR013083 - Zinc finger, RING/FYVE/PHD-type IPR014857 - Zinc finger, RING-like IPR036388 - Winged helix-like DNA-binding domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7035803.1 Non-structural maintenance of chromosomes element 1-like protein [Cucurbita argyrosperma subsp. argyrosperma]

4.4e-178

99.04

Show/hide

Query:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPENDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSP+NDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPENDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSARGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
        YKAIVEAIAQDPSA+GGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
Subjt:  YKAIVEAIAQDPSARGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC

Query:  NEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP
        NEAGVKAELCSNEGCTVRVH YCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP
Subjt:  NEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP

Query:  PDTRRITRSSAHPR
        PDTRRITRSSAHPR
Subjt:  PDTRRITRSSAHPR

XP_022957637.1 non-structural maintenance of chromosomes element 1 homolog [Cucurbita moschata]

1.0e-179

100

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Query:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPENDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPENDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPENDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSARGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
        YKAIVEAIAQDPSARGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
Subjt:  YKAIVEAIAQDPSARGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC

Query:  NEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP
        NEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP
Subjt:  NEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP

Query:  PDTRRITRSSAHPR
        PDTRRITRSSAHPR
Subjt:  PDTRRITRSSAHPR

XP_022995422.1 non-structural maintenance of chromosomes element 1 homolog isoform X1 [Cucurbita maxima]

1.7e-177

98.73

Show/hide

Query:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPENDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSP+NDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPENDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSARGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
        YKAIVEAIAQDPSA+GGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
Subjt:  YKAIVEAIAQDPSARGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC

Query:  NEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP
        NEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDS+AAAQASQPP
Subjt:  NEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP

Query:  PDTRRITRSSAHPR
        PDTRRITRSSAH R
Subjt:  PDTRRITRSSAHPR

XP_022995424.1 non-structural maintenance of chromosomes element 1 homolog isoform X2 [Cucurbita maxima]

1.7e-177

98.73

Show/hide

Query:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPENDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSP+NDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPENDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSARGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
        YKAIVEAIAQDPSA+GGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
Subjt:  YKAIVEAIAQDPSARGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC

Query:  NEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP
        NEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDS+AAAQASQPP
Subjt:  NEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP

Query:  PDTRRITRSSAHPR
        PDTRRITRSSAH R
Subjt:  PDTRRITRSSAHPR

XP_023533198.1 non-structural maintenance of chromosomes element 1 homolog [Cucurbita pepo subsp. pepo]

3.7e-177

98.41

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Query:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPENDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSP+NDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPENDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSARGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
        YKAIVEAIAQDPSA+GGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
Subjt:  YKAIVEAIAQDPSARGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC

Query:  NEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP
        NEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDS+AAAQASQPP
Subjt:  NEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP

Query:  PDTRRITRSSAHPR
        PDTRRITRS+AH R
Subjt:  PDTRRITRSSAHPR

TrEMBL top hits

e value

%identity

Alignment

A0A6J1DI86 Non-structural maintenance of chromosomes element 1 homolog

5.6e-155

87.94

Show/hide

Query:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPENDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLRED FHL+FTRIT KSP+ND+QLFNNYLL +NKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPENDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSARGGISNIAALHLQLENQLGDAGSQ-SHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
        YKAIVEAIAQDPSA+GGISNIAALHLQLENQLGD GSQ S VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
Subjt:  YKAIVEAIAQDPSARGGISNIAALHLQLENQLGDAGSQ-SHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV

Query:  CNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQP
        CNEAGVKAELC NEGCTVRVH+YCLKKMLSNKKSKRACP CGT+WRST  N+E KEEEDEPD R QGQSSS +RKK+RLN D+DS  NG     A ASQP
Subjt:  CNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQP

Query:  PPDTRRITRSSAHPR
        PP+TRR+TRSSA  R
Subjt:  PPDTRRITRSSAHPR

A0A6J1DJY3 Non-structural maintenance of chromosomes element 1 homolog

5.6e-155

87.94

Show/hide

Query:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPENDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLRED FHL+FTRIT KSP+ND+QLFNNYLL +NKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPENDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSARGGISNIAALHLQLENQLGDAGSQ-SHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
        YKAIVEAIAQDPSA+GGISNIAALHLQLENQLGD GSQ S VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
Subjt:  YKAIVEAIAQDPSARGGISNIAALHLQLENQLGDAGSQ-SHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV

Query:  CNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQP
        CNEAGVKAELC NEGCTVRVH+YCLKKMLSNKKSKRACP CGT+WRST  N+E KEEEDEPD R QGQSSS +RKK+RLN D+DS  NG     A ASQP
Subjt:  CNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQP

Query:  PPDTRRITRSSAHPR
        PP+TRR+TRSSA  R
Subjt:  PPDTRRITRSSAHPR

A0A6J1GZN9 Non-structural maintenance of chromosomes element 1 homolog

5.0e-180

100

Show/hide

Query:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPENDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPENDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPENDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSARGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
        YKAIVEAIAQDPSARGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
Subjt:  YKAIVEAIAQDPSARGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC

Query:  NEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP
        NEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP
Subjt:  NEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP

Query:  PDTRRITRSSAHPR
        PDTRRITRSSAHPR
Subjt:  PDTRRITRSSAHPR

A0A6J1JYV1 Non-structural maintenance of chromosomes element 1 homolog

8.0e-178

98.73

Show/hide

Query:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPENDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSP+NDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPENDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSARGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
        YKAIVEAIAQDPSA+GGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
Subjt:  YKAIVEAIAQDPSARGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC

Query:  NEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP
        NEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDS+AAAQASQPP
Subjt:  NEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP

Query:  PDTRRITRSSAHPR
        PDTRRITRSSAH R
Subjt:  PDTRRITRSSAHPR

A0A6J1K5P2 Non-structural maintenance of chromosomes element 1 homolog

8.0e-178

98.73

Show/hide

Query:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPENDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSP+NDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPENDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSARGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
        YKAIVEAIAQDPSA+GGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
Subjt:  YKAIVEAIAQDPSARGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC

Query:  NEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP
        NEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDS+AAAQASQPP
Subjt:  NEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP

Query:  PDTRRITRSSAHPR
        PDTRRITRSSAH R
Subjt:  PDTRRITRSSAHPR

SwissProt top hits

e value

%identity

Alignment

Q6P881 Non-structural maintenance of chromosomes element 1 homolog

4.5e-08

21.15

Show/hide

Query:  ELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPEN-DRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFY
        +++  H   +Q L++ G +       L     E    N      ++++  +NK L     ++     + DG  YY LVN V ++ +K+ + Y+  ++  +
Subjt:  ELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPEN-DRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFY

Query:  KAIVEAIAQDPSARGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAEL----AQDQWLNCTPDGFVNLGVRSFLDLRSWFRT--NDIP
        +  +E I    S  G    I+ L+L  E Q                  S  +K+K + +L     QD+WL    +G   L  R  ++L  +      D+ 
Subjt:  KAIVEAIAQDPSARGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAEL----AQDQWLNCTPDGFVNLGVRSFLDLRSWFRT--NDIP

Query:  S-CEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKR
          C VC++  ++ +LC N  C + +H  C   +     +   CP+C   W    P++          +++  Q  SH +
Subjt:  S-CEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKR

Q6PAF4 Non-structural maintenance of chromosomes element 1 homolog

1.6e-10

21.99

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Query:  HHTLIQALLARGPLREDHFHLLFTRITE-KSPENDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVE
        H   +QAL++ G +       L     E           ++++  +N+ L      +     + DG  YY LVN V ++ +K+ + Y+  ++  ++  +E
Subjt:  HHTLIQALLARGPLREDHFHLLFTRITE-KSPENDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVE

Query:  AIAQDPSARGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAEL----AQDQWLNCTPDGFVNLGVRSFLDLRSWFRT--NDIPS-CEV
         I    S  G  ++I+ L+L  E Q                  S  +K+K + +L     Q++WL    +G   L  R  ++L  + R    D+   C V
Subjt:  AIAQDPSARGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAEL----AQDQWLNCTPDGFVNLGVRSFLDLRSWFRT--NDIPS-CEV

Query:  CNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRD
        C +  ++++LC N  C + +H  C  K   + K+   CP+C   W    P++           ++  Q  SH + +T   R+
Subjt:  CNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRD

Arabidopsis top hits

e value

%identity

Alignment

AT5G21140.1 embryo defective 1379

3.2e-94

55.06

Show/hide

Query:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPENDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        M  LSW+HHTLIQAL++RGPL+E  FH +FT +T ++P   +++F+ YLL +NK LS+  FEL+ CR+QYDG+V YG+VNNV+D+QSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPENDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSARGGISNIAALHLQLENQL-GDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
        +K I+EAIAQD +A+G IS+  AL+++LENQ+  +A S    +PPAFKNFS++ KEKT+ EL +D+WL  T +  + LG+RS LDLRSWFR ND+PSCEV
Subjt:  YKAIVEAIAQDPSARGGISNIAALHLQLENQL-GDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV

Query:  CNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQW-RSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQ
        CNEAGVKA+LC  EGC VR+H+YCLKK+LS +  KR C  CG  W  S     E  EE    +   + Q+++ K K+ R  R  DS  NG S A+  AS 
Subjt:  CNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQW-RSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQ

Query:  PPPDTRRITRSSAHPR
           +TRR+TRS  H R
Subjt:  PPPDTRRITRSSAHPR

Sequences

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CDS sequence

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ATGCGGGAGCTGAGTTGGAGACATCACACTCTCATTCAAGCGCTTCTCGCTCGCGGCCCACTCAGAGAGGATCACTTCCATTTGCTGTTTACGCGGATCACTGAAAAGAG
TCCAGAGAATGACCGGCAGCTTTTTAATAATTACCTCCTGACGATGAACAAAGCACTTTCTTTTGCTCAATTTGAGTTGCGAGGCTGCAGAAACCAATATGATGGTCGTG
TTTACTATGGCTTGGTCAATAATGTATCCGATGAACAATCCAAACTGGGAACAAAGTATTCAGTTCCACAGATTGCCTTTTATAAAGCCATTGTTGAAGCAATTGCACAA
GATCCATCTGCTCGAGGTGGAATATCCAACATTGCTGCTCTTCATCTGCAGTTGGAAAATCAGCTGGGGGATGCAGGGTCCCAGTCCCATGTCATACCACCTGCTTTCAA
GAATTTCTCAATATCTCTCAAGGAAAAAACAATCGCCGAGCTTGCTCAGGATCAGTGGCTTAATTGCACCCCTGATGGTTTTGTAAATTTGGGTGTCAGATCATTTCTTG
ATTTGCGAAGTTGGTTCCGCACTAATGACATACCTTCATGTGAAGTGTGCAATGAAGCTGGAGTGAAGGCAGAGTTGTGTAGTAATGAAGGCTGCACTGTTCGTGTACAT
CGGTATTGCCTTAAGAAAATGTTATCCAATAAAAAGAGTAAAAGGGCTTGCCCAAGTTGTGGCACTCAATGGCGATCTACAGCACCCAATGTGGAGTTCAAGGAGGAAGA
GGATGAGCCAGATGCGCGCATTCAAGGCCAGTCATCATCACATAAGAGGAAGAAAACCAGATTGAACAGAGATATTGATTCAGGACCAAATGGAGACAGTATGGCTGCGG
CACAAGCTTCCCAACCTCCTCCAGATACAAGGAGAATAACACGAAGTTCTGCACACCCGCGTTTCATGGATCCTAGTCTAGGAGTTGTGAAGTGTGCAGCAACTGCACCT
TTTGATAATTGGAATGTAAAGTGCATTACACAGCGTAAGCCAAAGTATGAGTAA

mRNA sequence

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GTAAAAGCGGCTATCCAGCGCTAGACGACTTCACTTCCTGGAGGTCTTTCAAAATTTTCCCGCACAAATTCTTCTCTTCTATGAGTTTGGCTGAAACTCCCTTACAGAAT
CAACCTTGTCTGAATCTTTGAGGTATTAGCTGACCTTGAATTAGGGTTCAGAATGCGGGAGCTGAGTTGGAGACATCACACTCTCATTCAAGCGCTTCTCGCTCGCGGCC
CACTCAGAGAGGATCACTTCCATTTGCTGTTTACGCGGATCACTGAAAAGAGTCCAGAGAATGACCGGCAGCTTTTTAATAATTACCTCCTGACGATGAACAAAGCACTT
TCTTTTGCTCAATTTGAGTTGCGAGGCTGCAGAAACCAATATGATGGTCGTGTTTACTATGGCTTGGTCAATAATGTATCCGATGAACAATCCAAACTGGGAACAAAGTA
TTCAGTTCCACAGATTGCCTTTTATAAAGCCATTGTTGAAGCAATTGCACAAGATCCATCTGCTCGAGGTGGAATATCCAACATTGCTGCTCTTCATCTGCAGTTGGAAA
ATCAGCTGGGGGATGCAGGGTCCCAGTCCCATGTCATACCACCTGCTTTCAAGAATTTCTCAATATCTCTCAAGGAAAAAACAATCGCCGAGCTTGCTCAGGATCAGTGG
CTTAATTGCACCCCTGATGGTTTTGTAAATTTGGGTGTCAGATCATTTCTTGATTTGCGAAGTTGGTTCCGCACTAATGACATACCTTCATGTGAAGTGTGCAATGAAGC
TGGAGTGAAGGCAGAGTTGTGTAGTAATGAAGGCTGCACTGTTCGTGTACATCGGTATTGCCTTAAGAAAATGTTATCCAATAAAAAGAGTAAAAGGGCTTGCCCAAGTT
GTGGCACTCAATGGCGATCTACAGCACCCAATGTGGAGTTCAAGGAGGAAGAGGATGAGCCAGATGCGCGCATTCAAGGCCAGTCATCATCACATAAGAGGAAGAAAACC
AGATTGAACAGAGATATTGATTCAGGACCAAATGGAGACAGTATGGCTGCGGCACAAGCTTCCCAACCTCCTCCAGATACAAGGAGAATAACACGAAGTTCTGCACACCC
GCGTTTCATGGATCCTAGTCTAGGAGTTGTGAAGTGTGCAGCAACTGCACCTTTTGATAATTGGAATGTAAAGTGCATTACACAGCGTAAGCCAAAGTATGAGTAA

Protein sequence

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MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPENDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQ
DPSARGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVH
RYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPPPDTRRITRSSAHPRFMDPSLGVVKCAATAP
FDNWNVKCITQRKPKYE

CmoCh02G012210 (gene) of Cucurbita moschata (Rifu) v1 genome