; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh02G012430 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G012430
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionsplicing factor 1-like isoform X2
Genome locationCmo_Chr02:7465999..7472596
RNA-Seq ExpressionCmoCh02G012430
SyntenyCmoCh02G012430
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR004088 - K Homology domain, type 1
IPR032570 - Splicing factor 1, helix-hairpin domain
IPR036612 - K Homology domain, type 1 superfamily
IPR045071 - KH domain-containing BBP-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7035824.1 bpb1 [Cucurbita argyrosperma subsp. argyrosperma]3.3e-10465.9Show/hide
Query:  MSAEVEKTSHIEPGNAKMSGATNSSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPVFRVNKKLGGNESANGENEKQSQRKTKWGPDLTQDSAVRRGRLI
        MSAEVEKTSHIEPGNAKM+GATNSSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPVFRVNKKLGGNESANGEN KQSQRKTKWGPDLTQDSAVRRGRLI
Subjt:  MSAEVEKTSHIEPGNAKMSGATNSSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPVFRVNKKLGGNESANGENEKQSQRKTKWGPDLTQDSAVRRGRLI

Query:  AYQAQLKVNRKCVYFVYFVELLKCHTSLSLCILDKFLLISQGIIWDKILLPSLTIFIQLNIVNLLPLNFPFFLFGAKILLCDCFAWNIPIQVLLSDITAS
        AYQ                                                                                                 
Subjt:  AYQAQLKVNRKCVYFVYFVELLKCHTSLSLCILDKFLLISQGIIWDKILLPSLTIFIQLNIVNLLPLNFPFFLFGAKILLCDCFAWNIPIQVLLSDITAS

Query:  MTRLEQIMELLKSGTLEVPETQDSAIEAENVDDSPGSQATNEVRNNELLEIEKREVIGEILKLNPSYKAPPDYRPLLKADKLLLP---------------
         TRLEQIMELLKSGTLEVPETQDSAIEAENVDDSPGSQATNEVRNNELLEIEKREVIGEILKLNPSYKAPPDYRPLLKADKLLLP               
Subjt:  MTRLEQIMELLKSGTLEVPETQDSAIEAENVDDSPGSQATNEVRNNELLEIEKREVIGEILKLNPSYKAPPDYRPLLKADKLLLP---------------

Query:  --VKEYPDYNFIGLIYGPSGENQKRLEKETGAKIQICGIKPGTGEK
          VKEYPDYNFIGLIYGPSGENQKRLEKETGAKIQICGIK GTGEK
Subjt:  --VKEYPDYNFIGLIYGPSGENQKRLEKETGAKIQICGIKPGTGEK

XP_022958561.1 branchpoint-bridging protein-like isoform X1 [Cucurbita moschata]6.7e-10564.89Show/hide
Query:  MSAEVEKTSHIEPGNAKMSGATNSSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPVFRVNKKLGGNESANGENEKQSQRKTKWGPDLTQDSAVRRGRLI
        MSAEVEKTSHIEPGNAKMSGATNSSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPVFRVNKKLGGNESANGENEKQSQRKTKWGPDLTQDSAVRRGRLI
Subjt:  MSAEVEKTSHIEPGNAKMSGATNSSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPVFRVNKKLGGNESANGENEKQSQRKTKWGPDLTQDSAVRRGRLI

Query:  AYQAQLKVNRKCVYFVYFVELLKCHTSLSLCILDKFLLISQGIIWDKILLPSLTIFIQLNIVNLLPLNFPFFLFGAKILLCDCFAWNIPIQVLLSDITAS
        AYQ                                                                                                 
Subjt:  AYQAQLKVNRKCVYFVYFVELLKCHTSLSLCILDKFLLISQGIIWDKILLPSLTIFIQLNIVNLLPLNFPFFLFGAKILLCDCFAWNIPIQVLLSDITAS

Query:  MTRLEQIMELLKSGTLEVPETQDSAIEAENVDDSPGSQATNE---------------------------VRNNELLEIEKREVIGEILKLNPSYKAPPDY
         TRLEQIMELLKSGTLEVPETQDSAIEAENVDDSPGSQATNE                           VRNNELLEIEKREVIGEILKLNPSYKAPPDY
Subjt:  MTRLEQIMELLKSGTLEVPETQDSAIEAENVDDSPGSQATNE---------------------------VRNNELLEIEKREVIGEILKLNPSYKAPPDY

Query:  RPLLKADKLLLPVKEYPDYNFIGLIYGPSGENQKRLEKETGAKIQICGIKPGTGEK
        RPLLKADKLLLPVKEYPDYNFIGLIYGPSGENQKRLEKETGAKIQICGIKPGTGEK
Subjt:  RPLLKADKLLLPVKEYPDYNFIGLIYGPSGENQKRLEKETGAKIQICGIKPGTGEK

XP_022958562.1 branchpoint-bridging protein-like isoform X2 [Cucurbita moschata]2.6e-10970.21Show/hide
Query:  MSAEVEKTSHIEPGNAKMSGATNSSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPVFRVNKKLGGNESANGENEKQSQRKTKWGPDLTQDSAVRRGRLI
        MSAEVEKTSHIEPGNAKMSGATNSSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPVFRVNKKLGGNESANGENEKQSQRKTKWGPDLTQDSAVRRGRLI
Subjt:  MSAEVEKTSHIEPGNAKMSGATNSSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPVFRVNKKLGGNESANGENEKQSQRKTKWGPDLTQDSAVRRGRLI

Query:  AYQAQLKVNRKCVYFVYFVELLKCHTSLSLCILDKFLLISQGIIWDKILLPSLTIFIQLNIVNLLPLNFPFFLFGAKILLCDCFAWNIPIQVLLSDITAS
        AYQ                                                                                                 
Subjt:  AYQAQLKVNRKCVYFVYFVELLKCHTSLSLCILDKFLLISQGIIWDKILLPSLTIFIQLNIVNLLPLNFPFFLFGAKILLCDCFAWNIPIQVLLSDITAS

Query:  MTRLEQIMELLKSGTLEVPETQDSAIEAENVDDSPGSQATNEVRNNELLEIEKREVIGEILKLNPSYKAPPDYRPLLKADKLLLPVKEYPDYNFIGLIYG
         TRLEQIMELLKSGTLEVPETQDSAIEAENVDDSPGSQATNEVRNNELLEIEKREVIGEILKLNPSYKAPPDYRPLLKADKLLLPVKEYPDYNFIGLIYG
Subjt:  MTRLEQIMELLKSGTLEVPETQDSAIEAENVDDSPGSQATNEVRNNELLEIEKREVIGEILKLNPSYKAPPDYRPLLKADKLLLPVKEYPDYNFIGLIYG

Query:  PSGENQKRLEKETGAKIQICGIKPGTGEK
        PSGENQKRLEKETGAKIQICGIKPGTGEK
Subjt:  PSGENQKRLEKETGAKIQICGIKPGTGEK

XP_022995912.1 splicing factor 1-like isoform X2 [Cucurbita maxima]1.6e-10669Show/hide
Query:  MSAEVEKTSHIEPGNAKMSGATNSSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPVFRVNKKLGGNESANGENEKQSQRKTKWGPDLTQDSAVRRGRLI
        MSAEVEKTSHIEPGNAKMSGATNSSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPVFRVNKKLGGNESANG+NEKQSQRKTKWGPDLTQDSAVRRGRLI
Subjt:  MSAEVEKTSHIEPGNAKMSGATNSSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPVFRVNKKLGGNESANGENEKQSQRKTKWGPDLTQDSAVRRGRLI

Query:  AYQAQLKVNRKCVYFVYFVELLKCHTSLSLCILDKFLLISQGIIWDKILLPSLTIFIQLNIVNLLPLNFPFFLFGAKILLCDCFAWNIPIQVLLSDITAS
        AYQ                                                                                                 
Subjt:  AYQAQLKVNRKCVYFVYFVELLKCHTSLSLCILDKFLLISQGIIWDKILLPSLTIFIQLNIVNLLPLNFPFFLFGAKILLCDCFAWNIPIQVLLSDITAS

Query:  MTRLEQIMELLKSGTLEVPETQDSAIEAENVDDSPGSQATNEVRNNELLEIEKREVIGEILKLNPSYKAPPDYRPLLKADKLLLPVKEYPDYNFIGLIYG
         TRLEQIMELLKSGTLEVPETQDSAIEAENVDDS GSQATNEVRNNELLEIEKREVIGEILKLNPSYKAPPDYRPLLKADKLLLPVKEYPDYNFIGLIYG
Subjt:  MTRLEQIMELLKSGTLEVPETQDSAIEAENVDDSPGSQATNEVRNNELLEIEKREVIGEILKLNPSYKAPPDYRPLLKADKLLLPVKEYPDYNFIGLIYG

Query:  PSGENQKRLEKETGAKIQICGIKPGTGEK
        PSGENQKRLEKETGAKIQICGI+ GTGEK
Subjt:  PSGENQKRLEKETGAKIQICGIKPGTGEK

XP_023534206.1 branchpoint-bridging protein-like isoform X2 [Cucurbita pepo subsp. pepo]2.2e-10869.91Show/hide
Query:  MSAEVEKTSHIEPGNAKMSGATNSSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPVFRVNKKLGGNESANGENEKQSQRKTKWGPDLTQDSAVRRGRLI
        MSAEVEKTSHIEPGNAKMSGATNSSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPVFRVNKKLGGNESANGENEKQSQRKTKWGPDLTQDSAVRRGRLI
Subjt:  MSAEVEKTSHIEPGNAKMSGATNSSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPVFRVNKKLGGNESANGENEKQSQRKTKWGPDLTQDSAVRRGRLI

Query:  AYQAQLKVNRKCVYFVYFVELLKCHTSLSLCILDKFLLISQGIIWDKILLPSLTIFIQLNIVNLLPLNFPFFLFGAKILLCDCFAWNIPIQVLLSDITAS
        AYQ                                                                                                 
Subjt:  AYQAQLKVNRKCVYFVYFVELLKCHTSLSLCILDKFLLISQGIIWDKILLPSLTIFIQLNIVNLLPLNFPFFLFGAKILLCDCFAWNIPIQVLLSDITAS

Query:  MTRLEQIMELLKSGTLEVPETQDSAIEAENVDDSPGSQATNEVRNNELLEIEKREVIGEILKLNPSYKAPPDYRPLLKADKLLLPVKEYPDYNFIGLIYG
         TRLEQIMELLKSGTLEVPETQDSAIEAENVDDSPGSQATNEVRNNELLEIEKREVIGEILKLNPSYKAPPDYRPLLKADKLLLPVKEYPDYNFIGLIYG
Subjt:  MTRLEQIMELLKSGTLEVPETQDSAIEAENVDDSPGSQATNEVRNNELLEIEKREVIGEILKLNPSYKAPPDYRPLLKADKLLLPVKEYPDYNFIGLIYG

Query:  PSGENQKRLEKETGAKIQICGIKPGTGEK
        PSGENQKRLEKETGAKIQICGIK GTGEK
Subjt:  PSGENQKRLEKETGAKIQICGIKPGTGEK

TrEMBL top hitse value%identityAlignment
A0A6J1DII6 branchpoint-bridging protein isoform X24.1e-9260.91Show/hide
Query:  MSAEVEKTSHIEPGNAKMSGATNSSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPVFRVNKKLGGNESANGENEKQSQRKTKWGPDLTQDSAVRRGRLI
        MSAEVEKTSHIEPGN KMSGAT SS APMGSQKVSMFAAKTGFVIPKNKLSGSLVP+FRVNKK GGNES NGEN+KQ+QRKTKWGPDLTQD+AVR+GRLI
Subjt:  MSAEVEKTSHIEPGNAKMSGATNSSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPVFRVNKKLGGNESANGENEKQSQRKTKWGPDLTQDSAVRRGRLI

Query:  AYQAQLKVNRKCVYFVYFVELLKCHTSLSLCILDKFLLISQGIIWDKILLPSLTIFIQLNIVNLLPLNFPFFLFGAKILLCDCFAWNIPIQVLLSDITAS
        AYQ                                                                                                 
Subjt:  AYQAQLKVNRKCVYFVYFVELLKCHTSLSLCILDKFLLISQGIIWDKILLPSLTIFIQLNIVNLLPLNFPFFLFGAKILLCDCFAWNIPIQVLLSDITAS

Query:  MTRLEQIMELLKSGTLEVPETQDSAIEAENVDD-SPGSQATNEVRNNELLEIEKREVIGEILKLNPSYKAPPDYRPLLKADKLLLPVKEYPDYNFIGLIY
         TRLEQI ELLKSGTLEVPETQDSA+ AENV+D SPGSQA+++V+N ELLE+EKREVIGEILKLNPSYKAPPDYRPLLK D+  LPVKEYP YNFIGLIY
Subjt:  MTRLEQIMELLKSGTLEVPETQDSAIEAENVDD-SPGSQATNEVRNNELLEIEKREVIGEILKLNPSYKAPPDYRPLLKADKLLLPVKEYPDYNFIGLIY

Query:  GPSGENQKRLEKETGAKIQICGIKPGTGEK
        GPSGENQKRLEKETG K++ICGIK  TGEK
Subjt:  GPSGENQKRLEKETGAKIQICGIKPGTGEK

A0A6J1H260 branchpoint-bridging protein-like isoform X21.3e-10970.21Show/hide
Query:  MSAEVEKTSHIEPGNAKMSGATNSSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPVFRVNKKLGGNESANGENEKQSQRKTKWGPDLTQDSAVRRGRLI
        MSAEVEKTSHIEPGNAKMSGATNSSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPVFRVNKKLGGNESANGENEKQSQRKTKWGPDLTQDSAVRRGRLI
Subjt:  MSAEVEKTSHIEPGNAKMSGATNSSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPVFRVNKKLGGNESANGENEKQSQRKTKWGPDLTQDSAVRRGRLI

Query:  AYQAQLKVNRKCVYFVYFVELLKCHTSLSLCILDKFLLISQGIIWDKILLPSLTIFIQLNIVNLLPLNFPFFLFGAKILLCDCFAWNIPIQVLLSDITAS
        AYQ                                                                                                 
Subjt:  AYQAQLKVNRKCVYFVYFVELLKCHTSLSLCILDKFLLISQGIIWDKILLPSLTIFIQLNIVNLLPLNFPFFLFGAKILLCDCFAWNIPIQVLLSDITAS

Query:  MTRLEQIMELLKSGTLEVPETQDSAIEAENVDDSPGSQATNEVRNNELLEIEKREVIGEILKLNPSYKAPPDYRPLLKADKLLLPVKEYPDYNFIGLIYG
         TRLEQIMELLKSGTLEVPETQDSAIEAENVDDSPGSQATNEVRNNELLEIEKREVIGEILKLNPSYKAPPDYRPLLKADKLLLPVKEYPDYNFIGLIYG
Subjt:  MTRLEQIMELLKSGTLEVPETQDSAIEAENVDDSPGSQATNEVRNNELLEIEKREVIGEILKLNPSYKAPPDYRPLLKADKLLLPVKEYPDYNFIGLIYG

Query:  PSGENQKRLEKETGAKIQICGIKPGTGEK
        PSGENQKRLEKETGAKIQICGIKPGTGEK
Subjt:  PSGENQKRLEKETGAKIQICGIKPGTGEK

A0A6J1H2E4 branchpoint-bridging protein-like isoform X13.3e-10564.89Show/hide
Query:  MSAEVEKTSHIEPGNAKMSGATNSSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPVFRVNKKLGGNESANGENEKQSQRKTKWGPDLTQDSAVRRGRLI
        MSAEVEKTSHIEPGNAKMSGATNSSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPVFRVNKKLGGNESANGENEKQSQRKTKWGPDLTQDSAVRRGRLI
Subjt:  MSAEVEKTSHIEPGNAKMSGATNSSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPVFRVNKKLGGNESANGENEKQSQRKTKWGPDLTQDSAVRRGRLI

Query:  AYQAQLKVNRKCVYFVYFVELLKCHTSLSLCILDKFLLISQGIIWDKILLPSLTIFIQLNIVNLLPLNFPFFLFGAKILLCDCFAWNIPIQVLLSDITAS
        AYQ                                                                                                 
Subjt:  AYQAQLKVNRKCVYFVYFVELLKCHTSLSLCILDKFLLISQGIIWDKILLPSLTIFIQLNIVNLLPLNFPFFLFGAKILLCDCFAWNIPIQVLLSDITAS

Query:  MTRLEQIMELLKSGTLEVPETQDSAIEAENVDDSPGSQATNE---------------------------VRNNELLEIEKREVIGEILKLNPSYKAPPDY
         TRLEQIMELLKSGTLEVPETQDSAIEAENVDDSPGSQATNE                           VRNNELLEIEKREVIGEILKLNPSYKAPPDY
Subjt:  MTRLEQIMELLKSGTLEVPETQDSAIEAENVDDSPGSQATNE---------------------------VRNNELLEIEKREVIGEILKLNPSYKAPPDY

Query:  RPLLKADKLLLPVKEYPDYNFIGLIYGPSGENQKRLEKETGAKIQICGIKPGTGEK
        RPLLKADKLLLPVKEYPDYNFIGLIYGPSGENQKRLEKETGAKIQICGIKPGTGEK
Subjt:  RPLLKADKLLLPVKEYPDYNFIGLIYGPSGENQKRLEKETGAKIQICGIKPGTGEK

A0A6J1K0A6 splicing factor 1-like isoform X27.8e-10769Show/hide
Query:  MSAEVEKTSHIEPGNAKMSGATNSSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPVFRVNKKLGGNESANGENEKQSQRKTKWGPDLTQDSAVRRGRLI
        MSAEVEKTSHIEPGNAKMSGATNSSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPVFRVNKKLGGNESANG+NEKQSQRKTKWGPDLTQDSAVRRGRLI
Subjt:  MSAEVEKTSHIEPGNAKMSGATNSSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPVFRVNKKLGGNESANGENEKQSQRKTKWGPDLTQDSAVRRGRLI

Query:  AYQAQLKVNRKCVYFVYFVELLKCHTSLSLCILDKFLLISQGIIWDKILLPSLTIFIQLNIVNLLPLNFPFFLFGAKILLCDCFAWNIPIQVLLSDITAS
        AYQ                                                                                                 
Subjt:  AYQAQLKVNRKCVYFVYFVELLKCHTSLSLCILDKFLLISQGIIWDKILLPSLTIFIQLNIVNLLPLNFPFFLFGAKILLCDCFAWNIPIQVLLSDITAS

Query:  MTRLEQIMELLKSGTLEVPETQDSAIEAENVDDSPGSQATNEVRNNELLEIEKREVIGEILKLNPSYKAPPDYRPLLKADKLLLPVKEYPDYNFIGLIYG
         TRLEQIMELLKSGTLEVPETQDSAIEAENVDDS GSQATNEVRNNELLEIEKREVIGEILKLNPSYKAPPDYRPLLKADKLLLPVKEYPDYNFIGLIYG
Subjt:  MTRLEQIMELLKSGTLEVPETQDSAIEAENVDDSPGSQATNEVRNNELLEIEKREVIGEILKLNPSYKAPPDYRPLLKADKLLLPVKEYPDYNFIGLIYG

Query:  PSGENQKRLEKETGAKIQICGIKPGTGEK
        PSGENQKRLEKETGAKIQICGI+ GTGEK
Subjt:  PSGENQKRLEKETGAKIQICGIKPGTGEK

A0A6J1K377 branchpoint-bridging protein-like isoform X12.0e-10263.76Show/hide
Query:  MSAEVEKTSHIEPGNAKMSGATNSSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPVFRVNKKLGGNESANGENEKQSQRKTKWGPDLTQDSAVRRGRLI
        MSAEVEKTSHIEPGNAKMSGATNSSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPVFRVNKKLGGNESANG+NEKQSQRKTKWGPDLTQDSAVRRGRLI
Subjt:  MSAEVEKTSHIEPGNAKMSGATNSSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPVFRVNKKLGGNESANGENEKQSQRKTKWGPDLTQDSAVRRGRLI

Query:  AYQAQLKVNRKCVYFVYFVELLKCHTSLSLCILDKFLLISQGIIWDKILLPSLTIFIQLNIVNLLPLNFPFFLFGAKILLCDCFAWNIPIQVLLSDITAS
        AYQ                                                                                                 
Subjt:  AYQAQLKVNRKCVYFVYFVELLKCHTSLSLCILDKFLLISQGIIWDKILLPSLTIFIQLNIVNLLPLNFPFFLFGAKILLCDCFAWNIPIQVLLSDITAS

Query:  MTRLEQIMELLKSGTLEVPETQDSAIEAENVDDSPGSQATNE---------------------------VRNNELLEIEKREVIGEILKLNPSYKAPPDY
         TRLEQIMELLKSGTLEVPETQDSAIEAENVDDS GSQATNE                           VRNNELLEIEKREVIGEILKLNPSYKAPPDY
Subjt:  MTRLEQIMELLKSGTLEVPETQDSAIEAENVDDSPGSQATNE---------------------------VRNNELLEIEKREVIGEILKLNPSYKAPPDY

Query:  RPLLKADKLLLPVKEYPDYNFIGLIYGPSGENQKRLEKETGAKIQICGIKPGTGEK
        RPLLKADKLLLPVKEYPDYNFIGLIYGPSGENQKRLEKETGAKIQICGI+ GTGEK
Subjt:  RPLLKADKLLLPVKEYPDYNFIGLIYGPSGENQKRLEKETGAKIQICGIKPGTGEK

SwissProt top hitse value%identityAlignment
Q15637 Splicing factor 11.4e-1538.21Show/hide
Query:  RLEQIMELLKSGTLEV-PETQDSAIEAENVDDSPGSQA-TNEVRNNELLEIEKREVIGEILKLNPSYKAPPDYRP--LLKADKLLLPVKEYPDYNFIGLI
        ++E +   L++G L + P  +D +   E + +S G +  T E R  + LE E+  +I E++ LNP +K P DY+P     +DK+++P  EYP+ NF+GL+
Subjt:  RLEQIMELLKSGTLEV-PETQDSAIEAENVDDSPGSQA-TNEVRNNELLEIEKREVIGEILKLNPSYKAPPDYRP--LLKADKLLLPVKEYPDYNFIGLI

Query:  YGPSGENQKRLEKETGAKIQICG
         GP G   K +EKE  AKI I G
Subjt:  YGPSGENQKRLEKETGAKIQICG

Q4P0H7 Branchpoint-bridging protein7.9e-1631.38Show/hide
Query:  KILLCDCFAWNIPIQVLLSDITASMTRLEQIMELLKSGTLEVPETQDSAIEAENVDDSPGSQATNEVRNNELLEIEKREVIGEILKLNPSYKAPPDYRPL
        KI +      N+  Q L  D  A   RL++I   L+SG    P+ + S       D+      T EVR  + LE E+  ++   LKL+P+++ P DY  +
Subjt:  KILLCDCFAWNIPIQVLLSDITASMTRLEQIMELLKSGTLEVPETQDSAIEAENVDDSPGSQATNEVRNNELLEIEKREVIGEILKLNPSYKAPPDYRPL

Query:  LK----ADKLLLPVKEYPDYNFIGLIYGPSGENQKRLEKETGAKIQICG---IKPGTGEKVIPLTHEIHDMVYTSYTQSVVLSCSNLL
         +     +K+ LP+KE+P+  F GL+ GP G   K +E+++GAKI I G   +K G G+       E    V T+  ++ V  C  L+
Subjt:  LK----ADKLLLPVKEYPDYNFIGLIYGPSGENQKRLEKETGAKIQICG---IKPGTGEKVIPLTHEIHDMVYTSYTQSVVLSCSNLL

Q54BM5 Branchpoint-bridging protein2.1e-1634.87Show/hide
Query:  RLEQIMELLKSGTLEVPE--TQDSAIEAENVDDSPGSQATNEVRNNELLEIEKREVIGEILKLNPSYKAPPDYRP--LLKADKLLLPVKEYPDYNFIGLI
        R+++I + +  G +E  E   + S       D++     T E R  E L+ E+ +++    ++NP+YK P DY+P    K  K+ +P+K +P+YNFIGLI
Subjt:  RLEQIMELLKSGTLEVPE--TQDSAIEAENVDDSPGSQATNEVRNNELLEIEKREVIGEILKLNPSYKAPPDYRP--LLKADKLLLPVKEYPDYNFIGLI

Query:  YGPSGENQKRLEKETGAKIQICGIKPGTGEKVIPLTHEIHDMVYTSYTQSVV
         GP G  QKR+EKE+GAKI I G       K   L  + +D ++   T   V
Subjt:  YGPSGENQKRLEKETGAKIQICGIKPGTGEKVIPLTHEIHDMVYTSYTQSVV

Q64213 Splicing factor 11.8e-1538.21Show/hide
Query:  RLEQIMELLKSGTLEV-PETQDSAIEAENVDDSPGSQA-TNEVRNNELLEIEKREVIGEILKLNPSYKAPPDYRP--LLKADKLLLPVKEYPDYNFIGLI
        ++E +   L++G L + P  +D +   E + +S G +  T E R  + LE E+  +I E++ LNP +K P DY+P     +DK+++P  EYP+ NF+GL+
Subjt:  RLEQIMELLKSGTLEV-PETQDSAIEAENVDDSPGSQA-TNEVRNNELLEIEKREVIGEILKLNPSYKAPPDYRP--LLKADKLLLPVKEYPDYNFIGLI

Query:  YGPSGENQKRLEKETGAKIQICG
         GP G   K +EKE  AKI I G
Subjt:  YGPSGENQKRLEKETGAKIQICG

Q9LU44 Splicing factor-like protein 11.4e-2048.06Show/hide
Query:  DITASMTRLEQIMELLKSGTL--EVPETQDSAIEAENVDDSPGSQA-TNEVRNNELLEIEKREVIGEILKLNPSYKAPPDYRPLLKADKLLLPVKEYPDY
        +I A  +RL +I  +L+SG    + PE Q S    E V D+ G +  T E R  E L  E++E+I +I+K NP++K P DYRP     KL +P+KE+P Y
Subjt:  DITASMTRLEQIMELLKSGTL--EVPETQDSAIEAENVDDSPGSQA-TNEVRNNELLEIEKREVIGEILKLNPSYKAPPDYRPLLKADKLLLPVKEYPDY

Query:  NFIGLIYGPSGENQKRLEKETGAKIQICG
        NFIGLI GP G  QKR+E+ETGAKI I G
Subjt:  NFIGLIYGPSGENQKRLEKETGAKIQICG

Arabidopsis top hitse value%identityAlignment
AT3G08620.1 RNA-binding KH domain-containing protein2.6e-0641.51Show/hide
Query:  APPDYRPLLKADKLLLPVKEYPDYNFIGLIYGPSGENQKRLEKETGAKIQICG
        A P   P+ +  +L LPV  YP++NF+G + GP G + KR+E  TG ++ I G
Subjt:  APPDYRPLLKADKLLLPVKEYPDYNFIGLIYGPSGENQKRLEKETGAKIQICG

AT3G32940.1 RNA-binding KH domain-containing protein2.2e-3737.62Show/hide
Query:  TNSSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPVF-RVNKKLGGNESANGENEK-QSQRKTKWGPDLTQDSAVRRGRLIAYQAQLKVNRKCVYFVYFV
        T++SAA     K+SMF AK+GFVIPKNKLSGSL+P+F R NK LG  +S  G   K   +RKTKW PDL+QD AV++ R +AYQ                
Subjt:  TNSSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPVF-RVNKKLGGNESANGENEK-QSQRKTKWGPDLTQDSAVRRGRLIAYQAQLKVNRKCVYFVYFV

Query:  ELLKCHTSLSLCILDKFLLISQGIIWDKILLPSLTIFIQLNIVNLLPLNFPFFLFGAKILLCDCFAWNIPIQVLLSDITASMTRLEQIMELLKSGTLEVP
                                                                                           R++QI + L+SGTLEV 
Subjt:  ELLKCHTSLSLCILDKFLLISQGIIWDKILLPSLTIFIQLNIVNLLPLNFPFFLFGAKILLCDCFAWNIPIQVLLSDITASMTRLEQIMELLKSGTLEVP

Query:  ETQDSAIEAENVDDSPGSQATNEVRNNELLEIEKREVIGEILKLNPSYKAPPDYRPLLKADKLLLPVKEYPDYNFIGLIYGPSGENQKRLEKETGAKIQI
        ET                       N   LE EKRE IGEIL+LNP YKAPPDY+PLLK  +L + VKE+ D++F+ LI+G  G+ QKRLEKETGAK+QI
Subjt:  ETQDSAIEAENVDDSPGSQATNEVRNNELLEIEKREVIGEILKLNPSYKAPPDYRPLLKADKLLLPVKEYPDYNFIGLIYGPSGENQKRLEKETGAKIQI

Query:  CGIKPGTGEKV
         G K G GEKV
Subjt:  CGIKPGTGEKV

AT5G51300.1 splicing factor-related9.9e-2248.06Show/hide
Query:  DITASMTRLEQIMELLKSGTL--EVPETQDSAIEAENVDDSPGSQA-TNEVRNNELLEIEKREVIGEILKLNPSYKAPPDYRPLLKADKLLLPVKEYPDY
        +I A  +RL +I  +L+SG    + PE Q S    E V D+ G +  T E R  E L  E++E+I +I+K NP++K P DYRP     KL +P+KE+P Y
Subjt:  DITASMTRLEQIMELLKSGTL--EVPETQDSAIEAENVDDSPGSQA-TNEVRNNELLEIEKREVIGEILKLNPSYKAPPDYRPLLKADKLLLPVKEYPDY

Query:  NFIGLIYGPSGENQKRLEKETGAKIQICG
        NFIGLI GP G  QKR+E+ETGAKI I G
Subjt:  NFIGLIYGPSGENQKRLEKETGAKIQICG

AT5G51300.2 splicing factor-related9.9e-2248.06Show/hide
Query:  DITASMTRLEQIMELLKSGTL--EVPETQDSAIEAENVDDSPGSQA-TNEVRNNELLEIEKREVIGEILKLNPSYKAPPDYRPLLKADKLLLPVKEYPDY
        +I A  +RL +I  +L+SG    + PE Q S    E V D+ G +  T E R  E L  E++E+I +I+K NP++K P DYRP     KL +P+KE+P Y
Subjt:  DITASMTRLEQIMELLKSGTL--EVPETQDSAIEAENVDDSPGSQA-TNEVRNNELLEIEKREVIGEILKLNPSYKAPPDYRPLLKADKLLLPVKEYPDY

Query:  NFIGLIYGPSGENQKRLEKETGAKIQICG
        NFIGLI GP G  QKR+E+ETGAKI I G
Subjt:  NFIGLIYGPSGENQKRLEKETGAKIQICG

AT5G51300.3 splicing factor-related9.9e-2248.06Show/hide
Query:  DITASMTRLEQIMELLKSGTL--EVPETQDSAIEAENVDDSPGSQA-TNEVRNNELLEIEKREVIGEILKLNPSYKAPPDYRPLLKADKLLLPVKEYPDY
        +I A  +RL +I  +L+SG    + PE Q S    E V D+ G +  T E R  E L  E++E+I +I+K NP++K P DYRP     KL +P+KE+P Y
Subjt:  DITASMTRLEQIMELLKSGTL--EVPETQDSAIEAENVDDSPGSQA-TNEVRNNELLEIEKREVIGEILKLNPSYKAPPDYRPLLKADKLLLPVKEYPDY

Query:  NFIGLIYGPSGENQKRLEKETGAKIQICG
        NFIGLI GP G  QKR+E+ETGAKI I G
Subjt:  NFIGLIYGPSGENQKRLEKETGAKIQICG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGCAGAGGTTGAAAAGACGTCGCATATTGAACCGGGAAATGCAAAGATGTCTGGAGCAACTAATTCATCTGCTGCACCAATGGGAAGCCAAAAGGTTTCCATGTT
TGCAGCGAAGACTGGGTTTGTTATACCAAAAAACAAGCTTTCAGGATCTTTGGTTCCCGTCTTTCGAGTGAACAAGAAGTTGGGAGGGAATGAATCAGCTAATGGAGAAA
ATGAGAAACAGTCTCAAAGAAAAACAAAGTGGGGTCCTGATCTAACACAGGATTCTGCAGTTAGAAGGGGGAGGCTCATAGCTTATCAGGCACAACTCAAAGTCAATAGA
AAATGCGTTTATTTTGTTTATTTTGTGGAGCTTTTGAAGTGTCACACTTCCCTATCACTGTGTATCTTGGATAAATTCCTACTCATATCTCAAGGTATAATATGGGATAA
AATCCTTCTCCCATCTTTGACCATTTTCATACAGTTGAATATTGTCAATTTGCTACCATTGAATTTCCCCTTTTTCTTATTTGGTGCTAAAATTCTTCTGTGTGACTGTT
TCGCATGGAACATTCCCATCCAGGTGCTACTTAGTGACATAACTGCCTCTATGACTCGATTGGAACAAATCATGGAACTCCTTAAGTCTGGAACCCTGGAGGTTCCAGAG
ACACAAGATTCAGCAATAGAAGCTGAGAATGTTGATGATTCCCCGGGATCCCAAGCAACTAATGAGGTGCGAAACAACGAACTTTTGGAGATTGAGAAACGTGAAGTTAT
TGGTGAAATACTAAAACTGAATCCAAGTTATAAGGCCCCTCCTGATTATAGGCCCTTGTTGAAAGCAGACAAGTTACTTCTCCCAGTTAAAGAATATCCTGATTACAACT
TTATTGGCTTAATATACGGCCCCAGTGGGGAAAATCAAAAGCGATTAGAAAAGGAAACTGGAGCCAAAATACAAATTTGTGGTATTAAACCTGGGACAGGTGAAAAGGTG
ATCCCTTTGACTCATGAAATTCATGATATGGTCTATACCAGTTATACACAGTCTGTCGTGTTATCTTGTTCTAATCTTTTATTCTTACTGCAAAATATATGA
mRNA sequenceShow/hide mRNA sequence
AAGCAATTTCCCGGAGCACTTTGTGTGCTCTCGTAAGTGCGTCAATTCTTCATTGTGGATTCAGTTTTGAAGAACGCAGCGGTTCAGGTGATTGGAGAACAATATGAGTG
CAGAGGTTGAAAAGACGTCGCATATTGAACCGGGAAATGCAAAGATGTCTGGAGCAACTAATTCATCTGCTGCACCAATGGGAAGCCAAAAGGTTTCCATGTTTGCAGCG
AAGACTGGGTTTGTTATACCAAAAAACAAGCTTTCAGGATCTTTGGTTCCCGTCTTTCGAGTGAACAAGAAGTTGGGAGGGAATGAATCAGCTAATGGAGAAAATGAGAA
ACAGTCTCAAAGAAAAACAAAGTGGGGTCCTGATCTAACACAGGATTCTGCAGTTAGAAGGGGGAGGCTCATAGCTTATCAGGCACAACTCAAAGTCAATAGAAAATGCG
TTTATTTTGTTTATTTTGTGGAGCTTTTGAAGTGTCACACTTCCCTATCACTGTGTATCTTGGATAAATTCCTACTCATATCTCAAGGTATAATATGGGATAAAATCCTT
CTCCCATCTTTGACCATTTTCATACAGTTGAATATTGTCAATTTGCTACCATTGAATTTCCCCTTTTTCTTATTTGGTGCTAAAATTCTTCTGTGTGACTGTTTCGCATG
GAACATTCCCATCCAGGTGCTACTTAGTGACATAACTGCCTCTATGACTCGATTGGAACAAATCATGGAACTCCTTAAGTCTGGAACCCTGGAGGTTCCAGAGACACAAG
ATTCAGCAATAGAAGCTGAGAATGTTGATGATTCCCCGGGATCCCAAGCAACTAATGAGGTGCGAAACAACGAACTTTTGGAGATTGAGAAACGTGAAGTTATTGGTGAA
ATACTAAAACTGAATCCAAGTTATAAGGCCCCTCCTGATTATAGGCCCTTGTTGAAAGCAGACAAGTTACTTCTCCCAGTTAAAGAATATCCTGATTACAACTTTATTGG
CTTAATATACGGCCCCAGTGGGGAAAATCAAAAGCGATTAGAAAAGGAAACTGGAGCCAAAATACAAATTTGTGGTATTAAACCTGGGACAGGTGAAAAGGTGATCCCTT
TGACTCATGAAATTCATGATATGGTCTATACCAGTTATACACAGTCTGTCGTGTTATCTTGTTCTAATCTTTTATTCTTACTGCAAAATATATGAGCACCTCAGGGCTTT
TTAGCTGTCAAGAATCTCTTCAGAAGTCTCTTTTACTTTTTATTTGTTCCAAAGCTCACTAGATCAACCTGTGGCTGTTTATTTTGTCTAGAAGTTAGAGTCTGTTCTGT
GAGAATGGCTCTGAAGTTTGAAGGCACCTCAGGGTTCTTTTAATTTTGCCGAGGTTTAAAACTTGAGGGAGTTGTGAACTATAGTTTTTGTTAGATATTGTCTTCTTTGG
GTTTTCCCTTCCGAGCTTCCCTTCAAAGTTTTAAAACACGTCCGCTAGGGAGAGGTTTCCACACCTTTATAAAGAATGCTTAGTTCCCCTCTTCAACCGATGTGGGATCC
ACAATCCATCTACTTTGGGGCCAGCGTCCTTGCTGGCACTCGTTTCCCTCTCCAATCAATATGAGATCTCACAGTTTTACTCTTTGTATCTCCCTGCCCCTCTTCTTGCA
GGACGAAATTAAACCAACTGATGGACACGAAGCTCAGAGTGGTTATGAAGAGCTGTATGTTTGCATGTCAGCTGATACATTTGATAAGATCGACGCTGCAATTTCTGTTA
TAGAACTCCTAATCACCTCAATATTGGGAAATTTGGCCACTGGTCCCACGTCGTCCGATTTGGTTTCTAGGGGGGAAAGTTCTTCCACCCGAGCCGAGGGTACGGTATCA
AATGTTGGGCAGACTCCTATGCCAAACCAGGGGGTTATGCTACAAGGAGAGGTTTATGCGCCAACTTCAGCACAAGGGCAGTTTCATTATCCTAACACATGGTTGCCAAG
GGGCCCTTCTCACACTTTAACCCCTGCTCCTGGATTTATTTCCCCACAAGATCCTCCATCAATTACGAACAACCCGATCCATTTGTCTCGCCCACCTACTCCAATTCCTT
TCAACCCAGCTTTCCGGCCCCCCCCTGTTCATCCTCCCAGACACCAGTTTCCTGCACAAGACATGCAGCAACCTTTCATGACTCAGCCCAGTCACGTTGGTCAACCTGGG
GTTCATCCTTTGACAATTCAACGGCCTTCATTGGTTCAATCTAGCGTCTCAAATCCAAACTTCACTGGCAGTGGTCCATTACCTTCAGGTCTACTCCTAAATATGCCAGG
GTCATCAATTCCCTCTTCCTTGCCTCAACATGTTCCCAATAGCATTCCTTCAGGATCACTGCCTGATCGCCCTTTGGCACCTCCTAGCACAGTTTCTACTGGTTTTTCTG
GACACCATCCACCGCAGGGTCCAAATAACATGGGACAGACGGCTCTATCATTTCCCCCACCCTTAGGACCTCGTGCAGCTCCACTGCAGGGTGTTAATTCTTCTAGCGCA
GTACCTGCAAATACAGCAGTAGCCAATGTGGATGCATATGCATCTTTTCCTTCTGGACCATCCACCCCCCAGGCTCCAATTCCGTCACCCCATATAGGGCATCGCCCACC
ATTTTCAGTTCCTTCAGCACTATTACCCCCAACAGCACATAACCCAGCTGGTAACTTCATTGCTGGATCTGCTTTAACCCGTCCAACACCACCTACAAATACAAGTAACT
TTACATTTCAACCACTGGGTCCACCAAACCCGTCTGCTCAACCAATGCTCAATTTGAACATTCAAAACTCACCAACCGTACCTTCATTGCAGCAGCCTGCATCTGGGGCG
CCATCTTTCCATCCGGCTGCCCCAAATTTTTCCAGAGTTGGGAATCAACCATTTCCCGGACCCCAAGCTGGTAGCCAGATTGGTAATCATCGAATCCAAGAGGTCTCAAC
TAGGCTTCCTGCTTTCCTTGACCCAGGTCCTCGGACACAACTGCATCAGAGAAACTTTAGACCAAGTATGCAAATGCAAATGCCGAATTTGCAGGGCAATTTTCCTCACA
GACCAGGGAACCATATGCAACTTGAACAAGGTTTCCTCATGCAAGCTACTCGACCTGATGTCCGGTTTGCTCCTCCACACTACAGTGGCAATCTGACATTTGTTTCTGGC
CAGCCGCCTCCAAGTTCCGGAGGGCAGCAAGTTTATGATCCGTTCTCTCCTACATCTGTGTCTGGCACACAACAACAGGGGAGCAATCTTCCTAGATGAGAACTGTCAAA
CCGCATCAGGTGTTTGTAGTACTTAGTTAGTCCAAGTGCTGCATGGACTTCCGGGATCACCCATTAAGGCCCCAAAATGGCCACTCTAAAGAATGTAGGTGAGTGTGATG
AGCATCTACTAAGCTCATAGATCAAAGCTTGACTGTATTTATGTTCCGCTCAAAAATATGAAAAATTACTTAGAATGGATATGTGATTCAATACTTTGCTGGTGAACTGA
GCAAGCTCAACTAGTGACCTCTATTTTCTGACATATAAGCTTCTGATTCCCCC
Protein sequenceShow/hide protein sequence
MSAEVEKTSHIEPGNAKMSGATNSSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPVFRVNKKLGGNESANGENEKQSQRKTKWGPDLTQDSAVRRGRLIAYQAQLKVNR
KCVYFVYFVELLKCHTSLSLCILDKFLLISQGIIWDKILLPSLTIFIQLNIVNLLPLNFPFFLFGAKILLCDCFAWNIPIQVLLSDITASMTRLEQIMELLKSGTLEVPE
TQDSAIEAENVDDSPGSQATNEVRNNELLEIEKREVIGEILKLNPSYKAPPDYRPLLKADKLLLPVKEYPDYNFIGLIYGPSGENQKRLEKETGAKIQICGIKPGTGEKV
IPLTHEIHDMVYTSYTQSVVLSCSNLLFLLQNI