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CmoCh02G012450 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G012450
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr02:7474973..7475910
RNA-Seq ExpressionCmoCh02G012450
SyntenyCmoCh02G012450
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605875.1 hypothetical protein SDJN03_03192, partial [Cucurbita argyrosperma subsp. sororia]4.5e-3298.65Show/hide
Query:  MRASELSTPTNPTNTVECKDRPHKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPFQFSVSESKNSSKMG
        MRASELSTPTNPT TVECKDRPHKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPFQFSVSESKNSSKMG
Subjt:  MRASELSTPTNPTNTVECKDRPHKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPFQFSVSESKNSSKMG

KAG7035826.1 hypothetical protein SDJN02_02625 [Cucurbita argyrosperma subsp. argyrosperma]3.8e-3197.3Show/hide
Query:  MRASELSTPTNPTNTVECKDRPHKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPFQFSVSESKNSSKMG
        MRASELSTPTNPT TVECKDRP KPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPFQFSVSESKNSSKMG
Subjt:  MRASELSTPTNPTNTVECKDRPHKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPFQFSVSESKNSSKMG

KGN54090.1 hypothetical protein Csa_017904 [Cucumis sativus]2.9e-2379.73Show/hide
Query:  MRASELSTPTNPTNTVECKDRPHKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPFQFSVSESKNSSKMG
        M+ASELS   +P+NTVECK+RP KPPFRPAKDDTKL+LQDPIRRSDPIETEEAVLRPPPF FS+ +SKN S+MG
Subjt:  MRASELSTPTNPTNTVECKDRPHKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPFQFSVSESKNSSKMG

XP_022995760.1 uncharacterized protein LOC111491196 [Cucurbita maxima]1.6e-2993.24Show/hide
Query:  MRASELSTPTNPTNTVECKDRPHKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPFQFSVSESKNSSKMG
        MR SELSTPTNPTN  ECKDRP KPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPFQFSVS+SKNSSKMG
Subjt:  MRASELSTPTNPTNTVECKDRPHKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPFQFSVSESKNSSKMG

XP_030954067.1 uncharacterized protein LOC115976712 [Quercus lobata]7.5e-1161.11Show/hide
Query:  MRASELSTPTNPTNTVECKDRPHKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPFQFSVSESKNSSK
        M+ SE+S  +N  N     ++P KP FRPA+DDTK VLQDPI RSDPIETEEAVLR PPF  + S S  SSK
Subjt:  MRASELSTPTNPTNTVECKDRPHKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPFQFSVSESKNSSK

TrEMBL top hitse value%identityAlignment
A0A0A0KWV8 Uncharacterized protein1.4e-2379.73Show/hide
Query:  MRASELSTPTNPTNTVECKDRPHKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPFQFSVSESKNSSKMG
        M+ASELS   +P+NTVECK+RP KPPFRPAKDDTKL+LQDPIRRSDPIETEEAVLRPPPF FS+ +SKN S+MG
Subjt:  MRASELSTPTNPTNTVECKDRPHKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPFQFSVSESKNSSKMG

A0A1Q3CXU0 Uncharacterized protein1.8e-1066.13Show/hide
Query:  MRASELSTPTNP-TNTVECK-DRPHKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPF
        MRA+E+S  +N  +N  + K D+P KPPFRPAKDDTK  L DP+ RSDPIETEEAVLR PPF
Subjt:  MRASELSTPTNP-TNTVECK-DRPHKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPF

A0A1U7ZV42 uncharacterized protein LOC1045975931.1e-1064.52Show/hide
Query:  MRASELSTPTNPT--NTVECKDRPHKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPF
        M+ SE+   T+ +   T    D+P KPPFRPAKDDTK +LQDPI RSDPIETEEAVLR PPF
Subjt:  MRASELSTPTNPT--NTVECKDRPHKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPF

A0A6J1K4U9 uncharacterized protein LOC1114911967.8e-3093.24Show/hide
Query:  MRASELSTPTNPTNTVECKDRPHKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPFQFSVSESKNSSKMG
        MR SELSTPTNPTN  ECKDRP KPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPFQFSVS+SKNSSKMG
Subjt:  MRASELSTPTNPTNTVECKDRPHKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPFQFSVSESKNSSKMG

W9QLE6 Uncharacterized protein1.4e-1060.56Show/hide
Query:  MRASELST-PTNPTNTVECKDRPHKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPFQFSVSESKNS
        M+ASE S  P+N  N  + +++P KP FRPAKDDTK +LQDPI RSDPIETEEAVLR PPF F+ + +  S
Subjt:  MRASELST-PTNPTNTVECKDRPHKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPFQFSVSESKNS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G20480.1 unknown protein3.6e-1167.92Show/hide
Query:  TPTNPTNTVECKDRPHKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPF
        TP  P  TV    +  KPPFRPA DDTK VLQDPI RSDP+ETEEAVLR P F
Subjt:  TPTNPTNTVECKDRPHKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGCTTCAGAGCTTTCAACTCCAACCAATCCGACGAATACTGTAGAATGCAAGGACAGGCCCCATAAACCGCCGTTCAGGCCTGCTAAAGATGACACCAAACTTGT
TCTCCAAGATCCGATACGGAGGTCAGATCCAATTGAGACAGAGGAAGCCGTGCTCCGACCGCCTCCCTTCCAATTCTCCGTCTCGGAATCAAAGAATTCTTCTAAAATGG
GATGA
mRNA sequenceShow/hide mRNA sequence
AGAAAATTTGGAAATCGGCCATTGAACTGCAAATTTCTGATCGGAGAACCTTTCGAAGCTTCAACCAGTGACGATGAGAGCTTCAGAGCTTTCAACTCCAACCAATCCGA
CGAATACTGTAGAATGCAAGGACAGGCCCCATAAACCGCCGTTCAGGCCTGCTAAAGATGACACCAAACTTGTTCTCCAAGATCCGATACGGAGGTCAGATCCAATTGAG
ACAGAGGAAGCCGTGCTCCGACCGCCTCCCTTCCAATTCTCCGTCTCGGAATCAAAGAATTCTTCTAAAATGGGATGAAAGTGTTGTTGTTGTTGTTGTTTTTTTTAGAT
TCTGTCTGTTTTTGGTTCATGCTGTGATCGCGTGGTGGAATTTCGAACAATTAATGAAAATAGATAGTCCAATTTTTTCTACTCGTGACCGAATAGTAATTCCACTATCC
AGTTGAATCAAATTTAGCTTCCAAGTCTTATAATTTATTACTGTGATGGTAGAAAACCATAACGACACGCATTAGTCATCAATCAATTGATTGTGCGTACCAGTTGTTCG
ACGAAATGCTTAAGTGGGAAGTAAGCTTTGAGATGACCAACCACTTCGCTTTTTGTTTGTCATCAGACGCCTGTGAGTGCTGATTTGCCCTTGTCTGTTCGGGCTGGTTG
GTGAGGGCAACCGCAGGAGCCATTTGGACCATTCAGAGCCGATTCCAATCTCCATAACCAGATTGGTGAACATACAGGTACGCCCACCATATATATATATATCCTCTTAC
TTTACTTGGTATTCAAAATACAAAGTTTAG
Protein sequenceShow/hide protein sequence
MRASELSTPTNPTNTVECKDRPHKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPFQFSVSESKNSSKMG