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CmoCh02G012630 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G012630
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionLipoxygenase
Genome locationCmo_Chr02:7551971..7552330
RNA-Seq ExpressionCmoCh02G012630
SyntenyCmoCh02G012630
Gene Ontology termsGO:0006633 - fatty acid biosynthetic process (biological process)
GO:0031408 - oxylipin biosynthetic process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605891.1 Linoleate 13S-lipoxygenase 2-1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]4.4e-4592.17Show/hide
Query:  MLKSQGVGCSTRLAPATLCPLQRPSLGRGINAGVSFPFWNNSQNKQKAKSISNGRPRLVSREIKAALTTVAEPTTTVLTKVIVKKITGEITSSTLFMESK
        MLKSQGVGC+TR+APATLC LQRP L RGINAGVSFPFWNN+QNKQKAKSISNGR RLVSREIKAALTTVAEPTTTVLTKVIVKKITGEITSSTL MESK
Subjt:  MLKSQGVGCSTRLAPATLCPLQRPSLGRGINAGVSFPFWNNSQNKQKAKSISNGRPRLVSREIKAALTTVAEPTTTVLTKVIVKKITGEITSSTLFMESK

Query:  ALDKLLKLEFASIFV
        ALDKLLKLEFASI V
Subjt:  ALDKLLKLEFASIFV

KAG7035835.1 Linoleate 13S-lipoxygenase 2-1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]4.4e-4592.17Show/hide
Query:  MLKSQGVGCSTRLAPATLCPLQRPSLGRGINAGVSFPFWNNSQNKQKAKSISNGRPRLVSREIKAALTTVAEPTTTVLTKVIVKKITGEITSSTLFMESK
        MLKSQGVGC+TR+APATLC LQRP L RGINAGVSFPFWNN+QNKQKAKSISNGR RLVSREIKAALTTVAEPTTTVLTKVIVKKITGEITSSTL MESK
Subjt:  MLKSQGVGCSTRLAPATLCPLQRPSLGRGINAGVSFPFWNNSQNKQKAKSISNGRPRLVSREIKAALTTVAEPTTTVLTKVIVKKITGEITSSTLFMESK

Query:  ALDKLLKLEFASIFV
        ALDKLLKLEFASI V
Subjt:  ALDKLLKLEFASIFV

XP_022958148.1 linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Cucurbita moschata]3.6e-4793.91Show/hide
Query:  MLKSQGVGCSTRLAPATLCPLQRPSLGRGINAGVSFPFWNNSQNKQKAKSISNGRPRLVSREIKAALTTVAEPTTTVLTKVIVKKITGEITSSTLFMESK
        MLKSQGVGCSTR+APATLC LQRPSLGRGINAGVSFPFWNN  NKQKAKSISNGR RLVSREIKAALTTVAEPTTTVLTKVIVKKITGEITSSTL MESK
Subjt:  MLKSQGVGCSTRLAPATLCPLQRPSLGRGINAGVSFPFWNNSQNKQKAKSISNGRPRLVSREIKAALTTVAEPTTTVLTKVIVKKITGEITSSTLFMESK

Query:  ALDKLLKLEFASIFV
        ALDKLLKLEFASI V
Subjt:  ALDKLLKLEFASIFV

XP_022995022.1 linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Cucurbita maxima]1.8e-4693.04Show/hide
Query:  MLKSQGVGCSTRLAPATLCPLQRPSLGRGINAGVSFPFWNNSQNKQKAKSISNGRPRLVSREIKAALTTVAEPTTTVLTKVIVKKITGEITSSTLFMESK
        MLKSQGVGCSTR+APATLC LQRP LGRGINAGVSFPFWNN  NKQKAKSISNGR RLVSREIKAALTTVAEPTTTVLTKVIVKKITGEITSSTL MESK
Subjt:  MLKSQGVGCSTRLAPATLCPLQRPSLGRGINAGVSFPFWNNSQNKQKAKSISNGRPRLVSREIKAALTTVAEPTTTVLTKVIVKKITGEITSSTLFMESK

Query:  ALDKLLKLEFASIFV
        ALDKLLKLEFASI V
Subjt:  ALDKLLKLEFASIFV

XP_023532782.1 linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Cucurbita pepo subsp. pepo]4.4e-4592.17Show/hide
Query:  MLKSQGVGCSTRLAPATLCPLQRPSLGRGINAGVSFPFWNNSQNKQKAKSISNGRPRLVSREIKAALTTVAEPTTTVLTKVIVKKITGEITSSTLFMESK
        MLKSQGVGC+TR+APATLC LQRP L RGINAGVSFPFWNN+QNKQKAKSISNGR RLVSREIKAALTTVAEPTTTVLTKVIVKKITGEITSSTL MESK
Subjt:  MLKSQGVGCSTRLAPATLCPLQRPSLGRGINAGVSFPFWNNSQNKQKAKSISNGRPRLVSREIKAALTTVAEPTTTVLTKVIVKKITGEITSSTLFMESK

Query:  ALDKLLKLEFASIFV
        ALDKLLKLEFASI V
Subjt:  ALDKLLKLEFASIFV

TrEMBL top hitse value%identityAlignment
A0A6J1D3N9 Lipoxygenase1.7e-1858.12Show/hide
Query:  MLKSQGVGCST-RLAPATLCPLQRPSLGRGINAGVSF-PFWN--NSQNKQKAKSISNGRPRLVSREIKAALTTVAEPTTTVLTKVIVKKITGEITSSTLF
        MLK QG GCST   APA+L  LQRP L    NAG +F P ++  + Q ++ +KS  NGR RLV REIKAA+ T AEPTTTV TKV+V+K+TGEITSST+ 
Subjt:  MLKSQGVGCST-RLAPATLCPLQRPSLGRGINAGVSF-PFWN--NSQNKQKAKSISNGRPRLVSREIKAALTTVAEPTTTVLTKVIVKKITGEITSSTLF

Query:  MESKA-LDKLLKLEFAS
         + K  ++K LKLEFAS
Subjt:  MESKA-LDKLLKLEFAS

A0A6J1DHR2 Lipoxygenase3.9e-2364.66Show/hide
Query:  MLKSQGVGCSTR-LAPATLCPLQRPSLGRGINAGVSF-PFWNNS--QNKQKAKSISNGRPRLVSREIKAALTTVAEPTTTVLTKVIVKKITGEITSSTLF
        MLK QG GCS R  APA+L  LQRP L   INAG +F P ++NS  Q ++ +KS  NGR RLV REIKAAL T AEPTTTV TKV+VKKITGEITSSTL 
Subjt:  MLKSQGVGCSTR-LAPATLCPLQRPSLGRGINAGVSF-PFWNNS--QNKQKAKSISNGRPRLVSREIKAALTTVAEPTTTVLTKVIVKKITGEITSSTLF

Query:  MESKALDKLLKLEFAS
         ++K ++K LKLEFAS
Subjt:  MESKALDKLLKLEFAS

A0A6J1DLP5 Lipoxygenase1.6e-1354.7Show/hide
Query:  MLKSQGV-GCSTRLAPATLCPLQRPSLGRGINAGVSF--PFWNNSQNKQKAKSISNGRPRLV-SREIKAALTTVAEPTTTVLTKVIVKKITGEITSSTLF
        MLK QG  GC+   APA+L  +QRPSL   I+A  +F  P+WN S  KQK+   SNGR  LV  REIKA L+T A+PTT+V TKV+VKKITG  TSS   
Subjt:  MLKSQGV-GCSTRLAPATLCPLQRPSLGRGINAGVSF--PFWNNSQNKQKAKSISNGRPRLV-SREIKAALTTVAEPTTTVLTKVIVKKITGEITSSTLF

Query:  MESK-ALDKLLKLEFAS
         + K  ++K LKL+FAS
Subjt:  MESK-ALDKLLKLEFAS

A0A6J1H2B7 Lipoxygenase1.7e-4793.91Show/hide
Query:  MLKSQGVGCSTRLAPATLCPLQRPSLGRGINAGVSFPFWNNSQNKQKAKSISNGRPRLVSREIKAALTTVAEPTTTVLTKVIVKKITGEITSSTLFMESK
        MLKSQGVGCSTR+APATLC LQRPSLGRGINAGVSFPFWNN  NKQKAKSISNGR RLVSREIKAALTTVAEPTTTVLTKVIVKKITGEITSSTL MESK
Subjt:  MLKSQGVGCSTRLAPATLCPLQRPSLGRGINAGVSFPFWNNSQNKQKAKSISNGRPRLVSREIKAALTTVAEPTTTVLTKVIVKKITGEITSSTLFMESK

Query:  ALDKLLKLEFASIFV
        ALDKLLKLEFASI V
Subjt:  ALDKLLKLEFASIFV

A0A6J1JXK9 Lipoxygenase8.6e-4793.04Show/hide
Query:  MLKSQGVGCSTRLAPATLCPLQRPSLGRGINAGVSFPFWNNSQNKQKAKSISNGRPRLVSREIKAALTTVAEPTTTVLTKVIVKKITGEITSSTLFMESK
        MLKSQGVGCSTR+APATLC LQRP LGRGINAGVSFPFWNN  NKQKAKSISNGR RLVSREIKAALTTVAEPTTTVLTKVIVKKITGEITSSTL MESK
Subjt:  MLKSQGVGCSTRLAPATLCPLQRPSLGRGINAGVSFPFWNNSQNKQKAKSISNGRPRLVSREIKAALTTVAEPTTTVLTKVIVKKITGEITSSTLFMESK

Query:  ALDKLLKLEFASIFV
        ALDKLLKLEFASI V
Subjt:  ALDKLLKLEFASIFV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAAATCTCAAGGCGTTGGGTGTTCTACACGATTGGCTCCGGCGACCCTCTGCCCTTTGCAGAGGCCATCATTGGGTCGTGGCATCAACGCCGGAGTTTCTTTTCC
TTTTTGGAACAATTCCCAGAACAAGCAGAAGGCCAAGAGCATCAGCAATGGCCGCCCTAGACTCGTGTCCCGTGAAATCAAAGCAGCCTTGACCACTGTCGCCGAACCCA
CCACCACCGTCCTCACAAAAGTCATTGTCAAGAAGATCACTGGAGAAATCACTTCGTCCACACTTTTCATGGAAAGCAAGGCCCTCGATAAGTTGCTCAAACTCGAGTTC
GCCAGCATCTTCGTCATCGTTTATGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGAAATCTCAAGGCGTTGGGTGTTCTACACGATTGGCTCCGGCGACCCTCTGCCCTTTGCAGAGGCCATCATTGGGTCGTGGCATCAACGCCGGAGTTTCTTTTCC
TTTTTGGAACAATTCCCAGAACAAGCAGAAGGCCAAGAGCATCAGCAATGGCCGCCCTAGACTCGTGTCCCGTGAAATCAAAGCAGCCTTGACCACTGTCGCCGAACCCA
CCACCACCGTCCTCACAAAAGTCATTGTCAAGAAGATCACTGGAGAAATCACTTCGTCCACACTTTTCATGGAAAGCAAGGCCCTCGATAAGTTGCTCAAACTCGAGTTC
GCCAGCATCTTCGTCATCGTTTATGCATGA
Protein sequenceShow/hide protein sequence
MLKSQGVGCSTRLAPATLCPLQRPSLGRGINAGVSFPFWNNSQNKQKAKSISNGRPRLVSREIKAALTTVAEPTTTVLTKVIVKKITGEITSSTLFMESKALDKLLKLEF
ASIFVIVYA