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CmoCh02G012720 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G012720
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr02:7586561..7587195
RNA-Seq ExpressionCmoCh02G012720
SyntenyCmoCh02G012720
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB2027992.1 hypothetical protein ES319_D05G069900v1 [Gossypium barbadense]3.6e-0638.98Show/hide
Query:  LSKARLNILIFPKFRGNVPEILLFRRSKCIKFGSAVSEAGIEPEIKLSATLSTERQRSYTPRNLTGDSLPVSNDNAGET-----SKLADGRRNIPGHKTS
        L+KARLNIL  P   G  PEILLF +SKCIKF   V+E GI P+  LSAT  T R+           +LP+S   + E+     S++    R +     S
Subjt:  LSKARLNILIFPKFRGNVPEILLFRRSKCIKFGSAVSEAGIEPEIKLSATLSTERQRSYTPRNLTGDSLPVSNDNAGET-----SKLADGRRNIPGHKTS

Query:  TVSPFENRILRFAPEVNI
         V PF++ I+R    V++
Subjt:  TVSPFENRILRFAPEVNI

KAF5445853.1 hypothetical protein F2P56_031535 [Juglans regia]1.5e-0752.11Show/hide
Query:  MEAGRGPEIWFRLSKARLNILIFPKFRGNVPEILLFRRSKCIKFGSAVSEAGIEPEIKLSATLSTERQRSY
        M+AG  P  WF LS ARL++  FPK  G  PEI L  RS+CI   S  S+AGI PEI LSA L T  + S+
Subjt:  MEAGRGPEIWFRLSKARLNILIFPKFRGNVPEILLFRRSKCIKFGSAVSEAGIEPEIKLSATLSTERQRSY

KAF5447831.1 hypothetical protein F2P56_033351 [Juglans regia]1.1e-1845Show/hide
Query:  STERQRSYTPRNLTGDSLPVSNDNAGETSKLADGRRNIPGHKTSTVSPFENRILRFAPEVNIGNPVSHWVTANAVPSVATVVSGPGIKDPQIGLLKGSSE
        S +R+    P +L GDSLP+ NDN GE  + ADG  ++PGH T +V P E+ +L  + E ++G+P    V A+A+P VATV +GP ++D Q+GL++   E
Subjt:  STERQRSYTPRNLTGDSLPVSNDNAGETSKLADGRRNIPGHKTSTVSPFENRILRFAPEVNIGNPVSHWVTANAVPSVATVVSGPGIKDPQIGLLKGSSE

Query:  SQKSCPFRRRAAMN-RRANG
         Q+ CP RRRA +N  R+NG
Subjt:  SQKSCPFRRRAAMN-RRANG

KAG4955548.1 hypothetical protein JHK85_041928 [Glycine max]4.4e-1241.96Show/hide
Query:  RNLTGDSLPVSNDNAGETSKLADGRRNIPGHKTSTVSPFENRILRFAPEVNIGNPVSHWVTANAVPSVATVVSGPGIKDPQIGLLKGSSESQKSCPFRRR
        R+L G S PV + +AGET +LAD RR++ GH    V   E+R+LR A EV++G+     V A+AVP +A V +GPG++D +IGL++         P RRR
Subjt:  RNLTGDSLPVSNDNAGETSKLADGRRNIPGHKTSTVSPFENRILRFAPEVNIGNPVSHWVTANAVPSVATVVSGPGIKDPQIGLLKGSSESQKSCPFRRR

Query:  AAMNRRANGQNQ
          ++  A G N+
Subjt:  AAMNRRANGQNQ

KAG6630218.1 hypothetical protein CIPAW_13G003100 [Carya illinoinensis]8.7e-0852.11Show/hide
Query:  MEAGRGPEIWFRLSKARLNILIFPKFRGNVPEILLFRRSKCIKFGSAVSEAGIEPEIKLSATLSTERQRSY
        M+AG  P  WF LS+ARL++  FPK  G  PEI L  RS+CI   S  S+AGI PEI LSA L T  + S+
Subjt:  MEAGRGPEIWFRLSKARLNILIFPKFRGNVPEILLFRRSKCIKFGSAVSEAGIEPEIKLSATLSTERQRSY

TrEMBL top hitse value%identityAlignment
A0A0R0G3M2 Uncharacterized protein2.2e-1241.96Show/hide
Query:  RNLTGDSLPVSNDNAGETSKLADGRRNIPGHKTSTVSPFENRILRFAPEVNIGNPVSHWVTANAVPSVATVVSGPGIKDPQIGLLKGSSESQKSCPFRRR
        R+L G S PV + +AGET +LAD RR++ GH    V   E+R+LR A EV++G+     V A+AVP +A V +GPG++D +IGL++         P RRR
Subjt:  RNLTGDSLPVSNDNAGETSKLADGRRNIPGHKTSTVSPFENRILRFAPEVNIGNPVSHWVTANAVPSVATVVSGPGIKDPQIGLLKGSSESQKSCPFRRR

Query:  AAMNRRANGQNQ
          ++  A G N+
Subjt:  AAMNRRANGQNQ

A0A2P5EUL8 Uncharacterized protein3.9e-0644.29Show/hide
Query:  DSLPVSNDNAGETSKLADGRRNIPGHKTSTVSPFENRILRFAPEVNIGNPVSHWVTANAVPSVATVVSGP
        D+LPV + +A E  + ADG  ++PGH   +V P ENR+L  + EV++ +P    V A+AVP VA V  GP
Subjt:  DSLPVSNDNAGETSKLADGRRNIPGHKTSTVSPFENRILRFAPEVNIGNPVSHWVTANAVPSVATVVSGP

A0A5D2CCV0 Uncharacterized protein1.8e-0638.98Show/hide
Query:  LSKARLNILIFPKFRGNVPEILLFRRSKCIKFGSAVSEAGIEPEIKLSATLSTERQRSYTPRNLTGDSLPVSNDNAGET-----SKLADGRRNIPGHKTS
        L+KARLNIL  P   G  PEILLF +SKCIKF   V+E GI P+  LSAT  T R+           +LP+S   + E+     S++    R +     S
Subjt:  LSKARLNILIFPKFRGNVPEILLFRRSKCIKFGSAVSEAGIEPEIKLSATLSTERQRSYTPRNLTGDSLPVSNDNAGET-----SKLADGRRNIPGHKTS

Query:  TVSPFENRILRFAPEVNI
         V PF++ I+R    V++
Subjt:  TVSPFENRILRFAPEVNI

A0A5D2KSY4 Uncharacterized protein2.3e-0638.98Show/hide
Query:  LSKARLNILIFPKFRGNVPEILLFRRSKCIKFGSAVSEAGIEPEIKLSATLSTERQRSYTPRNLTGDSLPVSNDNAGET-----SKLADGRRNIPGHKTS
        L+KARLNIL  P   G  PEILLF +SKCIKF   V+E GI P+  LSAT  T R+           +LP+S   + E+     S++    R +     S
Subjt:  LSKARLNILIFPKFRGNVPEILLFRRSKCIKFGSAVSEAGIEPEIKLSATLSTERQRSYTPRNLTGDSLPVSNDNAGET-----SKLADGRRNIPGHKTS

Query:  TVSPFENRILRFAPEVNI
         V PF++ I+R    V++
Subjt:  TVSPFENRILRFAPEVNI

A0A5J5R983 Uncharacterized protein1.8e-0638.98Show/hide
Query:  LSKARLNILIFPKFRGNVPEILLFRRSKCIKFGSAVSEAGIEPEIKLSATLSTERQRSYTPRNLTGDSLPVSNDNAGET-----SKLADGRRNIPGHKTS
        L+KARLNIL  P   G  PEILLF +SKCIKF   V+E GI P+  LSAT  T R+           +LP+S   + E+     S++    R +     S
Subjt:  LSKARLNILIFPKFRGNVPEILLFRRSKCIKFGSAVSEAGIEPEIKLSATLSTERQRSYTPRNLTGDSLPVSNDNAGET-----SKLADGRRNIPGHKTS

Query:  TVSPFENRILRFAPEVNI
         V PF++ I+R    V++
Subjt:  TVSPFENRILRFAPEVNI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCGGGAAGAGGACCGGAGATCTGGTTCCGGCTCAGCAAAGCCCGGCTCAACATCCTCATATTCCCGAAATTTCGGGGTAACGTTCCGGAAATTTTGTTGTTTCG
GAGGTCCAAATGCATCAAGTTCGGAAGCGCCGTAAGCGAAGCCGGAATTGAACCGGAAATCAAATTATCCGCCACGTTGAGCACCGAACGGCAACGAAGTTATACACCTC
GGAATCTCACCGGTGATTCCCTTCCAGTCAGCAATGATAACGCTGGAGAGACGAGTAAGCTTGCAGATGGCCGGAGAAATATACCCGGTCATAAAACCAGTACGGTGAGC
CCGTTCGAAAATCGGATCCTCAGATTCGCCCCGGAGGTTAATATCGGCAACCCGGTGAGTCACTGGGTCACAGCTAACGCCGTACCATCGGTTGCAACAGTCGTCTCCGG
TCCAGGAATTAAAGATCCCCAAATAGGGCTCCTTAAGGGCAGCTCTGAAAGCCAGAAGAGCTGCCCGTTCCGAAGGCGGGCAGCCATGAACCGCCGAGCCAACGGCCAAA
ACCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCGGGAAGAGGACCGGAGATCTGGTTCCGGCTCAGCAAAGCCCGGCTCAACATCCTCATATTCCCGAAATTTCGGGGTAACGTTCCGGAAATTTTGTTGTTTCG
GAGGTCCAAATGCATCAAGTTCGGAAGCGCCGTAAGCGAAGCCGGAATTGAACCGGAAATCAAATTATCCGCCACGTTGAGCACCGAACGGCAACGAAGTTATACACCTC
GGAATCTCACCGGTGATTCCCTTCCAGTCAGCAATGATAACGCTGGAGAGACGAGTAAGCTTGCAGATGGCCGGAGAAATATACCCGGTCATAAAACCAGTACGGTGAGC
CCGTTCGAAAATCGGATCCTCAGATTCGCCCCGGAGGTTAATATCGGCAACCCGGTGAGTCACTGGGTCACAGCTAACGCCGTACCATCGGTTGCAACAGTCGTCTCCGG
TCCAGGAATTAAAGATCCCCAAATAGGGCTCCTTAAGGGCAGCTCTGAAAGCCAGAAGAGCTGCCCGTTCCGAAGGCGGGCAGCCATGAACCGCCGAGCCAACGGCCAAA
ACCAGTAA
Protein sequenceShow/hide protein sequence
MEAGRGPEIWFRLSKARLNILIFPKFRGNVPEILLFRRSKCIKFGSAVSEAGIEPEIKLSATLSTERQRSYTPRNLTGDSLPVSNDNAGETSKLADGRRNIPGHKTSTVS
PFENRILRFAPEVNIGNPVSHWVTANAVPSVATVVSGPGIKDPQIGLLKGSSESQKSCPFRRRAAMNRRANGQNQ