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CmoCh02G012920 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G012920
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptioncyclin-dependent protein kinase inhibitor SMR13-like
Genome locationCmo_Chr02:7691061..7691381
RNA-Seq ExpressionCmoCh02G012920
SyntenyCmoCh02G012920
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
GO:0045839 - negative regulation of mitotic nuclear division (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605917.1 Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma subsp. sororia]2.6e-4994.59Show/hide
Query:  MATRPRRNIRTSKVNKKIKKTTTKK---PQNQIPPPQNDVVQFPDDD--GGGGYSTPKAERFRIPEILTCPPGPKKQRPISDCSFRRSPIAFFAPPELEL
        MATRPRRNIRTSK+NKKIKKTTTKK   PQNQIPPPQNDVVQFPDDD  GGGGYSTPKAERFRIPEILTCPPGPKKQRPISDCSFRRSPIAFFAPPELEL
Subjt:  MATRPRRNIRTSKVNKKIKKTTTKK---PQNQIPPPQNDVVQFPDDD--GGGGYSTPKAERFRIPEILTCPPGPKKQRPISDCSFRRSPIAFFAPPELEL

Query:  FFFIARPDISV
        FFFIARPDISV
Subjt:  FFFIARPDISV

KAG7035865.1 Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma subsp. argyrosperma]5.8e-4992.11Show/hide
Query:  MATRPRRNIRTSKVNKKIKKTTTKK---PQNQIPPPQNDVVQFPDDD-----GGGGYSTPKAERFRIPEILTCPPGPKKQRPISDCSFRRSPIAFFAPPE
        MATRPRRNIRTSK+NKKIKKTTTKK   PQNQIPPPQNDVVQFPDDD     GGGGYSTPKAERFRIPEILTCPPGPKKQRPISDCSFRRSPIAFFAPPE
Subjt:  MATRPRRNIRTSKVNKKIKKTTTKK---PQNQIPPPQNDVVQFPDDD-----GGGGYSTPKAERFRIPEILTCPPGPKKQRPISDCSFRRSPIAFFAPPE

Query:  LELFFFIARPDISV
        LELFFFIARPDISV
Subjt:  LELFFFIARPDISV

XP_022958378.1 cyclin-dependent protein kinase inhibitor SMR13-like [Cucurbita moschata]8.7e-53100Show/hide
Query:  MATRPRRNIRTSKVNKKIKKTTTKKPQNQIPPPQNDVVQFPDDDGGGGYSTPKAERFRIPEILTCPPGPKKQRPISDCSFRRSPIAFFAPPELELFFFIA
        MATRPRRNIRTSKVNKKIKKTTTKKPQNQIPPPQNDVVQFPDDDGGGGYSTPKAERFRIPEILTCPPGPKKQRPISDCSFRRSPIAFFAPPELELFFFIA
Subjt:  MATRPRRNIRTSKVNKKIKKTTTKKPQNQIPPPQNDVVQFPDDDGGGGYSTPKAERFRIPEILTCPPGPKKQRPISDCSFRRSPIAFFAPPELELFFFIA

Query:  RPDISV
        RPDISV
Subjt:  RPDISV

XP_022996084.1 cyclin-dependent protein kinase inhibitor SMR9-like [Cucurbita maxima]1.0e-4586.84Show/hide
Query:  MATRPRRNIRTSKVNKKIKKTTTKK---PQNQIPPPQNDVVQFPD-----DDGGGGYSTPKAERFRIPEILTCPPGPKKQRPISDCSFRRSPIAFFAPPE
        MATRPRRNI  SK+NKK+KKTTTKK   PQNQIPPPQNDVVQFPD     DD GGGYSTPKAERFRIPEILTCPPGPKKQRP+SDCSFRRSPIAFFAPPE
Subjt:  MATRPRRNIRTSKVNKKIKKTTTKK---PQNQIPPPQNDVVQFPD-----DDGGGGYSTPKAERFRIPEILTCPPGPKKQRPISDCSFRRSPIAFFAPPE

Query:  LELFFFIARPDISV
        LELFFFI+RPDISV
Subjt:  LELFFFIARPDISV

XP_023532997.1 cyclin-dependent protein kinase inhibitor SMR13-like [Cucurbita pepo subsp. pepo]7.6e-4995.41Show/hide
Query:  MATRPRRNIRTSKVNKKIKKTTTKK---PQNQIPPPQNDVVQFPDDDGGGGYSTPKAERFRIPEILTCPPGPKKQRPISDCSFRRSPIAFFAPPELELFF
        MATRPRRNIRTSK+NKKIKKTTTKK   PQNQIPPPQNDVVQFPDDD GGGYSTPKAERFRIPEILTCPPGPKKQRPISDCSFRRSPIAFFAPPELELFF
Subjt:  MATRPRRNIRTSKVNKKIKKTTTKK---PQNQIPPPQNDVVQFPDDDGGGGYSTPKAERFRIPEILTCPPGPKKQRPISDCSFRRSPIAFFAPPELELFF

Query:  FIARPDISV
        FIARPDISV
Subjt:  FIARPDISV

TrEMBL top hitse value%identityAlignment
A0A0A0L0Q1 Uncharacterized protein1.8e-2765.79Show/hide
Query:  MATR-PRRNIRTSKVNKKIKKTTTKKPQNQ-----IPPPQNDVVQFPDDDGGGGYSTPKAERFRIPEILTCPPGPKKQRPISDCSFRRSPIAFFAPPELE
        MATR  RR +   K+ KKIKKTT KK   Q     +P  QND+V+F D+   GG STPKAER RIPEILTCPP PKK R +SDCS RRSPIAFFAPPELE
Subjt:  MATR-PRRNIRTSKVNKKIKKTTTKKPQNQ-----IPPPQNDVVQFPDDDGGGGYSTPKAERFRIPEILTCPPGPKKQRPISDCSFRRSPIAFFAPPELE

Query:  LFFFIAR--PDISV
        LFFF+A   PDISV
Subjt:  LFFFIAR--PDISV

A0A6J1D3Z6 cyclin-dependent protein kinase inhibitor SMR15-like9.4e-2968.52Show/hide
Query:  MATRPRRNIRTSKVNKKIKKTTTKKPQNQIPPP--QNDVVQFPDDDGGGGYSTPKAERFRIPEILTCPPGPKKQRPISDCSFRRSPIAFFAPPELELFFF
        MA R R N ++ K+ KK+KK T K+ Q ++P P  +NDVVQ  +DD  GG STP+AERFRIPEI+TCPP PKKQRP+SDCSFRRSPIAFFAPPELELFFF
Subjt:  MATRPRRNIRTSKVNKKIKKTTTKKPQNQIPPP--QNDVVQFPDDDGGGGYSTPKAERFRIPEILTCPPGPKKQRPISDCSFRRSPIAFFAPPELELFFF

Query:  IARPDISV
         A PDI V
Subjt:  IARPDISV

A0A6J1H2X7 cyclin-dependent protein kinase inhibitor SMR13-like4.2e-53100Show/hide
Query:  MATRPRRNIRTSKVNKKIKKTTTKKPQNQIPPPQNDVVQFPDDDGGGGYSTPKAERFRIPEILTCPPGPKKQRPISDCSFRRSPIAFFAPPELELFFFIA
        MATRPRRNIRTSKVNKKIKKTTTKKPQNQIPPPQNDVVQFPDDDGGGGYSTPKAERFRIPEILTCPPGPKKQRPISDCSFRRSPIAFFAPPELELFFFIA
Subjt:  MATRPRRNIRTSKVNKKIKKTTTKKPQNQIPPPQNDVVQFPDDDGGGGYSTPKAERFRIPEILTCPPGPKKQRPISDCSFRRSPIAFFAPPELELFFFIA

Query:  RPDISV
        RPDISV
Subjt:  RPDISV

A0A6J1JET4 cyclin-dependent protein kinase inhibitor SMR137.5e-2665.22Show/hide
Query:  MATRPRRNIRTSKVNKKIKKTTTKKPQNQIPPPQ------NDVVQFPDD--DGGGGYSTPKAERFRIPEILTCPPGPKKQRPISDCSFRRSPIAFFAPPE
        MATR R N+   K+NKKIKKT  ++ Q Q    Q      ND V F DD  D  GG STPKAERFRIPEILTCPP PKK RP SDCS RRSPIAFFAPPE
Subjt:  MATRPRRNIRTSKVNKKIKKTTTKKPQNQIPPPQ------NDVVQFPDD--DGGGGYSTPKAERFRIPEILTCPPGPKKQRPISDCSFRRSPIAFFAPPE

Query:  LELFF-FIARPDISV
        LELFF  +  PDISV
Subjt:  LELFF-FIARPDISV

A0A6J1K7R4 cyclin-dependent protein kinase inhibitor SMR9-like5.0e-4686.84Show/hide
Query:  MATRPRRNIRTSKVNKKIKKTTTKK---PQNQIPPPQNDVVQFPD-----DDGGGGYSTPKAERFRIPEILTCPPGPKKQRPISDCSFRRSPIAFFAPPE
        MATRPRRNI  SK+NKK+KKTTTKK   PQNQIPPPQNDVVQFPD     DD GGGYSTPKAERFRIPEILTCPPGPKKQRP+SDCSFRRSPIAFFAPPE
Subjt:  MATRPRRNIRTSKVNKKIKKTTTKK---PQNQIPPPQNDVVQFPD-----DDGGGGYSTPKAERFRIPEILTCPPGPKKQRPISDCSFRRSPIAFFAPPE

Query:  LELFFFIARPDISV
        LELFFFI+RPDISV
Subjt:  LELFFFIARPDISV

SwissProt top hitse value%identityAlignment
F4IWB3 Cyclin-dependent protein kinase inhibitor SMR132.0e-1243.88Show/hide
Query:  RTSKVNKKIKKTTTKKPQNQIPPPQ----NDVVQFPDDD------GGGGYSTPKAERFRIPEILTCPPGPKKQRPISDCSFRRSPIAFFAPPELELFF
        +  K N+  KK T    + Q+P       N +   P           GG  TPKA++ RIPE+LTCPP PKKQR   +C  RR  I FFAPPE+ELFF
Subjt:  RTSKVNKKIKKTTTKKPQNQIPPPQ----NDVVQFPDDD------GGGGYSTPKAERFRIPEILTCPPGPKKQRPISDCSFRRSPIAFFAPPELELFF

Q1G3Y4 Cyclin-dependent protein kinase inhibitor SMR151.6e-0443.75Show/hide
Query:  STPKAERFRIPEILTCPPGPKKQRPISDCSFRRSPIAFFAPPELELFF
        +TP A+  RIP ++ CPP PKK++     S+   P  FF+PP+LE  F
Subjt:  STPKAERFRIPEILTCPPGPKKQRPISDCSFRRSPIAFFAPPELELFF

Q29Q81 Cyclin-dependent protein kinase inhibitor SMR64.5e-0445.45Show/hide
Query:  STPKAERFRIPEILTCPPGPKKQRPISDCSFRRSPIA--FFAPP-ELELFFFIAR
        +TP A+  +IPE+L CPP P+K+RP   C   RS +   FF PP +LE  F   R
Subjt:  STPKAERFRIPEILTCPPGPKKQRPISDCSFRRSPIA--FFAPP-ELELFFFIAR

Q3ECS5 Cyclin-dependent protein kinase inhibitor SMR95.0e-1160.38Show/hide
Query:  GYSTPKAERFRIPEILTCPPGPKKQRPISDCSFRRSPIAFFAPPELELFFFIA
        G  TP  E+ RIPE+LTCPP PKKQ+   +C+ RR  IAFFAPP++ELFF  A
Subjt:  GYSTPKAERFRIPEILTCPPGPKKQRPISDCSFRRSPIAFFAPPELELFFFIA

Q9SAD3 Cyclin-dependent protein kinase inhibitor SMR82.7e-0441.67Show/hide
Query:  STPKAERFRIPEILTCPPGPKKQRPISDCSFRRSPIAFFAPPELELFF
        +TP A   RIP +  CP  PKK++P   CS+      +F+PP+LE  F
Subjt:  STPKAERFRIPEILTCPPGPKKQRPISDCSFRRSPIAFFAPPELELFF

Arabidopsis top hitse value%identityAlignment
AT1G10690.1 unknown protein1.9e-0541.67Show/hide
Query:  STPKAERFRIPEILTCPPGPKKQRPISDCSFRRSPIAFFAPPELELFF
        +TP A   RIP +  CP  PKK++P   CS+      +F+PP+LE  F
Subjt:  STPKAERFRIPEILTCPPGPKKQRPISDCSFRRSPIAFFAPPELELFF

AT1G51355.1 unknown protein3.5e-1260.38Show/hide
Query:  GYSTPKAERFRIPEILTCPPGPKKQRPISDCSFRRSPIAFFAPPELELFFFIA
        G  TP  E+ RIPE+LTCPP PKKQ+   +C+ RR  IAFFAPP++ELFF  A
Subjt:  GYSTPKAERFRIPEILTCPPGPKKQRPISDCSFRRSPIAFFAPPELELFFFIA

AT1G60783.1 unknown protein1.1e-0543.75Show/hide
Query:  STPKAERFRIPEILTCPPGPKKQRPISDCSFRRSPIAFFAPPELELFF
        +TP A+  RIP ++ CPP PKK++     S+   P  FF+PP+LE  F
Subjt:  STPKAERFRIPEILTCPPGPKKQRPISDCSFRRSPIAFFAPPELELFF

AT3G20898.1 unknown protein1.4e-1343.88Show/hide
Query:  RTSKVNKKIKKTTTKKPQNQIPPPQ----NDVVQFPDDD------GGGGYSTPKAERFRIPEILTCPPGPKKQRPISDCSFRRSPIAFFAPPELELFF
        +  K N+  KK T    + Q+P       N +   P           GG  TPKA++ RIPE+LTCPP PKKQR   +C  RR  I FFAPPE+ELFF
Subjt:  RTSKVNKKIKKTTTKKPQNQIPPPQ----NDVVQFPDDD------GGGGYSTPKAERFRIPEILTCPPGPKKQRPISDCSFRRSPIAFFAPPELELFF

AT5G40460.1 unknown protein3.2e-0545.45Show/hide
Query:  STPKAERFRIPEILTCPPGPKKQRPISDCSFRRSPIA--FFAPP-ELELFFFIAR
        +TP A+  +IPE+L CPP P+K+RP   C   RS +   FF PP +LE  F   R
Subjt:  STPKAERFRIPEILTCPPGPKKQRPISDCSFRRSPIA--FFAPP-ELELFFFIAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACAAGACCCAGAAGAAATATACGCACCTCCAAGGTGAATAAGAAAATCAAGAAGACAACCACGAAGAAGCCACAGAACCAGATTCCGCCGCCACAGAACGACGT
TGTTCAATTTCCTGACGACGACGGCGGCGGCGGCTACAGCACGCCAAAAGCAGAGAGATTCAGAATCCCGGAGATTCTGACATGTCCACCGGGGCCGAAAAAGCAAAGAC
CCATCTCCGATTGTTCCTTCCGGCGATCGCCAATTGCCTTTTTTGCCCCTCCAGAATTAGAGCTCTTCTTCTTCATCGCCCGACCGGACATTTCAGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGACAAGACCCAGAAGAAATATACGCACCTCCAAGGTGAATAAGAAAATCAAGAAGACAACCACGAAGAAGCCACAGAACCAGATTCCGCCGCCACAGAACGACGT
TGTTCAATTTCCTGACGACGACGGCGGCGGCGGCTACAGCACGCCAAAAGCAGAGAGATTCAGAATCCCGGAGATTCTGACATGTCCACCGGGGCCGAAAAAGCAAAGAC
CCATCTCCGATTGTTCCTTCCGGCGATCGCCAATTGCCTTTTTTGCCCCTCCAGAATTAGAGCTCTTCTTCTTCATCGCCCGACCGGACATTTCAGTTTGA
Protein sequenceShow/hide protein sequence
MATRPRRNIRTSKVNKKIKKTTTKKPQNQIPPPQNDVVQFPDDDGGGGYSTPKAERFRIPEILTCPPGPKKQRPISDCSFRRSPIAFFAPPELELFFFIARPDISV