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CmoCh02G013520 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G013520
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionProtein GL2-INTERACTING REPRESSOR 1
Genome locationCmo_Chr02:8048880..8049200
RNA-Seq ExpressionCmoCh02G013520
SyntenyCmoCh02G013520
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570472.1 NAC domain-containing protein 40, partial [Cucurbita argyrosperma subsp. sororia]3.7e-2766.06Show/hide
Query:  MSKRPRSSETEVALRVDMNRSPTTSSMSMFGGSESGLGSDVSVESSCLSLWDGEVEEDEMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFF-
        MSKR RSSE +V LRV++NR P+ ++ S+ G   SG  SD+SVE+SCL  W+G VEE+  I+TRSMMLVGCPGCFMYVMLT+KSSQCPKC NNVFLDFF 
Subjt:  MSKRPRSSETEVALRVDMNRSPTTSSMSMFGGSESGLGSDVSVESSCLSLWDGEVEEDEMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFF-

Query:  ---DQQKHH
            QQ+HH
Subjt:  ---DQQKHH

KAG6605971.1 hypothetical protein SDJN03_03288, partial [Cucurbita argyrosperma subsp. sororia]2.8e-5199.06Show/hide
Query:  MSKRPRSSETEVALRVDMNRSPTTSSMSMFGGSESGLGSDVSVESSCLSLWDGEVEEDEMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFFD
        MSKRPRSSETEVALRVDMNRSPTTSSMSMFGGSESGLGSDVSVESSCLSLWDGEVEEDEMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFF+
Subjt:  MSKRPRSSETEVALRVDMNRSPTTSSMSMFGGSESGLGSDVSVESSCLSLWDGEVEEDEMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFFD

Query:  QQKHHA
        QQKHHA
Subjt:  QQKHHA

KAG7010337.1 hypothetical protein SDJN02_27130, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-2765.18Show/hide
Query:  MSKRPRSSETEVALRVDMNRSPTTSSMSMFGGSESGLGSDVSVESSCLSLWDGEVEEDEMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFF-
        MSKR RSSE +V LRV++NR P+ ++ S+ G   SG  SD+SVE+SCL  W+G VEE+  I+TRSMMLVGCPGCFMYVMLT+KSSQCPKC NNVFLDFF 
Subjt:  MSKRPRSSETEVALRVDMNRSPTTSSMSMFGGSESGLGSDVSVESSCLSLWDGEVEEDEMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFF-

Query:  -----DQQKHHA
              QQ+HHA
Subjt:  -----DQQKHHA

KAG7035922.1 hypothetical protein SDJN02_02722, partial [Cucurbita argyrosperma subsp. argyrosperma]2.8e-5199.06Show/hide
Query:  MSKRPRSSETEVALRVDMNRSPTTSSMSMFGGSESGLGSDVSVESSCLSLWDGEVEEDEMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFFD
        MSKRPRSSETEVALRVDMNRSPTTSSMSMFGGSESGLGSDVSVESSCLSLWDGEVEEDEMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFF+
Subjt:  MSKRPRSSETEVALRVDMNRSPTTSSMSMFGGSESGLGSDVSVESSCLSLWDGEVEEDEMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFFD

Query:  QQKHHA
        QQKHHA
Subjt:  QQKHHA

KGN48041.1 hypothetical protein Csa_002820 [Cucumis sativus]1.9e-2869.64Show/hide
Query:  MSKRPRSSETEVALRVDMNRSPT----TSSMSMFGGSESGLGSDVSVESSCLSLWDGEVEED--EMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNV
        MSKR RSSE EV LRV++NRSPT    +SS+S F GS SG  S++SV +SCLS  +GE      E I+TRSMMLVGCPGCFMYVMLT+KSSQCPKCKNNV
Subjt:  MSKRPRSSETEVALRVDMNRSPT----TSSMSMFGGSESGLGSDVSVESSCLSLWDGEVEED--EMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNV

Query:  FLDFFDQQKHHA
        FLDFF QQ HHA
Subjt:  FLDFFDQQKHHA

TrEMBL top hitse value%identityAlignment
A0A0A0KJX5 Uncharacterized protein9.4e-2969.64Show/hide
Query:  MSKRPRSSETEVALRVDMNRSPT----TSSMSMFGGSESGLGSDVSVESSCLSLWDGEVEED--EMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNV
        MSKR RSSE EV LRV++NRSPT    +SS+S F GS SG  S++SV +SCLS  +GE      E I+TRSMMLVGCPGCFMYVMLT+KSSQCPKCKNNV
Subjt:  MSKRPRSSETEVALRVDMNRSPT----TSSMSMFGGSESGLGSDVSVESSCLSLWDGEVEED--EMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNV

Query:  FLDFFDQQKHHA
        FLDFF QQ HHA
Subjt:  FLDFFDQQKHHA

A0A0L9V640 Uncharacterized protein3.0e-1144.44Show/hide
Query:  MSKRPRSSETEVALRVDMNRSPTTSSMSMFGGSESGLGSDVSV---ESSCLSLWDGEVEEDEMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLD
        MSKR RS   EV+L +   R+ ++ S S      S   S VSV   ESSC+S    E EE     TR+M+LVGCP C MYVML++   +CPKCK+ V LD
Subjt:  MSKRPRSSETEVALRVDMNRSPTTSSMSMFGGSESGLGSDVSV---ESSCLSLWDGEVEEDEMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLD

Query:  FFDQQKHH
        F + ++++
Subjt:  FFDQQKHH

A0A0S3SBW0 Uncharacterized protein3.0e-1144.44Show/hide
Query:  MSKRPRSSETEVALRVDMNRSPTTSSMSMFGGSESGLGSDVSV---ESSCLSLWDGEVEEDEMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLD
        MSKR RS   EV+L +   R+ ++ S S      S   S VSV   ESSC+S    E EE     TR+M+LVGCP C MYVML++   +CPKCK+ V LD
Subjt:  MSKRPRSSETEVALRVDMNRSPTTSSMSMFGGSESGLGSDVSV---ESSCLSLWDGEVEEDEMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLD

Query:  FFDQQKHH
        F + ++++
Subjt:  FFDQQKHH

A0A1S3VZ34 uncharacterized protein LOC1067799134.0e-1144.44Show/hide
Query:  MSKRPRSSETEVALRVDMNRSPTTSSMSMFGGSESGLGSDVSV---ESSCLSLWDGEVEEDEMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLD
        MSKR RS   EV+L +   R+ ++ S S      S   S VSV   ESSC+S    E EE     TR+M+LVGCP C MYVML++   +CPKCK+ V LD
Subjt:  MSKRPRSSETEVALRVDMNRSPTTSSMSMFGGSESGLGSDVSV---ESSCLSLWDGEVEEDEMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLD

Query:  FFDQQKHH
        F + ++++
Subjt:  FFDQQKHH

A0A5D3BBS4 Uncharacterized protein5.2e-2767.54Show/hide
Query:  MSKRPRSSETEVALRVDMNRSPTT----SSMSMFGGSESGLGSDVSVESSCLSLWDGEVEED---EMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNN
        MSKR RSSE EV LRV++N+SPTT    SS+S FGGS SG G       SCLS  +GE +     E I+TRSMMLVGCPGCFMYVMLT+KSSQCPKCKNN
Subjt:  MSKRPRSSETEVALRVDMNRSPTT----SSMSMFGGSESGLGSDVSVESSCLSLWDGEVEED---EMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNN

Query:  VFLDFFDQQ-KHHA
        VFLDFF QQ +HHA
Subjt:  VFLDFFDQQ-KHHA

SwissProt top hitse value%identityAlignment
Q9FMS4 Protein salt-induced and EIN3/EIL1-dependent 12.0e-0439.68Show/hide
Query:  LGSDVSVESSCLSLWDGEVEEDEMIVTRSMMLVGCPGCFMYVMLT-DKSSQCPKCKNNVFLDF
        L S +  ESS  SL   E E       +SM++VGCP C MY++ + +   +CP+C ++V LDF
Subjt:  LGSDVSVESSCLSLWDGEVEEDEMIVTRSMMLVGCPGCFMYVMLT-DKSSQCPKCKNNVFLDF

Q9FNI1 Protein GL2-INTERACTING REPRESSOR 12.5e-1042.16Show/hide
Query:  LRVDMNRSPTTSSMSMF--GGSESGLGSDVSVESSCLSLWDGEVEEDEMIV-------TRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFFDQQKH
        L + +N SP TSS        S S   S  S  SSC+S    E+ +DE  V       T SM+LVGCP C MYVML++   +CPKCK+ V LDF  +   
Subjt:  LRVDMNRSPTTSSMSMF--GGSESGLGSDVSVESSCLSLWDGEVEEDEMIV-------TRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFFDQQKH

Query:  HA
        +A
Subjt:  HA

Q9SRN4 Protein GL2-INTERACTING REPRESSOR 23.2e-1039.58Show/hide
Query:  RSSETEVALRVDMNRSPTTSSMSMFGGSESGLGSDVSVESSCLSLWDGEVEEDEMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFFDQ
        R ++    L + +N SP  S  S      S   S+ +  SSC+S    E  ++E     SM+LVGCP C MYVML+D   +CPKCK+ V LDF  +
Subjt:  RSSETEVALRVDMNRSPTTSSMSMFGGSESGLGSDVSVESSCLSLWDGEVEEDEMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFFDQ

Arabidopsis top hitse value%identityAlignment
AT3G11600.1 unknown protein2.3e-1139.58Show/hide
Query:  RSSETEVALRVDMNRSPTTSSMSMFGGSESGLGSDVSVESSCLSLWDGEVEEDEMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFFDQ
        R ++    L + +N SP  S  S      S   S+ +  SSC+S    E  ++E     SM+LVGCP C MYVML+D   +CPKCK+ V LDF  +
Subjt:  RSSETEVALRVDMNRSPTTSSMSMFGGSESGLGSDVSVESSCLSLWDGEVEEDEMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFFDQ

AT3G52561.1 unknown protein6.1e-0436.11Show/hide
Query:  RSPTTSSMSMFGGSESGLGSDVSVESSCLSLWDGEVEEDEMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCK
        RSP++ + S      S L     V+    S W  E E  EM+V      +GC  C MYVM+  +  +CPKCK
Subjt:  RSPTTSSMSMFGGSESGLGSDVSVESSCLSLWDGEVEEDEMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCK

AT5G06270.1 unknown protein1.8e-1142.16Show/hide
Query:  LRVDMNRSPTTSSMSMF--GGSESGLGSDVSVESSCLSLWDGEVEEDEMIV-------TRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFFDQQKH
        L + +N SP TSS        S S   S  S  SSC+S    E+ +DE  V       T SM+LVGCP C MYVML++   +CPKCK+ V LDF  +   
Subjt:  LRVDMNRSPTTSSMSMF--GGSESGLGSDVSVESSCLSLWDGEVEEDEMIV-------TRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFFDQQKH

Query:  HA
        +A
Subjt:  HA

AT5G22270.1 unknown protein1.4e-0539.68Show/hide
Query:  LGSDVSVESSCLSLWDGEVEEDEMIVTRSMMLVGCPGCFMYVMLT-DKSSQCPKCKNNVFLDF
        L S +  ESS  SL   E E       +SM++VGCP C MY++ + +   +CP+C ++V LDF
Subjt:  LGSDVSVESSCLSLWDGEVEEDEMIVTRSMMLVGCPGCFMYVMLT-DKSSQCPKCKNNVFLDF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCAAGAGGCCGAGAAGTAGCGAGACCGAGGTTGCCTTGAGAGTGGACATGAACCGCTCGCCAACGACGTCGTCGATGAGCATGTTTGGAGGATCAGAGTCG
GGATTGGGGTCGGATGTGTCAGTGGAGAGTTCTTGCTTGTCGTTGTGGGATGGGGAAGTGGAGGAGGACGAGATGATAGTAACGAGATCGATGATGCTTGTTGGG
TGTCCTGGGTGCTTCATGTACGTGATGCTGACCGACAAGAGCTCCCAATGTCCCAAATGCAAGAACAACGTGTTTCTTGATTTCTTCGACCAACAAAAACATCAT
GCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCAAGAGGCCGAGAAGTAGCGAGACCGAGGTTGCCTTGAGAGTGGACATGAACCGCTCGCCAACGACGTCGTCGATGAGCATGTTTGGAGGATCAGAGTCG
GGATTGGGGTCGGATGTGTCAGTGGAGAGTTCTTGCTTGTCGTTGTGGGATGGGGAAGTGGAGGAGGACGAGATGATAGTAACGAGATCGATGATGCTTGTTGGG
TGTCCTGGGTGCTTCATGTACGTGATGCTGACCGACAAGAGCTCCCAATGTCCCAAATGCAAGAACAACGTGTTTCTTGATTTCTTCGACCAACAAAAACATCAT
GCCTAG
Protein sequenceShow/hide protein sequence
MSKRPRSSETEVALRVDMNRSPTTSSMSMFGGSESGLGSDVSVESSCLSLWDGEVEEDEMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFFDQQKHH
A