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CmoCh02G013730 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G013730
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionflagellar radial spoke protein 5 isoform X1
Genome locationCmo_Chr02:8140164..8141871
RNA-Seq ExpressionCmoCh02G013730
SyntenyCmoCh02G013730
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7035942.1 hypothetical protein SDJN02_02742, partial [Cucurbita argyrosperma subsp. argyrosperma]9.6e-2894.03Show/hide
Query:  MYYGVKWQVLNAIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQCTLTKWVPPSVKMTISYVR
        MYYGV+WQVLN IWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQ  LTKWVPPSVKMTISYVR
Subjt:  MYYGVKWQVLNAIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQCTLTKWVPPSVKMTISYVR

PQQ06354.1 flagellar radial spoke protein 5 isoform X1 [Prunus yedoensis var. nudiflora]5.1e-1354.02Show/hide
Query:  QVLNAIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQC---------------------------TLTKWVPPSVKMTISYVR
        +VLN +WQ+SGG GRID D+ VEAMLRYADAGLSTFDMAD                              LTKWVPP VKMT SYVR
Subjt:  QVLNAIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQC---------------------------TLTKWVPPSVKMTISYVR

XP_017427911.1 PREDICTED: L-glyceraldehyde 3-phosphate reductase-like isoform X1 [Vigna angularis]5.1e-1354.02Show/hide
Query:  QVLNAIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMAD----------------QCT-----------LTKWVPPSVKMTISYVR
        +VLN +WQ+SGG GRID D+ VEAMLRYADAGLSTFDMAD                +C            LTKWVPP VKMT SYV+
Subjt:  QVLNAIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMAD----------------QCT-----------LTKWVPPSVKMTISYVR

XP_021278876.1 flagellar radial spoke protein 5 isoform X1 [Herrania umbratica]5.1e-1354.02Show/hide
Query:  QVLNAIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQC---------------------------TLTKWVPPSVKMTISYVR
        +VLN +WQ+SGG GRID D+ VEAMLRYADAGLSTFDMAD                              LTKWVPP VKMT SYVR
Subjt:  QVLNAIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQC---------------------------TLTKWVPPSVKMTISYVR

XP_022943505.1 flagellar radial spoke protein 5 isoform X1 [Cucurbita moschata]5.1e-1354.02Show/hide
Query:  QVLNAIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQC---------------------------TLTKWVPPSVKMTISYVR
        +VLN +WQ+SGG GRID D+ VEAMLRYADAGLSTFDMAD                              LTKWVPP VKMT SYVR
Subjt:  QVLNAIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQC---------------------------TLTKWVPPSVKMTISYVR

TrEMBL top hitse value%identityAlignment
A0A2I4GKU2 1-deoxyxylulose-5-phosphate synthase YajO2.5e-1354.02Show/hide
Query:  QVLNAIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQC---------------------------TLTKWVPPSVKMTISYVR
        +VLN +WQ+SGG GRID D+ VEAMLRYADAGLSTFDMAD                              LTKWVPP VKMT SYVR
Subjt:  QVLNAIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQC---------------------------TLTKWVPPSVKMTISYVR

A0A314Z9P2 Flagellar radial spoke protein 5 isoform X12.5e-1354.02Show/hide
Query:  QVLNAIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQC---------------------------TLTKWVPPSVKMTISYVR
        +VLN +WQ+SGG GRID D+ VEAMLRYADAGLSTFDMAD                              LTKWVPP VKMT SYVR
Subjt:  QVLNAIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQC---------------------------TLTKWVPPSVKMTISYVR

A0A6J0ZW23 flagellar radial spoke protein 5 isoform X52.5e-1354.02Show/hide
Query:  QVLNAIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQC---------------------------TLTKWVPPSVKMTISYVR
        +VLN +WQ+SGG GRID D+ VEAMLRYADAGLSTFDMAD                              LTKWVPP VKMT SYVR
Subjt:  QVLNAIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQC---------------------------TLTKWVPPSVKMTISYVR

A0A6J0ZWD4 flagellar radial spoke protein 5 isoform X12.5e-1354.02Show/hide
Query:  QVLNAIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQC---------------------------TLTKWVPPSVKMTISYVR
        +VLN +WQ+SGG GRID D+ VEAMLRYADAGLSTFDMAD                              LTKWVPP VKMT SYVR
Subjt:  QVLNAIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQC---------------------------TLTKWVPPSVKMTISYVR

M5VYN0 Aldo_ket_red domain-containing protein2.5e-1354.02Show/hide
Query:  QVLNAIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQC---------------------------TLTKWVPPSVKMTISYVR
        +VLN +WQ+SGG GRID D+ VEAMLRYADAGLSTFDMAD                              LTKWVPP VKMT SYVR
Subjt:  QVLNAIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQC---------------------------TLTKWVPPSVKMTISYVR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G27680.1 NAD(P)-linked oxidoreductase superfamily protein2.6e-1548.28Show/hide
Query:  QVLNAIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQC---------------------------TLTKWVPPSVKMTISYVR
        +VLN +WQ+SGG G+ID ++ V++MLRYADAGLSTFDMAD                              LTKWVPP +KMT SYVR
Subjt:  QVLNAIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQC---------------------------TLTKWVPPSVKMTISYVR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATTACGGTGTCAAATGGCAAGTGCTCAACGCAATATGGCAGTCCAGCGGAGGAAGGGGGAGAATCGACTGTGACAATAGGGTGGAGGCTATGCTCCGATATGCCGA
CGCCGGACTTTCAACCTTCGACATGGCCGACCAGTGTACGCTTACAAAATGGGTGCCACCGTCGGTGAAGATGACTATTAGCTATGTCCGGGTATGGAACTGTAATGGTA
TGGAACTGGAACTGGACCTTCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTATTACGGTGTCAAATGGCAAGTGCTCAACGCAATATGGCAGTCCAGCGGAGGAAGGGGGAGAATCGACTGTGACAATAGGGTGGAGGCTATGCTCCGATATGCCGA
CGCCGGACTTTCAACCTTCGACATGGCCGACCAGTGTACGCTTACAAAATGGGTGCCACCGTCGGTGAAGATGACTATTAGCTATGTCCGGGTATGGAACTGTAATGGTA
TGGAACTGGAACTGGACCTTCATTAAATACTCCCTCCCTGCAAAAGTACAAAAGGGTATGATTAATTATCTTTTATTTTTTACCTTAATGATATTTAT
Protein sequenceShow/hide protein sequence
MYYGVKWQVLNAIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQCTLTKWVPPSVKMTISYVRVWNCNGMELELDLH