CuGenDBv2

Gene ID	CmoCh02G014600
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	DET1- and DDB1-associated protein 1
Genome location	Cmo_Chr02:8586242..8588709
RNA-Seq Expression	CmoCh02G014600
Synteny	CmoCh02G014600
Gene Ontology terms	GO:0009788 - negative regulation of abscisic acid-activated signaling pathway (biological process) GO:0032436 - positive regulation of proteasomal ubiquitin-dependent protein catabolic process (biological process) GO:0005634 - nucleus (cellular component) GO:0080008 - Cul4-RING E3 ubiquitin ligase complex (cellular component)
InterPro domains	IPR018276 - DET1- and DDB1-associated protein 1, N-terminal IPR033575 - DET1- and DDB1-associated protein 1

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6606071.1 DET1- and DDB1-associated protein 1, partial [Cucurbita argyrosperma subsp. sororia]

2.8e-45

97.89

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Query:  MLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPLDQVINTEPKNILLRHIYQHTEQKSRTKRPAVEHPMPEHGSKQPRASTANTSN
        MLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPLDQVINTEPKNILLRHIYQHT +KSRTKRPAVEHPMPEHGSKQPRASTANTSN
Subjt:  MLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPLDQVINTEPKNILLRHIYQHTEQKSRTKRPAVEHPMPEHGSKQPRASTANTSN

XP_004143885.1 DET1- and DDB1-associated protein 1 isoform X1 [Cucumis sativus]

8.0e-45

93.88

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Query:  MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPLDQVINTEPKNILLRHIYQHTEQKSRTKRPAVEHPMPEHGSKQPRASTANTSN
        MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPP DQVINTE KNIL+RHIYQHTE+KSRTKRPA EHPMPEHGSKQPRAST NTSN
Subjt:  MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPLDQVINTEPKNILLRHIYQHTEQKSRTKRPAVEHPMPEHGSKQPRASTANTSN

XP_022958597.1 DET1- and DDB1-associated protein 1-like [Cucurbita moschata]

4.5e-48

100

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Query:  MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPLDQVINTEPKNILLRHIYQHTEQKSRTKRPAVEHPMPEHGSKQPRASTANTSN
        MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPLDQVINTEPKNILLRHIYQHTEQKSRTKRPAVEHPMPEHGSKQPRASTANTSN
Subjt:  MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPLDQVINTEPKNILLRHIYQHTEQKSRTKRPAVEHPMPEHGSKQPRASTANTSN

XP_022995550.1 DET1- and DDB1-associated protein 1-like [Cucurbita maxima]

2.9e-47

97.96

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Query:  MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPLDQVINTEPKNILLRHIYQHTEQKSRTKRPAVEHPMPEHGSKQPRASTANTSN
        MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPLDQVINTEP+NILLRHIYQHTEQKSRTKRPA EHPMPEHGSKQPRASTANTSN
Subjt:  MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPLDQVINTEPKNILLRHIYQHTEQKSRTKRPAVEHPMPEHGSKQPRASTANTSN

XP_023532116.1 DET1- and DDB1-associated protein 1-like isoform X2 [Cucurbita pepo subsp. pepo]

4.3e-46

98.98

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Query:  MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPLDQVINTEPKNILLRHIYQHTEQKSRTKRPAVEHPMPEHGSKQPRASTANTSN
        MGSMLGDLPSYDPHNFSQLRPSDPSTPS MIPATYHPTHSRTLPPLDQVINTEPKNILLRHIYQHTEQKSRTKRPAVEHPMPEHGSKQPRASTANTSN
Subjt:  MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPLDQVINTEPKNILLRHIYQHTEQKSRTKRPAVEHPMPEHGSKQPRASTANTSN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KKG6 DET1- and DDB1-associated protein 1

3.9e-45

93.88

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Query:  MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPLDQVINTEPKNILLRHIYQHTEQKSRTKRPAVEHPMPEHGSKQPRASTANTSN
        MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPP DQVINTE KNIL+RHIYQHTE+KSRTKRPA EHPMPEHGSKQPRAST NTSN
Subjt:  MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPLDQVINTEPKNILLRHIYQHTEQKSRTKRPAVEHPMPEHGSKQPRASTANTSN

A0A1S3AUC0 DET1- and DDB1-associated protein 1

3.9e-45

93.88

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Query:  MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPLDQVINTEPKNILLRHIYQHTEQKSRTKRPAVEHPMPEHGSKQPRASTANTSN
        MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPP DQVINTE KNIL+RHIYQHTE+KSRTKRPA EHPMPEHGSKQPRAST NTSN
Subjt:  MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPLDQVINTEPKNILLRHIYQHTEQKSRTKRPAVEHPMPEHGSKQPRASTANTSN

A0A6J1DSK3 DET1- and DDB1-associated protein 1

7.3e-44

91.84

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Query:  MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPLDQVINTEPKNILLRHIYQHTEQKSRTKRPAVEHPMPEHGSKQPRASTANTSN
        MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPP DQVINTE KNIL+RHIYQHT +KSRTKRPA EHP+PEHGSKQPRAST NTSN
Subjt:  MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPLDQVINTEPKNILLRHIYQHTEQKSRTKRPAVEHPMPEHGSKQPRASTANTSN

A0A6J1H293 DET1- and DDB1-associated protein 1

2.2e-48

100

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Query:  MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPLDQVINTEPKNILLRHIYQHTEQKSRTKRPAVEHPMPEHGSKQPRASTANTSN
        MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPLDQVINTEPKNILLRHIYQHTEQKSRTKRPAVEHPMPEHGSKQPRASTANTSN
Subjt:  MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPLDQVINTEPKNILLRHIYQHTEQKSRTKRPAVEHPMPEHGSKQPRASTANTSN

A0A6J1K4A1 DET1- and DDB1-associated protein 1

1.4e-47

97.96

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Query:  MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPLDQVINTEPKNILLRHIYQHTEQKSRTKRPAVEHPMPEHGSKQPRASTANTSN
        MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPLDQVINTEP+NILLRHIYQHTEQKSRTKRPA EHPMPEHGSKQPRASTANTSN
Subjt:  MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPLDQVINTEPKNILLRHIYQHTEQKSRTKRPAVEHPMPEHGSKQPRASTANTSN

SwissProt top hits

e value

%identity

Alignment

Q9FFS4 DET1- and DDB1-associated protein 1

6.4e-29

64.95

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Query:  MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPLDQVINTEPKNILLRHIYQHTEQKSRTKRPAVEHPMPEHGSKQPRASTANTS
        M S+LGDLPS+DPHNFSQ RPSDPS PSKM+P TY PTH+RTLPP DQVI TE KNIL+R  YQ  E+K R KRPA +H   EH +K  RA+++++S
Subjt:  MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPLDQVINTEPKNILLRHIYQHTEQKSRTKRPAVEHPMPEHGSKQPRASTANTS

Arabidopsis top hits

e value

%identity

Alignment

AT5G41560.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin ligase, Det1/DDB1-complexing (InterPro:IPR018276); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

4.6e-30

64.95

Show/hide

Query:  MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPLDQVINTEPKNILLRHIYQHTEQKSRTKRPAVEHPMPEHGSKQPRASTANTS
        M S+LGDLPS+DPHNFSQ RPSDPS PSKM+P TY PTH+RTLPP DQVI TE KNIL+R  YQ  E+K R KRPA +H   EH +K  RA+++++S
Subjt:  MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPLDQVINTEPKNILLRHIYQHTEQKSRTKRPAVEHPMPEHGSKQPRASTANTS

Sequences

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CDS sequence

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ATGGGGTCTATGCTCGGTGACTTGCCGTCATATGATCCTCACAACTTCAGCCAACTCCGACCCTCCGATCCTTCAACTCCTTCTAAGATGATTCCAGCAACCTATCATCC
TACCCACAGCAGGACCCTTCCACCACTGGATCAGGTTATAAATACTGAGCCAAAAAATATACTTCTACGACACATTTATCAGCATACAGAACAAAAGTCAAGAACAAAGA
GACCTGCAGTCGAGCATCCGATGCCCGAGCACGGAAGCAAGCAACCAAGAGCATCTACTGCCAACACTTCAAATTGA

mRNA sequence

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CGACTCCACCGGTTGTGATTCCAATGGCGCTGTGACTCCGAAATGACTCGCTTCTCTTCCTCTTCCCTCTATTTCTAACGTAAATTCAGCGGCATTTTGATGGGGTCTAT
GCTCGGTGACTTGCCGTCATATGATCCTCACAACTTCAGCCAACTCCGACCCTCCGATCCTTCAACTCCTTCTAAGATGATTCCAGCAACCTATCATCCTACCCACAGCA
GGACCCTTCCACCACTGGATCAGGTTATAAATACTGAGCCAAAAAATATACTTCTACGACACATTTATCAGCATACAGAACAAAAGTCAAGAACAAAGAGACCTGCAGTC
GAGCATCCGATGCCCGAGCACGGAAGCAAGCAACCAAGAGCATCTACTGCCAACACTTCAAATTGAGCCTTGGAGGGCAGTTTCTTCCAACAATGTAAAATCTTTCTATG
TTGTGAAATATGTGTTCTGTATAATGAGAGCAAATTGCCTGCTCAGTGGCCGCCGGAGAAGAAACAGCTCGGCCCGACATTTAAATGCTGTATATAGATTTTACTCCTTG
CTAAACTCAGCCACACCAAATTGTTCTCAAAATCATTAACTCGGTTGAACAATTGTAACTAATATGAGTGTGCTTCCAAACAAGAACAGTTCAC

Protein sequence

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MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPLDQVINTEPKNILLRHIYQHTEQKSRTKRPAVEHPMPEHGSKQPRASTANTSN

CmoCh02G014600 (gene) of Cucurbita moschata (Rifu) v1 genome