; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh02G014620 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G014620
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description40S ribosomal protein S10-like
Genome locationCmo_Chr02:8595893..8597551
RNA-Seq ExpressionCmoCh02G014620
SyntenyCmoCh02G014620
Gene Ontology termsGO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR005326 - Plectin/S10, N-terminal
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR037447 - 40S Ribosomal protein S10


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606072.1 40S ribosomal protein S10-2, partial [Cucurbita argyrosperma subsp. sororia]6.9e-9598.88Show/hide
Query:  MIIPEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIIPEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIIPEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPSGDRPRPSRFDGERRFGGDRDGYRGGPRGSGGDFGDKGGAPADYRPSFGGPGGRSGFGRGAGGYGGAPAPSNLE
        PFGGPSGDRPRPSRFDGERRFGGDRDGYRGGPRG+GGDFGDKGGAPADYRPSFGGPGGR GFGRGAGGYGGAPAPSNLE
Subjt:  PFGGPSGDRPRPSRFDGERRFGGDRDGYRGGPRGSGGDFGDKGGAPADYRPSFGGPGGRSGFGRGAGGYGGAPAPSNLE

KAG7036018.1 40S ribosomal protein S10-2, partial [Cucurbita argyrosperma subsp. argyrosperma]6.9e-9598.88Show/hide
Query:  MIIPEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIIPEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIIPEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPSGDRPRPSRFDGERRFGGDRDGYRGGPRGSGGDFGDKGGAPADYRPSFGGPGGRSGFGRGAGGYGGAPAPSNLE
        PFGGPSGDRPRPSRFDGERRFGGDRDGYRGGPRG+GGDFGDKGGAPADYRPSFGGPGGR GFGRGAGGYGGAPAPSNLE
Subjt:  PFGGPSGDRPRPSRFDGERRFGGDRDGYRGGPRGSGGDFGDKGGAPADYRPSFGGPGGRSGFGRGAGGYGGAPAPSNLE

XP_022958538.1 uncharacterized protein LOC111459741 [Cucurbita moschata]8.2e-96100Show/hide
Query:  MIIPEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIIPEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIIPEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPSGDRPRPSRFDGERRFGGDRDGYRGGPRGSGGDFGDKGGAPADYRPSFGGPGGRSGFGRGAGGYGGAPAPSNLE
        PFGGPSGDRPRPSRFDGERRFGGDRDGYRGGPRGSGGDFGDKGGAPADYRPSFGGPGGRSGFGRGAGGYGGAPAPSNLE
Subjt:  PFGGPSGDRPRPSRFDGERRFGGDRDGYRGGPRGSGGDFGDKGGAPADYRPSFGGPGGRSGFGRGAGGYGGAPAPSNLE

XP_022996096.1 uncharacterized protein LOC111491412 [Cucurbita maxima]3.1e-9599.44Show/hide
Query:  MIIPEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIIPEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIIPEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPSGDRPRPSRFDGERRFGGDRDGYRGGPRGSGGDFGDKGGAPADYRPSFGGPGGRSGFGRGAGGYGGAPAPSNLE
        PFGGPSGDRPRPSRFDGERRFGGDRDGYRGGPRGSGGDFGDKGGAPADYRPSFGGPGGR GFGRGAGGYGGAPAPSNLE
Subjt:  PFGGPSGDRPRPSRFDGERRFGGDRDGYRGGPRGSGGDFGDKGGAPADYRPSFGGPGGRSGFGRGAGGYGGAPAPSNLE

XP_023532978.1 uncharacterized protein LOC111794992 [Cucurbita pepo subsp. pepo]3.1e-9599.44Show/hide
Query:  MIIPEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIIPEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIIPEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPSGDRPRPSRFDGERRFGGDRDGYRGGPRGSGGDFGDKGGAPADYRPSFGGPGGRSGFGRGAGGYGGAPAPSNLE
        PFGGPSGDRPRPSRFDGERRFGGDRDGYRGGPRGSGGDFGDKGGAPADYRPSFGGPGGR GFGRGAGGYGGAPAPSNLE
Subjt:  PFGGPSGDRPRPSRFDGERRFGGDRDGYRGGPRGSGGDFGDKGGAPADYRPSFGGPGGRSGFGRGAGGYGGAPAPSNLE

TrEMBL top hitse value%identityAlignment
A0A0A0KK65 S10_plectin domain-containing protein5.0e-9196.67Show/hide
Query:  MIIPEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIIPEKNR+EISKYLFQEGVCYAKKD+NLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIIPEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPSGDRPR-PSRFDGERRFGGDRDGYRGGPRGSGGDFGDKGGAPADYRPSFGGPGGRSGFGRGAGGYGGAPAPSNLE
        PFGGPSGDRPR PSRFDGERRF GDRDGYRGGPRG GGDFGDKGGAPADYRPSFGGPGGR GFGRGAGGYGGAPAPSNLE
Subjt:  PFGGPSGDRPR-PSRFDGERRFGGDRDGYRGGPRGSGGDFGDKGGAPADYRPSFGGPGGRSGFGRGAGGYGGAPAPSNLE

A0A5A7TIX3 40S ribosomal protein S10-15.0e-9196.67Show/hide
Query:  MIIPEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIIPEKNR+EISKYLFQEGVCYAKKD+NLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIIPEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPSGDRPR-PSRFDGERRFGGDRDGYRGGPRGSGGDFGDKGGAPADYRPSFGGPGGRSGFGRGAGGYGGAPAPSNLE
        PFGGPSGDRPR PSRFDGERRF GDRDGYRGGPRG GGDFGDKGGAPADYRPSFGGPGGR GFGRGAGGYGGAPAPSNLE
Subjt:  PFGGPSGDRPR-PSRFDGERRFGGDRDGYRGGPRGSGGDFGDKGGAPADYRPSFGGPGGRSGFGRGAGGYGGAPAPSNLE

A0A6J1ESX8 40S ribosomal protein S10-1-like1.1e-9096.67Show/hide
Query:  MIIPEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MII EKNRREISKYLFQEGVCYAKKD+NLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIIPEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPSGDRPR-PSRFDGERRFGGDRDGYRGGPRGSGGDFGDKGGAPADYRPSFGGPGGRSGFGRGAGGYGGAPAPSNLE
        PFGGPSGDRPR PSRFDGERRF GDRDGYRGGPRG+GGDFGDKGGAPADYRPSFGGPGGR GFGRGAGGYGGAPAPSNLE
Subjt:  PFGGPSGDRPR-PSRFDGERRFGGDRDGYRGGPRGSGGDFGDKGGAPADYRPSFGGPGGRSGFGRGAGGYGGAPAPSNLE

A0A6J1H3C6 uncharacterized protein LOC1114597414.0e-96100Show/hide
Query:  MIIPEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIIPEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIIPEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPSGDRPRPSRFDGERRFGGDRDGYRGGPRGSGGDFGDKGGAPADYRPSFGGPGGRSGFGRGAGGYGGAPAPSNLE
        PFGGPSGDRPRPSRFDGERRFGGDRDGYRGGPRGSGGDFGDKGGAPADYRPSFGGPGGRSGFGRGAGGYGGAPAPSNLE
Subjt:  PFGGPSGDRPRPSRFDGERRFGGDRDGYRGGPRGSGGDFGDKGGAPADYRPSFGGPGGRSGFGRGAGGYGGAPAPSNLE

A0A6J1K3R8 uncharacterized protein LOC1114914121.5e-9599.44Show/hide
Query:  MIIPEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIIPEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIIPEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPSGDRPRPSRFDGERRFGGDRDGYRGGPRGSGGDFGDKGGAPADYRPSFGGPGGRSGFGRGAGGYGGAPAPSNLE
        PFGGPSGDRPRPSRFDGERRFGGDRDGYRGGPRGSGGDFGDKGGAPADYRPSFGGPGGR GFGRGAGGYGGAPAPSNLE
Subjt:  PFGGPSGDRPRPSRFDGERRFGGDRDGYRGGPRGSGGDFGDKGGAPADYRPSFGGPGGRSGFGRGAGGYGGAPAPSNLE

SwissProt top hitse value%identityAlignment
P0DKK8 40S ribosomal protein S10-11.0e-6976.5Show/hide
Query:  MIIPEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIIP+KNR EI KYLFQEGV YAKKD+NLAKHP+IDVPNLQVIKLMQSFKSKEYVRETF+W +YYWYLTNDGIE LR YLNLPSEIVPATLKK A+P GR
Subjt:  MIIPEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFG-GPSGDRPR-PSRFDGERRFGGDRDGYRGGPRGSGGDF-GDKGGAPADYRPSFGGPGGRSGFGR-GAGGYGGAPAPSNLE
        PFG GP GDRPR P RF+G+R   GDRDGYRGGPRG+ GDF G+KGGAPA+++PSF   GGR GFGR G GG+G  P  S++E
Subjt:  PFG-GPSGDRPR-PSRFDGERRFGGDRDGYRGGPRGSGGDF-GDKGGAPADYRPSFGGPGGRSGFGR-GAGGYGGAPAPSNLE

P0DKK9 40S ribosomal protein S10-21.0e-6976.5Show/hide
Query:  MIIPEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIIP+KNR EI KYLFQEGV YAKKD+NLAKHP+IDVPNLQVIKLMQSFKSKEYVRETF+W +YYWYLTNDGIE LR YLNLPSEIVPATLKK A+P GR
Subjt:  MIIPEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFG-GPSGDRPR-PSRFDGERRFGGDRDGYRGGPRGSGGDF-GDKGGAPADYRPSFGGPGGRSGFGR-GAGGYGGAPAPSNLE
        PFG GP GDRPR P RF+G+R   GDRDGYRGGPRG+ GDF G+KGGAPA+++PSF   GGR GFGR G GG+G  P  S++E
Subjt:  PFG-GPSGDRPR-PSRFDGERRFGGDRDGYRGGPRGSGGDF-GDKGGAPADYRPSFGGPGGRSGFGR-GAGGYGGAPAPSNLE

Q9FFS8 40S ribosomal protein S10-22.6e-6879.67Show/hide
Query:  MIIPEKNRREISKYLFQEGVCYAKKDFNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAG
        MII E NRREISKYLF+EGV +AKKDFNL +HP I+ VPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP G
Subjt:  MIIPEKNRREISKYLFQEGVCYAKKDFNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAG

Query:  RPFGGPSGDRPR-PSRFDGERRFGGDRDGYRGGPRGSGGDFGDKGGAPADYRPSF-GGPGG-RSGFGRGAGGYGGAPAPSNL
        RPFGG  GDRPR P R DGERRF GDRDGYRGGP+ SGG++GDK GAPADY+P F GG GG R GFGRGAGG+GG  A S+L
Subjt:  RPFGGPSGDRPR-PSRFDGERRFGGDRDGYRGGPRGSGGDFGDKGGAPADYRPSF-GGPGG-RSGFGRGAGGYGGAPAPSNL

Q9LTF2 40S ribosomal protein S10-31.8e-6677.4Show/hide
Query:  MIIPEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MII E NR+EI KYLF+EGVC+AKKDFNLAKHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GR
Subjt:  MIIPEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPSGDRPRPSRFD-GERRFGGDRDGYRGGPRGSGGDFGDKGGAPADYRPSFGGPGGRSGFGRGAGGYGGAPAPS
        PFGGP GDR R  R + G+R   GDRDGYR GPR  G   G+KGGAPADY+PSF G G   GFGRGAGGY  A APS
Subjt:  PFGGPSGDRPRPSRFD-GERRFGGDRDGYRGGPRGSGGDFGDKGGAPADYRPSFGGPGGRSGFGRGAGGYGGAPAPS

Q9SW09 40S ribosomal protein S10-11.8e-6980.23Show/hide
Query:  MIIPEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MII E NRREI KYLF+EGVC+AKKDFNL KHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GR
Subjt:  MIIPEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPSGDRPR-PSRFDGERRFGGDRDGYRGGPRGSGGDFGDKGGAPADYRPSFGGPGGRSGFGRGAGGYGGAPAPS
        PFGGP GDR R P R DG+R   GDRDGYRGGPR  GGD  +KGGAPAD++PSF G GGR GFGRGAGGY  A APS
Subjt:  PFGGPSGDRPR-PSRFDGERRFGGDRDGYRGGPRGSGGDFGDKGGAPADYRPSFGGPGGRSGFGRGAGGYGGAPAPS

Arabidopsis top hitse value%identityAlignment
AT4G25740.1 RNA binding Plectin/S10 domain-containing protein1.3e-7080.23Show/hide
Query:  MIIPEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MII E NRREI KYLF+EGVC+AKKDFNL KHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GR
Subjt:  MIIPEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPSGDRPR-PSRFDGERRFGGDRDGYRGGPRGSGGDFGDKGGAPADYRPSFGGPGGRSGFGRGAGGYGGAPAPS
        PFGGP GDR R P R DG+R   GDRDGYRGGPR  GGD  +KGGAPAD++PSF G GGR GFGRGAGGY  A APS
Subjt:  PFGGPSGDRPR-PSRFDGERRFGGDRDGYRGGPRGSGGDFGDKGGAPADYRPSFGGPGGRSGFGRGAGGYGGAPAPS

AT4G25740.2 RNA binding Plectin/S10 domain-containing protein1.1e-5869.32Show/hide
Query:  MIIPEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MII E NRREI KYLF+EGVC+AKKDFNL KHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GR
Subjt:  MIIPEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPSGDRPRPSRFDGERRFGGDRDGYRGGPRGSGGDFGDKGGAPADYRPSFGGPGGRSGFGRGAGGYGGAPAPS
        PFGGP                              GGD  +KGGAPAD++PSF G GGR GFGRGAGGY  A APS
Subjt:  PFGGPSGDRPRPSRFDGERRFGGDRDGYRGGPRGSGGDFGDKGGAPADYRPSFGGPGGRSGFGRGAGGYGGAPAPS

AT5G41520.1 RNA binding Plectin/S10 domain-containing protein1.8e-6979.67Show/hide
Query:  MIIPEKNRREISKYLFQEGVCYAKKDFNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAG
        MII E NRREISKYLF+EGV +AKKDFNL +HP I+ VPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP G
Subjt:  MIIPEKNRREISKYLFQEGVCYAKKDFNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAG

Query:  RPFGGPSGDRPR-PSRFDGERRFGGDRDGYRGGPRGSGGDFGDKGGAPADYRPSF-GGPGG-RSGFGRGAGGYGGAPAPSNL
        RPFGG  GDRPR P R DGERRF GDRDGYRGGP+ SGG++GDK GAPADY+P F GG GG R GFGRGAGG+GG  A S+L
Subjt:  RPFGGPSGDRPR-PSRFDGERRFGGDRDGYRGGPRGSGGDFGDKGGAPADYRPSF-GGPGG-RSGFGRGAGGYGGAPAPSNL

AT5G41520.2 RNA binding Plectin/S10 domain-containing protein1.6e-4980.15Show/hide
Query:  MQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPSGDRPR-PSRFDGERRFGGDRDGYRGGPRGSGGDFGDKGG
        MQSFKSKEYVRETFAWMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP GRPFGG  GDRPR P R DGERRF GDRDGYRGGP+ SGG++GDK G
Subjt:  MQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPSGDRPR-PSRFDGERRFGGDRDGYRGGPRGSGGDFGDKGG

Query:  APADYRPSF-GGPGG-RSGFGRGAGGYGGAPAPSNL
        APADY+P F GG GG R GFGRGAGG+GG  A S+L
Subjt:  APADYRPSF-GGPGG-RSGFGRGAGGYGGAPAPSNL

AT5G52650.1 RNA binding Plectin/S10 domain-containing protein1.3e-6777.4Show/hide
Query:  MIIPEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MII E NR+EI KYLF+EGVC+AKKDFNLAKHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GR
Subjt:  MIIPEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPSGDRPRPSRFD-GERRFGGDRDGYRGGPRGSGGDFGDKGGAPADYRPSFGGPGGRSGFGRGAGGYGGAPAPS
        PFGGP GDR R  R + G+R   GDRDGYR GPR  G   G+KGGAPADY+PSF G G   GFGRGAGGY  A APS
Subjt:  PFGGPSGDRPRPSRFD-GERRFGGDRDGYRGGPRGSGGDFGDKGGAPADYRPSFGGPGGRSGFGRGAGGYGGAPAPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTATTCCAGAGAAGAACCGCAGAGAGATCTCCAAGTACCTCTTTCAAGAGGGAGTTTGTTATGCCAAGAAGGACTTTAATCTGGCCAAGCACCCAGAAATCGATGT
GCCTAATTTGCAAGTGATTAAGCTGATGCAGAGTTTCAAGTCTAAGGAGTATGTTCGTGAGACATTTGCTTGGATGCATTACTATTGGTATCTCACGAACGATGGCATTG
AGTTTTTGAGGACTTACCTGAATCTCCCTTCAGAAATTGTCCCGGCTACCTTGAAGAAACAAGCCAAGCCAGCTGGTCGACCATTTGGTGGCCCATCTGGAGACCGCCCA
CGTCCGTCAAGATTTGACGGAGAAAGAAGATTTGGTGGCGATCGGGATGGCTACCGTGGTGGTCCTCGTGGGTCTGGTGGTGATTTTGGTGACAAGGGTGGAGCTCCTGC
TGATTACAGACCTTCATTCGGGGGACCTGGTGGAAGGTCTGGCTTTGGGCGTGGAGCTGGTGGCTATGGAGGAGCACCGGCACCCTCAAATCTTGAATGA
mRNA sequenceShow/hide mRNA sequence
GGCTTTACGCTGTGAAGGAAGATAGTGAAAGGGTTTCTTTGTAGCTGCCGATTCTTCCGCCCGCGCCGTCGCCGATCACTTCGTCAAAATGATTATTCCAGAGAAGAACC
GCAGAGAGATCTCCAAGTACCTCTTTCAAGAGGGAGTTTGTTATGCCAAGAAGGACTTTAATCTGGCCAAGCACCCAGAAATCGATGTGCCTAATTTGCAAGTGATTAAG
CTGATGCAGAGTTTCAAGTCTAAGGAGTATGTTCGTGAGACATTTGCTTGGATGCATTACTATTGGTATCTCACGAACGATGGCATTGAGTTTTTGAGGACTTACCTGAA
TCTCCCTTCAGAAATTGTCCCGGCTACCTTGAAGAAACAAGCCAAGCCAGCTGGTCGACCATTTGGTGGCCCATCTGGAGACCGCCCACGTCCGTCAAGATTTGACGGAG
AAAGAAGATTTGGTGGCGATCGGGATGGCTACCGTGGTGGTCCTCGTGGGTCTGGTGGTGATTTTGGTGACAAGGGTGGAGCTCCTGCTGATTACAGACCTTCATTCGGG
GGACCTGGTGGAAGGTCTGGCTTTGGGCGTGGAGCTGGTGGCTATGGAGGAGCACCGGCACCCTCAAATCTTGAATGAGAGAACATCAATAGGTTTATGGGGAGTGTTTT
TGTTGTTAGTTTTAGTTTCTAAACAAAATGAACTGCAGATCTTGAATCAAACTCATGAGATTATATCAGTTTTGCTTGCCTATAATTAATTGTCGGATTTTTTTCATTGC
TGAAGTTTGTTTGAACTCCCTTGCTGATCCCCAAAATTCAATTCTCACTATTTTTAG
Protein sequenceShow/hide protein sequence
MIIPEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPSGDRP
RPSRFDGERRFGGDRDGYRGGPRGSGGDFGDKGGAPADYRPSFGGPGGRSGFGRGAGGYGGAPAPSNLE